RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ISOC2Q96AB3 205 aa14.15□□□□□ -0.14
SCARB1-206ENST00000539320 GVQW2A0A096LPI5 108 aaPredicted RBP14.14□□□□□ -0.15
SCARB1-206ENST00000539320 HNRNPA3P51991 378 aaKnown RBP14.14□□□□□ -0.15
SCARB1-206ENST00000539320 POLR2KP53803 58 aaKnown RBP14.14□□□□□ -0.15
SCARB1-206ENST00000539320 RIGQ13278 110 aa14.14□□□□□ -0.15
SCARB1-206ENST00000539320 SLC7A5P1Q8MH63 180 aa14.14□□□□□ -0.15
SCARB1-206ENST00000539320 TRBV27A0A0K0K1C4 114 aa14.13□□□□□ -0.15
SCARB1-206ENST00000539320 FOXI1Q12951 378 aa14.13□□□□□ -0.15
SCARB1-206ENST00000539320 FAM74A3Q4VXF1 159 aa14.13□□□□□ -0.15
SCARB1-206ENST00000539320 NUP35Q8NFH5 326 aa14.13□□□□□ -0.15
SCARB1-206ENST00000539320 A0A087WYN8 130 aa14.12□□□□□ -0.15
SCARB1-206ENST00000539320 C7orf77A4D0Y5 90 aa14.12□□□□□ -0.15
SCARB1-206ENST00000539320 XCL1P47992 114 aa14.12□□□□□ -0.15
SCARB1-206ENST00000539320 TMEM241Q24JQ0 296 aa14.12□□□□□ -0.15
SCARB1-206ENST00000539320 LINC00959A0A1B0GUT2 108 aa14.11□□□□□ -0.15
SCARB1-206ENST00000539320 SMKR1H3BMG3 65 aa14.11□□□□□ -0.15
SCARB1-206ENST00000539320 RPL23P62829 140 aaKnown RBP14.11□□□□□ -0.15
SCARB1-206ENST00000539320 ADIRFQ15847 76 aa14.11□□□□□ -0.15
SCARB1-206ENST00000539320 MRPL52Q86TS9 123 aaKnown RBP14.11□□□□□ -0.15
SCARB1-206ENST00000539320 DPH3Q96FX2 82 aa14.11□□□□□ -0.15
SCARB1-206ENST00000539320 NAT8BQ9UHF3 227 aa14.11□□□□□ -0.15
SCARB1-206ENST00000539320 CCL25O15444 150 aa14.1□□□□□ -0.15
SCARB1-206ENST00000539320 COX6A2Q02221 97 aa14.09□□□□□ -0.15
SCARB1-206ENST00000539320 PLAC8Q9NZF1 115 aa14.09□□□□□ -0.15
SCARB1-206ENST00000539320 PPP1R17O96001 155 aa14.08□□□□□ -0.16
SCARB1-206ENST00000539320 FCER1GP30273 86 aa14.08□□□□□ -0.16
SCARB1-206ENST00000539320 UQCC3Q6UW78 93 aa14.08□□□□□ -0.16
SCARB1-206ENST00000539320 NRACQ8N912 160 aa14.08□□□□□ -0.16
SCARB1-206ENST00000539320 CDC42SE2Q9NRR3 84 aa14.08□□□□□ -0.16
SCARB1-206ENST00000539320 NAT8Q9UHE5 227 aa14.08□□□□□ -0.16
SCARB1-206ENST00000539320 IGHV1-58A0A0C4DH39 117 aa14.07□□□□□ -0.16
SCARB1-206ENST00000539320 VCYO14598 125 aa14.07□□□□□ -0.16
SCARB1-206ENST00000539320 SUMO2P61956 95 aaKnown RBP14.07□□□□□ -0.16
SCARB1-206ENST00000539320 SS18Q15532 418 aa14.07□□□□□ -0.16
SCARB1-206ENST00000539320 PRSS3P2Q8NHM4 247 aa14.07□□□□□ -0.16
SCARB1-206ENST00000539320 SMDT1Q9H4I9 107 aa14.07□□□□□ -0.16
SCARB1-206ENST00000539320 NDUFA5Q16718 116 aa14.06□□□□□ -0.16
SCARB1-206ENST00000539320 ZNF664Q8N3J9 261 aa14.06□□□□□ -0.16
SCARB1-206ENST00000539320 IGKV2-24A0A0C4DH68 120 aa14.05□□□□□ -0.16
SCARB1-206ENST00000539320 HMCN2Q8NDA2 5059 aa14.05□□□□□ -0.16
SCARB1-206ENST00000539320 SMIM27A0A1W2PRY6 76 aa14.04□□□□□ -0.16
SCARB1-206ENST00000539320 PPP1R2P9O14990 202 aa14.04□□□□□ -0.16
SCARB1-206ENST00000539320 SMAGPQ0VAQ4 97 aa14.04□□□□□ -0.16
SCARB1-206ENST00000539320 MAJINQ3KP22 176 aa14.04□□□□□ -0.16
SCARB1-206ENST00000539320 MRPL51Q4U2R6 128 aaKnown RBP14.04□□□□□ -0.16
SCARB1-206ENST00000539320 FAM104BQ5XKR9 115 aa14.04□□□□□ -0.16
SCARB1-206ENST00000539320 CD164L2Q6UWJ8 174 aa14.04□□□□□ -0.16
SCARB1-206ENST00000539320 KIR2DL4Q99706 377 aa14.04□□□□□ -0.16
SCARB1-206ENST00000539320 TMEM218A2RU14 115 aa14.03□□□□□ -0.16
SCARB1-206ENST00000539320 SERTAD4-AS1Q5TG53 156 aa14.03□□□□□ -0.16
SCARB1-206ENST00000539320 C7orf33Q8WU49 177 aa14.03□□□□□ -0.16
SCARB1-206ENST00000539320 PKIGQ9Y2B9 76 aa14.03□□□□□ -0.16
SCARB1-206ENST00000539320 A0A1B0GW15 77 aa14.02□□□□□ -0.17
SCARB1-206ENST00000539320 CAMPP49913 170 aa14.02□□□□□ -0.17
SCARB1-206ENST00000539320 LINC00526Q96FQ7 95 aa14.02□□□□□ -0.17
SCARB1-206ENST00000539320 CARD19Q96LW7 228 aa14.02□□□□□ -0.17
SCARB1-206ENST00000539320 UBE2D4Q9Y2X8 147 aa14.02□□□□□ -0.17
SCARB1-206ENST00000539320 A0A096LNI7 61 aa14.01□□□□□ -0.17
SCARB1-206ENST00000539320 F8W036 122 aa14.01□□□□□ -0.17
SCARB1-206ENST00000539320 PHOX2AO14813 284 aa14.01□□□□□ -0.17
SCARB1-206ENST00000539320 CSDC2Q9Y534 153 aaKnown RBP14.01□□□□□ -0.17
SCARB1-206ENST00000539320 ADCYAP1P18509 176 aa14□□□□□ -0.17
SCARB1-206ENST00000539320 Q6ZRU5 148 aa14□□□□□ -0.17
SCARB1-206ENST00000539320 STPG4Q8N801 248 aa14□□□□□ -0.17
SCARB1-206ENST00000539320 ZNF561-AS1K7EIQ3 104 aa13.99□□□□□ -0.17
SCARB1-206ENST00000539320 C20orf78Q9BR46 151 aa13.99□□□□□ -0.17
SCARB1-206ENST00000539320 C1orf196B1AJZ1 125 aa13.98□□□□□ -0.17
SCARB1-206ENST00000539320 CKS2P33552 79 aa13.98□□□□□ -0.17
SCARB1-206ENST00000539320 RNASE13Q5GAN3 156 aaKnown RBP13.98□□□□□ -0.17
SCARB1-206ENST00000539320 Q6ZUT4 128 aa13.98□□□□□ -0.17
SCARB1-206ENST00000539320 TMEM18Q96B42 140 aa13.98□□□□□ -0.17
SCARB1-206ENST00000539320 LINC00474Q9P2X8 69 aa13.98□□□□□ -0.17
SCARB1-206ENST00000539320 S100A8P05109 93 aa13.97□□□□□ -0.17
SCARB1-206ENST00000539320 RPL32P62910 135 aaKnown RBP13.97□□□□□ -0.17
SCARB1-206ENST00000539320 SYCNQ0VAF6 134 aa13.97□□□□□ -0.17
SCARB1-206ENST00000539320 MRPL54Q6P161 138 aaKnown RBP13.97□□□□□ -0.17
SCARB1-206ENST00000539320 TIMM21Q9BVV7 248 aa13.97□□□□□ -0.17
SCARB1-206ENST00000539320 TRBV24-1A0A075B6N3 115 aa13.96□□□□□ -0.17
SCARB1-206ENST00000539320 TRAV13-1A0A0B4J241 112 aa13.96□□□□□ -0.17
SCARB1-206ENST00000539320 COX7A2LO14548 114 aa13.96□□□□□ -0.17
SCARB1-206ENST00000539320 MALP21145 153 aa13.96□□□□□ -0.17
SCARB1-206ENST00000539320 HBBP68871 147 aa13.96□□□□□ -0.17
SCARB1-206ENST00000539320 TCAPO15273 167 aa13.95□□□□□ -0.18
SCARB1-206ENST00000539320 SMIM2Q9BVW6 85 aa13.95□□□□□ -0.18
SCARB1-206ENST00000539320 SEC11CQ9BY50 192 aa13.95□□□□□ -0.18
SCARB1-206ENST00000539320 A0A1B0GXF2 115 aa13.94□□□□□ -0.18
SCARB1-206ENST00000539320 D6R8Y8 96 aa13.94□□□□□ -0.18
SCARB1-206ENST00000539320 TNFRSF6BO95407 300 aa13.94□□□□□ -0.18
SCARB1-206ENST00000539320 MT1HL1P0DM35 61 aa13.93□□□□□ -0.18
SCARB1-206ENST00000539320 PRR3P79522 188 aaKnown RBP13.93□□□□□ -0.18
SCARB1-206ENST00000539320 IGLV4-69A0A075B6H9 119 aa13.92□□□□□ -0.18
SCARB1-206ENST00000539320 NPYP01303 97 aa13.91□□□□□ -0.18
SCARB1-206ENST00000539320 RPL39P62891 51 aaKnown RBP13.91□□□□□ -0.18
SCARB1-206ENST00000539320 APOC3P02656 99 aa13.9□□□□□ -0.18
SCARB1-206ENST00000539320 C10orf91Q5T1B1 145 aa13.9□□□□□ -0.18
SCARB1-206ENST00000539320 C5orf38Q86SI9 138 aa13.9□□□□□ -0.18
SCARB1-206ENST00000539320 SPANXA1Q9NS26 97 aa13.9□□□□□ -0.18
SCARB1-206ENST00000539320 PLA2G2DQ9UNK4 145 aa13.9□□□□□ -0.18
SCARB1-206ENST00000539320 CARHSP1Q9Y2V2 147 aaKnown RBP13.9□□□□□ -0.18
SCARB1-206ENST00000539320 LOC107984640A0A0U1RRK4 108 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms