RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 SS18Q15532 418 aa18■□□□□ 0.47
LINC01089-207ENST00000538335 MRPL52Q86TS9 123 aaKnown RBP18■□□□□ 0.47
LINC01089-207ENST00000538335 A0A087WYN8 130 aa17.99■□□□□ 0.47
LINC01089-207ENST00000538335 LINC00959A0A1B0GUT2 108 aa17.99■□□□□ 0.47
LINC01089-207ENST00000538335 GAS8-AS1O95177 125 aa17.99■□□□□ 0.47
LINC01089-207ENST00000538335 FCER1GP30273 86 aa17.99■□□□□ 0.47
LINC01089-207ENST00000538335 XCL1P47992 114 aa17.99■□□□□ 0.47
LINC01089-207ENST00000538335 FOXI1Q12951 378 aa17.99■□□□□ 0.47
LINC01089-207ENST00000538335 ADIRFQ15847 76 aa17.98■□□□□ 0.47
LINC01089-207ENST00000538335 IGHV1-58A0A0C4DH39 117 aa17.97■□□□□ 0.47
LINC01089-207ENST00000538335 PPP1R2P9O14990 202 aa17.97■□□□□ 0.47
LINC01089-207ENST00000538335 CCL25O15444 150 aa17.97■□□□□ 0.47
LINC01089-207ENST00000538335 CHTF8P0CG12 524 aa17.97■□□□□ 0.47
LINC01089-207ENST00000538335 RPL23P62829 140 aaKnown RBP17.97■□□□□ 0.47
LINC01089-207ENST00000538335 PEA15Q15121 130 aa17.97■□□□□ 0.47
LINC01089-207ENST00000538335 SERTAD4-AS1Q5TG53 156 aa17.97■□□□□ 0.47
LINC01089-207ENST00000538335 KIR2DL4Q99706 377 aa17.97■□□□□ 0.47
LINC01089-207ENST00000538335 NAT8Q9UHE5 227 aa17.97■□□□□ 0.47
LINC01089-207ENST00000538335 COX6A2Q02221 97 aa17.96■□□□□ 0.47
LINC01089-207ENST00000538335 SMDT1Q9H4I9 107 aa17.96■□□□□ 0.47
LINC01089-207ENST00000538335 CDC42SE2Q9NRR3 84 aa17.96■□□□□ 0.47
LINC01089-207ENST00000538335 ZNF664Q8N3J9 261 aa17.95■□□□□ 0.46
LINC01089-207ENST00000538335 C7orf33Q8WU49 177 aa17.95■□□□□ 0.46
LINC01089-207ENST00000538335 PLAC8Q9NZF1 115 aa17.95■□□□□ 0.46
LINC01089-207ENST00000538335 LRP1Q07954 4544 aaKnown RBP17.95■□□□□ 0.46
LINC01089-207ENST00000538335 A0A1B0GW15 77 aa17.94■□□□□ 0.46
LINC01089-207ENST00000538335 SUMO2P61956 95 aaKnown RBP17.94■□□□□ 0.46
LINC01089-207ENST00000538335 CD164L2Q6UWJ8 174 aa17.93■□□□□ 0.46
LINC01089-207ENST00000538335 SMKR1H3BMG3 65 aa17.92■□□□□ 0.46
LINC01089-207ENST00000538335 TMEM18Q96B42 140 aa17.92■□□□□ 0.46
LINC01089-207ENST00000538335 LINC00474Q9P2X8 69 aa17.92■□□□□ 0.46
LINC01089-207ENST00000538335 PKHD1L1Q86WI1 4243 aa17.92■□□□□ 0.46
LINC01089-207ENST00000538335 FAT3Q8TDW7 4589 aa17.91■□□□□ 0.46
LINC01089-207ENST00000538335 LINC00862A6NCI5 91 aa17.91■□□□□ 0.46
LINC01089-207ENST00000538335 MAJINQ3KP22 176 aa17.91■□□□□ 0.46
LINC01089-207ENST00000538335 FAM104BQ5XKR9 115 aa17.91■□□□□ 0.46
LINC01089-207ENST00000538335 NRACQ8N912 160 aa17.91■□□□□ 0.46
LINC01089-207ENST00000538335 CSDC2Q9Y534 153 aaKnown RBP17.91■□□□□ 0.46
LINC01089-207ENST00000538335 SMIM27A0A1W2PRY6 76 aa17.9■□□□□ 0.46
LINC01089-207ENST00000538335 TCAPO15273 167 aa17.9■□□□□ 0.46
LINC01089-207ENST00000538335 S100A8P05109 93 aa17.9■□□□□ 0.46
LINC01089-207ENST00000538335 PRSS3P2Q8NHM4 247 aa17.9■□□□□ 0.46
LINC01089-207ENST00000538335 IGKV2-24A0A0C4DH68 120 aa17.89■□□□□ 0.45
LINC01089-207ENST00000538335 A0A1B0GVG6 124 aa17.89■□□□□ 0.45
LINC01089-207ENST00000538335 C1orf196B1AJZ1 125 aa17.89■□□□□ 0.45
LINC01089-207ENST00000538335 ZNF561-AS1K7EIQ3 104 aa17.89■□□□□ 0.45
LINC01089-207ENST00000538335 HNRNPA3P51991 378 aaKnown RBP17.89■□□□□ 0.45
LINC01089-207ENST00000538335 Q6ZRU5 148 aa17.89■□□□□ 0.45
LINC01089-207ENST00000538335 CAMPP49913 170 aa17.88■□□□□ 0.45
LINC01089-207ENST00000538335 CARD19Q96LW7 228 aa17.88■□□□□ 0.45
LINC01089-207ENST00000538335 C20orf78Q9BR46 151 aa17.88■□□□□ 0.45
LINC01089-207ENST00000538335 MRPL51Q4U2R6 128 aaKnown RBP17.87■□□□□ 0.45
LINC01089-207ENST00000538335 C9JQL5 133 aa17.86■□□□□ 0.45
LINC01089-207ENST00000538335 F8W036 122 aa17.86■□□□□ 0.45
LINC01089-207ENST00000538335 MALP21145 153 aa17.86■□□□□ 0.45
LINC01089-207ENST00000538335 CKS2P33552 79 aa17.86■□□□□ 0.45
LINC01089-207ENST00000538335 STPG4Q8N801 248 aa17.85■□□□□ 0.45
LINC01089-207ENST00000538335 UBE2D4Q9Y2X8 147 aa17.85■□□□□ 0.45
LINC01089-207ENST00000538335 TRBV24-1A0A075B6N3 115 aa17.83■□□□□ 0.44
LINC01089-207ENST00000538335 COX7A2LO14548 114 aa17.83■□□□□ 0.44
LINC01089-207ENST00000538335 PHOX2AO14813 284 aa17.83■□□□□ 0.44
LINC01089-207ENST00000538335 RPL32P62910 135 aaKnown RBP17.83■□□□□ 0.44
LINC01089-207ENST00000538335 SYCNQ0VAF6 134 aa17.83■□□□□ 0.44
LINC01089-207ENST00000538335 TIMM21Q9BVV7 248 aa17.83■□□□□ 0.44
LINC01089-207ENST00000538335 HBBP68871 147 aa17.82■□□□□ 0.44
LINC01089-207ENST00000538335 A0A096LNI7 61 aa17.81■□□□□ 0.44
LINC01089-207ENST00000538335 SRSF3P84103 164 aaKnown RBP17.81■□□□□ 0.44
LINC01089-207ENST00000538335 LINC00526Q96FQ7 95 aa17.8■□□□□ 0.44
LINC01089-207ENST00000538335 TRAV13-1A0A0B4J241 112 aa17.79■□□□□ 0.44
LINC01089-207ENST00000538335 TNFRSF6BO95407 300 aa17.78■□□□□ 0.44
LINC01089-207ENST00000538335 APOMO95445 188 aa17.78■□□□□ 0.44
LINC01089-207ENST00000538335 PPBPP02775 128 aa17.78■□□□□ 0.44
LINC01089-207ENST00000538335 MRPL54Q6P161 138 aaKnown RBP17.78■□□□□ 0.44
LINC01089-207ENST00000538335 SMIM2Q9BVW6 85 aa17.77■□□□□ 0.44
LINC01089-207ENST00000538335 RNASE13Q5GAN3 156 aaKnown RBP17.76■□□□□ 0.43
LINC01089-207ENST00000538335 Q6ZUT4 128 aa17.76■□□□□ 0.43
LINC01089-207ENST00000538335 IGLV4-69A0A075B6H9 119 aa17.75■□□□□ 0.43
LINC01089-207ENST00000538335 D6R8Y8 96 aa17.75■□□□□ 0.43
LINC01089-207ENST00000538335 LOC107984640A0A0U1RRK4 108 aa17.74■□□□□ 0.43
LINC01089-207ENST00000538335 ATP5L2Q7Z4Y8 100 aa17.74■□□□□ 0.43
LINC01089-207ENST00000538335 SPANXA1Q9NS26 97 aa17.74■□□□□ 0.43
LINC01089-207ENST00000538335 PLA2G2DQ9UNK4 145 aa17.74■□□□□ 0.43
LINC01089-207ENST00000538335 A0A1B0GXF2 115 aa17.73■□□□□ 0.43
LINC01089-207ENST00000538335 CAMK2N2Q96S95 79 aa17.73■□□□□ 0.43
LINC01089-207ENST00000538335 PRR3P79522 188 aaKnown RBP17.72■□□□□ 0.43
LINC01089-207ENST00000538335 C2orf48Q96LS8 159 aa17.72■□□□□ 0.43
LINC01089-207ENST00000538335 ORMDL3Q8N138 153 aa17.71■□□□□ 0.43
LINC01089-207ENST00000538335 PTTG1IPP53801 180 aa17.7■□□□□ 0.42
LINC01089-207ENST00000538335 C5orf38Q86SI9 138 aa17.7■□□□□ 0.42
LINC01089-207ENST00000538335 NPYP01303 97 aa17.69■□□□□ 0.42
LINC01089-207ENST00000538335 RAB5AP20339 215 aa17.69■□□□□ 0.42
LINC01089-207ENST00000538335 RPL39P62891 51 aaKnown RBP17.69■□□□□ 0.42
LINC01089-207ENST00000538335 HMCN2Q8NDA2 5059 aa17.69■□□□□ 0.42
LINC01089-207ENST00000538335 MRPS36P82909 103 aaKnown RBP17.68■□□□□ 0.42
LINC01089-207ENST00000538335 GAGE2BQ13066 116 aa17.68■□□□□ 0.42
LINC01089-207ENST00000538335 OR10D4PQ8NGN7 298 aa17.68■□□□□ 0.42
LINC01089-207ENST00000538335 SPAG11BQ08648 103 aa17.67■□□□□ 0.42
LINC01089-207ENST00000538335 PNRC1Q12796 327 aaPredicted RBP17.67■□□□□ 0.42
LINC01089-207ENST00000538335 TMEM136Q6ZRR5 245 aa17.67■□□□□ 0.42
LINC01089-207ENST00000538335 MT1HL1P0DM35 61 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms