RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 A0A087WW49 117 aa7.82□□□□□ -1.16
RTN3-208ENST00000537981 COX7A2LO14548 114 aa7.82□□□□□ -1.16
RTN3-208ENST00000537981 SOSTDC1Q6X4U4 206 aa7.82□□□□□ -1.16
RTN3-208ENST00000537981 COL6A6A6NMZ7 2263 aa7.82□□□□□ -1.16
RTN3-208ENST00000537981 IGSF10Q6WRI0 2623 aa7.81□□□□□ -1.16
RTN3-208ENST00000537981 TRBV27A0A0K0K1C4 114 aa7.81□□□□□ -1.16
RTN3-208ENST00000537981 CLEC19AQ6UXS0 136 aa7.81□□□□□ -1.16
RTN3-208ENST00000537981 PRYO14603 147 aa7.81□□□□□ -1.16
RTN3-208ENST00000537981 Q9UF83 564 aa7.81□□□□□ -1.16
RTN3-208ENST00000537981 KLK9Q9UKQ9 250 aa7.81□□□□□ -1.16
RTN3-208ENST00000537981 C16orf95Q9H693 158 aa7.8□□□□□ -1.16
RTN3-208ENST00000537981 TLN1Q9Y490 2541 aaKnown RBP7.8□□□□□ -1.16
RTN3-208ENST00000537981 IGHV1-69P01742 117 aa7.8□□□□□ -1.16
RTN3-208ENST00000537981 TRAV21A0A0B4J279 112 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 IGHV1-58A0A0C4DH39 117 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 IGHG2P01859 326 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 FP248Q71RG6 208 aaPredicted RBP7.79□□□□□ -1.16
RTN3-208ENST00000537981 C20orf203Q8NBC4 194 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 PLA2G2DQ9UNK4 145 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 NBASA2RRP1 2371 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 RPL28P46779 137 aaKnown RBP7.79□□□□□ -1.16
RTN3-208ENST00000537981 ECSCRQ19T08 205 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.79□□□□□ -1.16
RTN3-208ENST00000537981 PRR26Q8N8Z3 221 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 VSIG2Q96IQ7 327 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 DOPEY2Q9Y3R5 2298 aa7.79□□□□□ -1.16
RTN3-208ENST00000537981 TRAV23DV6A0A075B6W5 121 aa7.78□□□□□ -1.16
RTN3-208ENST00000537981 C20orf197Q8N268 126 aa7.78□□□□□ -1.16
RTN3-208ENST00000537981 TRBV12-3P01733 135 aa7.78□□□□□ -1.16
RTN3-208ENST00000537981 CD28P10747 220 aa7.78□□□□□ -1.16
RTN3-208ENST00000537981 ITLN2Q8WWU7 325 aaPredicted RBP7.78□□□□□ -1.16
RTN3-208ENST00000537981 RNASE6Q93091 150 aaKnown RBP7.78□□□□□ -1.16
RTN3-208ENST00000537981 C9orf85Q96MD7 179 aa7.78□□□□□ -1.16
RTN3-208ENST00000537981 LINC00474Q9P2X8 69 aa7.78□□□□□ -1.16
RTN3-208ENST00000537981 KMT2BQ9UMN6 2715 aaPredicted RBP7.78□□□□□ -1.16
RTN3-208ENST00000537981 M0QY20 66 aa7.77□□□□□ -1.17
RTN3-208ENST00000537981 LINC00308Q8TCZ7 52 aa7.77□□□□□ -1.17
RTN3-208ENST00000537981 G3V318 75 aa7.77□□□□□ -1.17
RTN3-208ENST00000537981 PPP1R17O96001 155 aa7.77□□□□□ -1.17
RTN3-208ENST00000537981 PRIMA1Q86XR5 153 aa7.77□□□□□ -1.17
RTN3-208ENST00000537981 TMEM243Q9BU79 118 aa7.77□□□□□ -1.17
RTN3-208ENST00000537981 FAM208BQ5VWN6 2430 aa7.77□□□□□ -1.17
RTN3-208ENST00000537981 CFAP46Q8IYW2 2715 aa7.76□□□□□ -1.17
RTN3-208ENST00000537981 PROK1P58294 105 aa7.76□□□□□ -1.17
RTN3-208ENST00000537981 DEFB109BQ30KR1 87 aa7.76□□□□□ -1.17
RTN3-208ENST00000537981 A0A087WYN8 130 aa7.76□□□□□ -1.17
RTN3-208ENST00000537981 IGHV3-73A0A0B4J1V6 119 aa7.76□□□□□ -1.17
RTN3-208ENST00000537981 IGHV7-81A0A0B4J1V7 117 aa7.76□□□□□ -1.17
RTN3-208ENST00000537981 MRPS36P82909 103 aaKnown RBP7.76□□□□□ -1.17
RTN3-208ENST00000537981 LYPD5Q6UWN5 251 aa7.76□□□□□ -1.17
RTN3-208ENST00000537981 NPBQ8NG41 125 aa7.76□□□□□ -1.17
RTN3-208ENST00000537981 DYNLRB1Q9NP97 96 aa7.76□□□□□ -1.17
RTN3-208ENST00000537981 NCR3O14931 201 aa7.75□□□□□ -1.17
RTN3-208ENST00000537981 DNAL4O96015 105 aa7.75□□□□□ -1.17
RTN3-208ENST00000537981 PIK3CD-AS1Q5SR53 167 aa7.75□□□□□ -1.17
RTN3-208ENST00000537981 FDCSPQ8NFU4 85 aa7.75□□□□□ -1.17
RTN3-208ENST00000537981 UBE2D4Q9Y2X8 147 aa7.75□□□□□ -1.17
RTN3-208ENST00000537981 C2CD3Q4AC94 2353 aa7.75□□□□□ -1.17
RTN3-208ENST00000537981 BSPH1Q075Z2 132 aa7.75□□□□□ -1.17
RTN3-208ENST00000537981 CDKN2A-AS1Q9UH64 79 aa7.75□□□□□ -1.17
RTN3-208ENST00000537981 FAM215AQ9Y5M1 114 aa7.75□□□□□ -1.17
RTN3-208ENST00000537981 LY6HO94772 140 aa7.74□□□□□ -1.17
RTN3-208ENST00000537981 UNQ9165/PRO28630Q6UXU0 137 aa7.74□□□□□ -1.17
RTN3-208ENST00000537981 CD164Q04900 197 aa7.74□□□□□ -1.17
RTN3-208ENST00000537981 Q6JHZ5 121 aa7.74□□□□□ -1.17
RTN3-208ENST00000537981 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.73□□□□□ -1.171e-8■■■■□ 24
RTN3-208ENST00000537981 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
RTN3-208ENST00000537981 SLPIP03973 132 aa7.73□□□□□ -1.17
RTN3-208ENST00000537981 KAAG1Q9UBP8 84 aa7.73□□□□□ -1.17
RTN3-208ENST00000537981 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.73□□□□□ -1.17
RTN3-208ENST00000537981 TRBV6-5A0A0K0K1A5 114 aa7.73□□□□□ -1.17
RTN3-208ENST00000537981 IGKV2-29A2NJV5 120 aaPredicted RBP7.73□□□□□ -1.17
RTN3-208ENST00000537981 COX6A2Q02221 97 aa7.73□□□□□ -1.17
RTN3-208ENST00000537981 LINC00482Q8N8I6 264 aa7.73□□□□□ -1.17
RTN3-208ENST00000537981 BRK1Q8WUW1 75 aa7.73□□□□□ -1.17
RTN3-208ENST00000537981 RNF5Q99942 180 aa7.73□□□□□ -1.17
RTN3-208ENST00000537981 AKAP9Q99996 3911 aa7.73□□□□□ -1.17
RTN3-208ENST00000537981 TRAV12-2A0A075B6T6 113 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 H7BZZ5 65 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 PRB1P04280 392 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 INAFM2P0DMQ5 153 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 SS18Q15532 418 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 Q96MF0 132 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 SPTAN1Q13813 2472 aaKnown RBP7.72□□□□□ -1.17
RTN3-208ENST00000537981 ATP6V0E1O15342 81 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 XCL1P47992 114 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 DPM3Q9P2X0 92 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 XCL2Q9UBD3 114 aa7.72□□□□□ -1.17
RTN3-208ENST00000537981 IGKV3-20P01619 116 aa7.71□□□□□ -1.18
RTN3-208ENST00000537981 BBC3Q96PG8 261 aaPredicted RBP7.71□□□□□ -1.18
RTN3-208ENST00000537981 SNURFQ9Y675 71 aa7.71□□□□□ -1.18
RTN3-208ENST00000537981 SOCS3O14543 225 aa7.71□□□□□ -1.18
RTN3-208ENST00000537981 FAM222AQ5U5X8 452 aa7.71□□□□□ -1.18
RTN3-208ENST00000537981 ZNF462Q96JM2 2506 aa7.71□□□□□ -1.18
RTN3-208ENST00000537981 PRM2P04554 102 aa7.7□□□□□ -1.18
RTN3-208ENST00000537981 MED14OSP0DP75 135 aa7.7□□□□□ -1.18
RTN3-208ENST00000537981 LY6G5BQ8NDX9 201 aa7.7□□□□□ -1.18
RTN3-208ENST00000537981 ENHOQ6UWT2 76 aa7.7□□□□□ -1.18
RTN3-208ENST00000537981 NUP37Q8NFH4 326 aa7.7□□□□□ -1.18
RTN3-208ENST00000537981 FAM30AQ9NZY2 134 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms