RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-212ENST00000539372 NAT8Q9UHE5 227 aa12.16□□□□□ -0.46
TNFRSF1A-212ENST00000539372 NAT8BQ9UHF3 227 aa12.16□□□□□ -0.46
TNFRSF1A-212ENST00000539372 TRBV27A0A0K0K1C4 114 aa12.15□□□□□ -0.46
TNFRSF1A-212ENST00000539372 LINC00959A0A1B0GUT2 108 aa12.14□□□□□ -0.47
TNFRSF1A-212ENST00000539372 HNRNPA3P51991 378 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-212ENST00000539372 PEA15Q15121 130 aa12.14□□□□□ -0.47
TNFRSF1A-212ENST00000539372 A0A087WYN8 130 aa12.13□□□□□ -0.47
TNFRSF1A-212ENST00000539372 C7orf77A4D0Y5 90 aa12.13□□□□□ -0.47
TNFRSF1A-212ENST00000539372 CCL25O15444 150 aa12.13□□□□□ -0.47
TNFRSF1A-212ENST00000539372 NRACQ8N912 160 aa12.13□□□□□ -0.47
TNFRSF1A-212ENST00000539372 SPACA4Q8TDM5 124 aa12.13□□□□□ -0.47
TNFRSF1A-212ENST00000539372 GVQW2A0A096LPI5 108 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-212ENST00000539372 SMIM27A0A1W2PRY6 76 aa12.12□□□□□ -0.47
TNFRSF1A-212ENST00000539372 VCYO14598 125 aa12.12□□□□□ -0.47
TNFRSF1A-212ENST00000539372 FCER1GP30273 86 aa12.12□□□□□ -0.47
TNFRSF1A-212ENST00000539372 CAMPP49913 170 aa12.12□□□□□ -0.47
TNFRSF1A-212ENST00000539372 COX6A2Q02221 97 aa12.12□□□□□ -0.47
TNFRSF1A-212ENST00000539372 MRPL52Q86TS9 123 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-212ENST00000539372 CDC42SE2Q9NRR3 84 aa12.12□□□□□ -0.47
TNFRSF1A-212ENST00000539372 LRP1Q07954 4544 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-212ENST00000539372 SUMO2P61956 95 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-212ENST00000539372 MRPL51Q4U2R6 128 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-212ENST00000539372 FAM104BQ5XKR9 115 aa12.11□□□□□ -0.47
TNFRSF1A-212ENST00000539372 ZNF664Q8N3J9 261 aa12.11□□□□□ -0.47
TNFRSF1A-212ENST00000539372 PPP1R17O96001 155 aa12.1□□□□□ -0.47
TNFRSF1A-212ENST00000539372 SS18Q15532 418 aa12.1□□□□□ -0.47
TNFRSF1A-212ENST00000539372 PRSS3P2Q8NHM4 247 aa12.1□□□□□ -0.47
TNFRSF1A-212ENST00000539372 LINC00526Q96FQ7 95 aa12.1□□□□□ -0.47
TNFRSF1A-212ENST00000539372 IGKV2-24A0A0C4DH68 120 aa12.09□□□□□ -0.47
TNFRSF1A-212ENST00000539372 OXTP01178 125 aa12.09□□□□□ -0.47
TNFRSF1A-212ENST00000539372 PKHD1L1Q86WI1 4243 aa12.09□□□□□ -0.47
TNFRSF1A-212ENST00000539372 RNASE13Q5GAN3 156 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-212ENST00000539372 KIR2DL4Q99706 377 aa12.08□□□□□ -0.48
TNFRSF1A-212ENST00000539372 IGHV1-58A0A0C4DH39 117 aa12.07□□□□□ -0.48
TNFRSF1A-212ENST00000539372 MAJINQ3KP22 176 aa12.07□□□□□ -0.48
TNFRSF1A-212ENST00000539372 MRPL54Q6P161 138 aaKnown RBP12.07□□□□□ -0.48
TNFRSF1A-212ENST00000539372 CD164L2Q6UWJ8 174 aa12.07□□□□□ -0.48
TNFRSF1A-212ENST00000539372 SMDT1Q9H4I9 107 aa12.07□□□□□ -0.48
TNFRSF1A-212ENST00000539372 PLAC8Q9NZF1 115 aa12.07□□□□□ -0.48
TNFRSF1A-212ENST00000539372 UBE2D4Q9Y2X8 147 aa12.07□□□□□ -0.48
TNFRSF1A-212ENST00000539372 PPP1R2P9O14990 202 aa12.06□□□□□ -0.48
TNFRSF1A-212ENST00000539372 FAT3Q8TDW7 4589 aa12.05□□□□□ -0.48
TNFRSF1A-212ENST00000539372 A0A1B0GW15 77 aa12.05□□□□□ -0.48
TNFRSF1A-212ENST00000539372 CKS2P33552 79 aa12.05□□□□□ -0.48
TNFRSF1A-212ENST00000539372 A0A096LNI7 61 aa12.04□□□□□ -0.48
TNFRSF1A-212ENST00000539372 LINC00862A6NCI5 91 aa12.04□□□□□ -0.48
TNFRSF1A-212ENST00000539372 C20orf78Q9BR46 151 aa12.04□□□□□ -0.48
TNFRSF1A-212ENST00000539372 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-212ENST00000539372 TRAV13-1A0A0B4J241 112 aa12.03□□□□□ -0.48
TNFRSF1A-212ENST00000539372 PHOX2AO14813 284 aa12.03□□□□□ -0.48
TNFRSF1A-212ENST00000539372 TNFRSF6BO95407 300 aa12.03□□□□□ -0.48
TNFRSF1A-212ENST00000539372 HBBP68871 147 aa12.03□□□□□ -0.48
TNFRSF1A-212ENST00000539372 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
TNFRSF1A-212ENST00000539372 Q6ZUT4 128 aa12.03□□□□□ -0.48
TNFRSF1A-212ENST00000539372 STPG4Q8N801 248 aa12.03□□□□□ -0.48
TNFRSF1A-212ENST00000539372 CARD19Q96LW7 228 aa12.03□□□□□ -0.48
TNFRSF1A-212ENST00000539372 TRBV24-1A0A075B6N3 115 aa12.02□□□□□ -0.49
TNFRSF1A-212ENST00000539372 C1orf196B1AJZ1 125 aa12.02□□□□□ -0.49
TNFRSF1A-212ENST00000539372 D6R8Y8 96 aa12.02□□□□□ -0.49
TNFRSF1A-212ENST00000539372 ZNF561-AS1K7EIQ3 104 aa12.02□□□□□ -0.49
TNFRSF1A-212ENST00000539372 A0A1B0GXF2 115 aa12.01□□□□□ -0.49
TNFRSF1A-212ENST00000539372 F8W036 122 aa12.01□□□□□ -0.49
TNFRSF1A-212ENST00000539372 S100A8P05109 93 aa12.01□□□□□ -0.49
TNFRSF1A-212ENST00000539372 MALP21145 153 aa12.01□□□□□ -0.49
TNFRSF1A-212ENST00000539372 C7orf33Q8WU49 177 aa12.01□□□□□ -0.49
TNFRSF1A-212ENST00000539372 TMEM18Q96B42 140 aa12.01□□□□□ -0.49
TNFRSF1A-212ENST00000539372 COX7A2LO14548 114 aa12□□□□□ -0.49
TNFRSF1A-212ENST00000539372 NPYP01303 97 aa12□□□□□ -0.49
TNFRSF1A-212ENST00000539372 RPL39P62891 51 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-212ENST00000539372 RPL32P62910 135 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-212ENST00000539372 SYCNQ0VAF6 134 aa12□□□□□ -0.49
TNFRSF1A-212ENST00000539372 SMIM2Q9BVW6 85 aa12□□□□□ -0.49
TNFRSF1A-212ENST00000539372 IGLV4-69A0A075B6H9 119 aa11.99□□□□□ -0.49
TNFRSF1A-212ENST00000539372 TIMM21Q9BVV7 248 aa11.99□□□□□ -0.49
TNFRSF1A-212ENST00000539372 TCAPO15273 167 aa11.98□□□□□ -0.49
TNFRSF1A-212ENST00000539372 Q6ZRU5 148 aa11.98□□□□□ -0.49
TNFRSF1A-212ENST00000539372 C5orf38Q86SI9 138 aa11.98□□□□□ -0.49
TNFRSF1A-212ENST00000539372 LINC00474Q9P2X8 69 aa11.97□□□□□ -0.49
TNFRSF1A-212ENST00000539372 SERTAD4-AS1Q5TG53 156 aa11.96□□□□□ -0.49
TNFRSF1A-212ENST00000539372 OPRPNQ99935 248 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-212ENST00000539372 PKIGQ9Y2B9 76 aa11.96□□□□□ -0.49
TNFRSF1A-212ENST00000539372 PPBPP02775 128 aa11.95□□□□□ -0.5
TNFRSF1A-212ENST00000539372 FAM104AQ969W3 186 aa11.95□□□□□ -0.5
TNFRSF1A-212ENST00000539372 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-212ENST00000539372 GAGE2BQ13066 116 aa11.94□□□□□ -0.5
TNFRSF1A-212ENST00000539372 ATP5L2Q7Z4Y8 100 aa11.94□□□□□ -0.5
TNFRSF1A-212ENST00000539372 ORMDL3Q8N138 153 aa11.94□□□□□ -0.5
TNFRSF1A-212ENST00000539372 CAMK2N2Q96S95 79 aa11.94□□□□□ -0.5
TNFRSF1A-212ENST00000539372 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
TNFRSF1A-212ENST00000539372 TMEM136Q6ZRR5 245 aa11.93□□□□□ -0.5
TNFRSF1A-212ENST00000539372 PRELID3AQ96N28 172 aa11.93□□□□□ -0.5
TNFRSF1A-212ENST00000539372 LOC107984640A0A0U1RRK4 108 aa11.92□□□□□ -0.5
TNFRSF1A-212ENST00000539372 APOMO95445 188 aa11.92□□□□□ -0.5
TNFRSF1A-212ENST00000539372 MT1HL1P0DM35 61 aa11.92□□□□□ -0.5
TNFRSF1A-212ENST00000539372 PTTG1IPP53801 180 aa11.92□□□□□ -0.5
TNFRSF1A-212ENST00000539372 RAB5AP20339 215 aa11.91□□□□□ -0.5
TNFRSF1A-212ENST00000539372 RAB14P61106 215 aa11.91□□□□□ -0.5
TNFRSF1A-212ENST00000539372 MRPS36P82909 103 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-212ENST00000539372 SPAG11BQ08648 103 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms