RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 P01737 135 aa7.44□□□□□ -1.22
YBX3-207ENST00000539204 FOXA3P55318 350 aaPredicted RBP7.44□□□□□ -1.22
YBX3-207ENST00000539204 ZNF664Q8N3J9 261 aa7.44□□□□□ -1.22
YBX3-207ENST00000539204 PRSS3P2Q8NHM4 247 aa7.44□□□□□ -1.22
YBX3-207ENST00000539204 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
YBX3-207ENST00000539204 TRAPPC1Q9Y5R8 145 aa7.44□□□□□ -1.22
YBX3-207ENST00000539204 TRAV26-2A0A0B4J265 109 aa7.43□□□□□ -1.22
YBX3-207ENST00000539204 IGKV3D-20A0A0C4DH25 116 aa7.43□□□□□ -1.22
YBX3-207ENST00000539204 RBX1P62877 108 aa7.43□□□□□ -1.22
YBX3-207ENST00000539204 PRR27Q6MZM9 219 aa7.43□□□□□ -1.22
YBX3-207ENST00000539204 ATP5L2Q7Z4Y8 100 aa7.43□□□□□ -1.22
YBX3-207ENST00000539204 PSORS1C2Q9UIG4 136 aa7.43□□□□□ -1.22
YBX3-207ENST00000539204 TRAV8-4A0A0B4J246 113 aa7.42□□□□□ -1.22
YBX3-207ENST00000539204 GZMBP10144 247 aa7.42□□□□□ -1.22
YBX3-207ENST00000539204 CRIP1P50238 77 aa7.42□□□□□ -1.22
YBX3-207ENST00000539204 NDUFA6P56556 154 aa7.42□□□□□ -1.22
YBX3-207ENST00000539204 REG3AQ06141 175 aa7.42□□□□□ -1.22
YBX3-207ENST00000539204 FABP9Q0Z7S8 132 aa7.42□□□□□ -1.22
YBX3-207ENST00000539204 PRR4Q16378 134 aa7.42□□□□□ -1.22
YBX3-207ENST00000539204 NUP35Q8NFH5 326 aa7.42□□□□□ -1.22
YBX3-207ENST00000539204 GAGE6Q13070 117 aa7.41□□□□□ -1.22
YBX3-207ENST00000539204 FAM162BQ5T6X4 162 aa7.41□□□□□ -1.22
YBX3-207ENST00000539204 TMEM136Q6ZRR5 245 aa7.41□□□□□ -1.22
YBX3-207ENST00000539204 A0A1B0GXF2 115 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 XKRY2A2RUG3 117 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 FABP5P3A8MUU1 101 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 HIGD1CA8MV81 97 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 H3BVH4 76 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 S100A8P05109 93 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 ARMS2P0C7Q2 107 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 RPS20P60866 119 aaKnown RBP7.4□□□□□ -1.22
YBX3-207ENST00000539204 TMEM97Q5BJF2 176 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 OR2D3Q8NGH3 330 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
YBX3-207ENST00000539204 PHLDA3Q9Y5J5 127 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 FSIP2Q5CZC0 6907 aa7.4□□□□□ -1.22
YBX3-207ENST00000539204 A0A1B0GW15 77 aa7.39□□□□□ -1.23
YBX3-207ENST00000539204 CACNG7P62955 275 aa7.39□□□□□ -1.23
YBX3-207ENST00000539204 CFAP161Q6P656 301 aa7.39□□□□□ -1.23
YBX3-207ENST00000539204 HIST3H2BBQ8N257 126 aa7.39□□□□□ -1.23
YBX3-207ENST00000539204 LINC00474Q9P2X8 69 aa7.39□□□□□ -1.23
YBX3-207ENST00000539204 M0R381 172 aa7.38□□□□□ -1.23
YBX3-207ENST00000539204 SH2D1AO60880 128 aa7.38□□□□□ -1.23
YBX3-207ENST00000539204 RAB4BP61018 213 aa7.38□□□□□ -1.23
YBX3-207ENST00000539204 MRPL54Q6P161 138 aaKnown RBP7.38□□□□□ -1.23
YBX3-207ENST00000539204 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
YBX3-207ENST00000539204 GATD1Q8NB37 220 aa7.38□□□□□ -1.23
YBX3-207ENST00000539204 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
YBX3-207ENST00000539204 CRCT1Q9UGL9 99 aa7.38□□□□□ -1.23
YBX3-207ENST00000539204 TRBV25-1A0A075B6N4 114 aa7.37□□□□□ -1.23
YBX3-207ENST00000539204 A0A096LNI7 61 aa7.37□□□□□ -1.23
YBX3-207ENST00000539204 HBBP68871 147 aa7.37□□□□□ -1.23
YBX3-207ENST00000539204 DNLZQ5SXM8 178 aa7.37□□□□□ -1.23
YBX3-207ENST00000539204 LINC00518Q8N0U6 118 aa7.37□□□□□ -1.23
YBX3-207ENST00000539204 PRR26Q8N8Z3 221 aa7.37□□□□□ -1.23
YBX3-207ENST00000539204 A0A1B0GUT8 65 aa7.36□□□□□ -1.23
YBX3-207ENST00000539204 GRIFINA4D1Z8 144 aa7.36□□□□□ -1.23
YBX3-207ENST00000539204 IFITM10A6NMD0 228 aa7.36□□□□□ -1.23
YBX3-207ENST00000539204 APCSP02743 223 aa7.36□□□□□ -1.23
YBX3-207ENST00000539204 ESDP10768 282 aa7.36□□□□□ -1.23
YBX3-207ENST00000539204 RIGQ13278 110 aa7.36□□□□□ -1.23
YBX3-207ENST00000539204 LINC01559Q495D7 138 aa7.36□□□□□ -1.23
YBX3-207ENST00000539204 PGLYRP4Q96LB8 373 aa7.36□□□□□ -1.23
YBX3-207ENST00000539204 IGLC6P0CF74 106 aa7.35□□□□□ -1.23
YBX3-207ENST00000539204 AKR1D1P51857 326 aa7.35□□□□□ -1.23
YBX3-207ENST00000539204 C15orf56Q8N910 161 aa7.35□□□□□ -1.23
YBX3-207ENST00000539204 PACRGQ96M98 296 aaPredicted RBP7.35□□□□□ -1.23
YBX3-207ENST00000539204 F2Z2F3 143 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 SMIM6P0DI80 62 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 S100A2P29034 98 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 CTRLP40313 264 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 ZNF56Q15929 161 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 HIGD2BQ4VC39 106 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 C20orf203Q8NBC4 194 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 BORCS7Q96B45 105 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 CNFNQ9BYD5 112 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 PKIGQ9Y2B9 76 aa7.34□□□□□ -1.23
YBX3-207ENST00000539204 IGHV1-24A0A0C4DH33 117 aa7.33□□□□□ -1.24
YBX3-207ENST00000539204 A0A1B0GUV1 79 aa7.33□□□□□ -1.24
YBX3-207ENST00000539204 IQCJQ1A5X6 159 aa7.33□□□□□ -1.24
YBX3-207ENST00000539204 LYZL1Q6UWQ5 148 aa7.33□□□□□ -1.24
YBX3-207ENST00000539204 HIST1H2BLQ99880 126 aa7.33□□□□□ -1.24
YBX3-207ENST00000539204 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
YBX3-207ENST00000539204 GAGE12HA6NDE8 117 aa7.32□□□□□ -1.24
YBX3-207ENST00000539204 CAMPP49913 170 aa7.32□□□□□ -1.24
YBX3-207ENST00000539204 LCE2DQ5TA82 110 aaPredicted RBP7.32□□□□□ -1.24
YBX3-207ENST00000539204 FER1L6-AS1Q8NA97 138 aa7.32□□□□□ -1.24
YBX3-207ENST00000539204 TMEM18Q96B42 140 aa7.32□□□□□ -1.24
YBX3-207ENST00000539204 SSBP4Q9BWG4 385 aaPredicted RBP7.32□□□□□ -1.24
YBX3-207ENST00000539204 IGLV4-60A0A075B6I1 120 aa7.31□□□□□ -1.24
YBX3-207ENST00000539204 F5H697 171 aa7.31□□□□□ -1.24
YBX3-207ENST00000539204 TMSB15BA0A087X1C1 80 aa7.3□□□□□ -1.24
YBX3-207ENST00000539204 SNAI2O43623 268 aa7.3□□□□□ -1.24
YBX3-207ENST00000539204 OR5AL1P0C617 328 aa7.3□□□□□ -1.24
YBX3-207ENST00000539204 FABP4P15090 132 aa7.3□□□□□ -1.24
YBX3-207ENST00000539204 LINC00310P59036 64 aa7.3□□□□□ -1.24
YBX3-207ENST00000539204 KIAA1644Q3SXP7 199 aa7.3□□□□□ -1.24
YBX3-207ENST00000539204 BAGE3Q86Y29 109 aa7.3□□□□□ -1.24
YBX3-207ENST00000539204 OR10D4PQ8NGN7 298 aa7.3□□□□□ -1.24
YBX3-207ENST00000539204 C18orf32Q8TCD1 76 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms