RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 FAM74A3Q4VXF1 159 aa8.13□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 NAT8BQ9UHF3 227 aa8.13□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 A0A087WYN8 130 aa8.12□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 LINC00959A0A1B0GUT2 108 aa8.12□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 C7orf77A4D0Y5 90 aa8.12□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 COX6A2Q02221 97 aa8.12□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 FOXI1Q12951 378 aa8.12□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 CIRBPQ14011 172 aaKnown RBP8.12□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 NAT8Q9UHE5 227 aa8.12□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 IGKV2-24A0A0C4DH68 120 aa8.11□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 TRBV27A0A0K0K1C4 114 aa8.11□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 CAMPP49913 170 aa8.11□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 PEA15Q15121 130 aa8.11□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 SS18Q15532 418 aa8.11□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 SPACA4Q8TDM5 124 aa8.11□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 LINC00526Q96FQ7 95 aa8.11□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 VCYO14598 125 aa8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 OXTP01178 125 aa8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 SUMO2P61956 95 aaKnown RBP8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 MAJINQ3KP22 176 aa8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 MRPL51Q4U2R6 128 aaKnown RBP8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 RNASE13Q5GAN3 156 aaKnown RBP8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 MRPL52Q86TS9 123 aaKnown RBP8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 ZNF664Q8N3J9 261 aa8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 NRACQ8N912 160 aa8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 PRSS3P2Q8NHM4 247 aa8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 SMIM27A0A1W2PRY6 76 aa8.09□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 PPP1R17O96001 155 aa8.09□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 FAM104BQ5XKR9 115 aa8.09□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 KIR2DL4Q99706 377 aa8.09□□□□□ -1.11
TSPAN9-IT1-201ENST00000539784 IGHV1-58A0A0C4DH39 117 aa8.08□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 MRPL54Q6P161 138 aaKnown RBP8.08□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 PPP1R2P9O14990 202 aa8.07□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 CKS2P33552 79 aa8.07□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 CD164L2Q6UWJ8 174 aa8.07□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 CARD19Q96LW7 228 aa8.07□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 A0A096LNI7 61 aa8.06□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 TRAV13-1A0A0B4J241 112 aa8.06□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 ZNF561-AS1K7EIQ3 104 aa8.06□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 PHOX2AO14813 284 aa8.06□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 SMAGPQ0VAQ4 97 aa8.06□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 STPG4Q8N801 248 aa8.06□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 C7orf33Q8WU49 177 aa8.06□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 PLAC8Q9NZF1 115 aa8.06□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 UBE2D4Q9Y2X8 147 aa8.06□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 A0A1B0GW15 77 aa8.05□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 MALP21145 153 aa8.05□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 HBBP68871 147 aa8.05□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 Q6ZUT4 128 aa8.05□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 SMDT1Q9H4I9 107 aa8.05□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 LINC00862A6NCI5 91 aa8.04□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 C1orf196B1AJZ1 125 aa8.04□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 D6R8Y8 96 aa8.04□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 TMEM18Q96B42 140 aa8.04□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 C20orf78Q9BR46 151 aa8.04□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 F8W036 122 aa8.03□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 COX7A2LO14548 114 aa8.03□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 S100A8P05109 93 aa8.03□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 RPL39P62891 51 aaKnown RBP8.03□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 C5orf38Q86SI9 138 aa8.03□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
TSPAN9-IT1-201ENST00000539784 PKHD1L1Q86WI1 4243 aa8.02□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 IGLV4-69A0A075B6H9 119 aa8.02□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 TRBV24-1A0A075B6N3 115 aa8.02□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 A0A1B0GXF2 115 aa8.02□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 NPYP01303 97 aa8.02□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 SERTAD4-AS1Q5TG53 156 aa8.02□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 PKIGQ9Y2B9 76 aa8.02□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 TCAPO15273 167 aa8.01□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 RPL32P62910 135 aaKnown RBP8.01□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 Q6ZRU5 148 aa8.01□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 OPRPNQ99935 248 aaPredicted RBP8.01□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 TIMM21Q9BVV7 248 aa8.01□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 LINC00474Q9P2X8 69 aa8.01□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 GAGE2BQ13066 116 aa8□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 CAMK2N2Q96S95 79 aa8□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 LOC107984640A0A0U1RRK4 108 aa7.99□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 PPBPP02775 128 aa7.99□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 PRR3P79522 188 aaKnown RBP7.99□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 ORMDL3Q8N138 153 aa7.99□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 PRELID3AQ96N28 172 aa7.99□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 SPANXA1Q9NS26 97 aa7.99□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 APOMO95445 188 aa7.98□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 RAB5AP20339 215 aa7.98□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 PTTG1IPP53801 180 aa7.98□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 SPAG11BQ08648 103 aa7.98□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 TMEM136Q6ZRR5 245 aa7.98□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 IFITM10A6NMD0 228 aa7.97□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 MT1HL1P0DM35 61 aa7.97□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 RAB14P61106 215 aa7.97□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 RPL18AQ02543 176 aaKnown RBP7.97□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 ATP5L2Q7Z4Y8 100 aa7.97□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
TSPAN9-IT1-201ENST00000539784 A0A0J9YXV3 536 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms