RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 FAM231BA6NCW3 169 aa8.8□□□□□ -1
SYNE1-235ENST00000537033 CCL25O15444 150 aa8.8□□□□□ -1
SYNE1-235ENST00000537033 TSHBP01222 138 aa8.8□□□□□ -1
SYNE1-235ENST00000537033 LYPD6BQ8NI32 183 aa8.8□□□□□ -1
SYNE1-235ENST00000537033 LINC00959A0A1B0GUT2 108 aa8.79□□□□□ -1
SYNE1-235ENST00000537033 C7orf77A4D0Y5 90 aa8.79□□□□□ -1
SYNE1-235ENST00000537033 ZNF727A8MUV8 499 aa8.79□□□□□ -1
SYNE1-235ENST00000537033 ESDP10768 282 aa8.79□□□□□ -1
SYNE1-235ENST00000537033 RAB14P61106 215 aa8.79□□□□□ -1
SYNE1-235ENST00000537033 LINC01551Q86U37 167 aa8.79□□□□□ -1
SYNE1-235ENST00000537033 STPG4Q8N801 248 aa8.79□□□□□ -1
SYNE1-235ENST00000537033 CARD19Q96LW7 228 aa8.79□□□□□ -1
SYNE1-235ENST00000537033 PKHD1L1Q86WI1 4243 aa8.79□□□□□ -1
SYNE1-235ENST00000537033 FAT3Q8TDW7 4589 aa8.78□□□□□ -1
SYNE1-235ENST00000537033 ZNF561-AS1K7EIQ3 104 aa8.78□□□□□ -1
SYNE1-235ENST00000537033 FCER1GP30273 86 aa8.78□□□□□ -1
SYNE1-235ENST00000537033 SMAGPQ0VAQ4 97 aa8.78□□□□□ -1
SYNE1-235ENST00000537033 MRPL52Q86TS9 123 aaKnown RBP8.78□□□□□ -1
SYNE1-235ENST00000537033 OSTCQ9NRP0 149 aa8.78□□□□□ -1
SYNE1-235ENST00000537033 A0A096LNI7 61 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 TRBV27A0A0K0K1C4 114 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 ATP6V1G1O75348 118 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 GAS8-AS1O95177 125 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 PPP1R17O96001 155 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 MT1HL1P0DM35 61 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 RAB4AP20338 218 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 RIGQ13278 110 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 AMN1Q8IY45 258 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 ZNF664Q8N3J9 261 aa8.77□□□□□ -1.01
SYNE1-235ENST00000537033 VCYO14598 125 aa8.76□□□□□ -1.01
SYNE1-235ENST00000537033 POLR2KP53803 58 aaKnown RBP8.76□□□□□ -1.01
SYNE1-235ENST00000537033 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
SYNE1-235ENST00000537033 CLLU1Q5K131 121 aa8.76□□□□□ -1.01
SYNE1-235ENST00000537033 CDC42SE2Q9NRR3 84 aa8.76□□□□□ -1.01
SYNE1-235ENST00000537033 MALP21145 153 aa8.75□□□□□ -1.01
SYNE1-235ENST00000537033 ISOC2Q96AB3 205 aa8.75□□□□□ -1.01
SYNE1-235ENST00000537033 LINC00526Q96FQ7 95 aa8.75□□□□□ -1.01
SYNE1-235ENST00000537033 KIR2DL4Q99706 377 aa8.75□□□□□ -1.01
SYNE1-235ENST00000537033 C1orf196B1AJZ1 125 aa8.74□□□□□ -1.01
SYNE1-235ENST00000537033 SRP19P09132 144 aaKnown RBP8.74□□□□□ -1.01
SYNE1-235ENST00000537033 SUMO2P61956 95 aaKnown RBP8.74□□□□□ -1.01
SYNE1-235ENST00000537033 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
SYNE1-235ENST00000537033 SLC7A5P1Q8MH63 180 aa8.74□□□□□ -1.01
SYNE1-235ENST00000537033 NUP35Q8NFH5 326 aa8.74□□□□□ -1.01
SYNE1-235ENST00000537033 NAT8BQ9UHF3 227 aa8.74□□□□□ -1.01
SYNE1-235ENST00000537033 LINC00862A6NCI5 91 aa8.73□□□□□ -1.01
SYNE1-235ENST00000537033 SMKR1H3BMG3 65 aa8.73□□□□□ -1.01
SYNE1-235ENST00000537033 COX7A2LO14548 114 aa8.73□□□□□ -1.01
SYNE1-235ENST00000537033 PPP1R2P9O14990 202 aa8.73□□□□□ -1.01
SYNE1-235ENST00000537033 CAMPP49913 170 aa8.73□□□□□ -1.01
SYNE1-235ENST00000537033 FAM74A3Q4VXF1 159 aa8.73□□□□□ -1.01
SYNE1-235ENST00000537033 V9GYV3 84 aa8.73□□□□□ -1.01
SYNE1-235ENST00000537033 TMEM241Q24JQ0 296 aa8.72□□□□□ -1.01
SYNE1-235ENST00000537033 TMEM18Q96B42 140 aa8.72□□□□□ -1.01
SYNE1-235ENST00000537033 CSDC2Q9Y534 153 aaKnown RBP8.72□□□□□ -1.01
SYNE1-235ENST00000537033 LOC107984640A0A0U1RRK4 108 aa8.71□□□□□ -1.02
SYNE1-235ENST00000537033 ADIRFQ15847 76 aa8.71□□□□□ -1.02
SYNE1-235ENST00000537033 NRACQ8N912 160 aa8.71□□□□□ -1.02
SYNE1-235ENST00000537033 UBE2D4Q9Y2X8 147 aa8.71□□□□□ -1.02
SYNE1-235ENST00000537033 HMCN2Q8NDA2 5059 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 IGLV4-69A0A075B6H9 119 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 TRAV13-1A0A0B4J241 112 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 APOMO95445 188 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 S100A1P23297 94 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 PTTG1IPP53801 180 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 GAGE2BQ13066 116 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 RNASE13Q5GAN3 156 aaKnown RBP8.7□□□□□ -1.02
SYNE1-235ENST00000537033 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 Q6ZRP5 223 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 LINC01600Q96MT4 127 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 CAMK2N2Q96S95 79 aa8.7□□□□□ -1.02
SYNE1-235ENST00000537033 TCAPO15273 167 aa8.69□□□□□ -1.02
SYNE1-235ENST00000537033 RPL23P62829 140 aaKnown RBP8.69□□□□□ -1.02
SYNE1-235ENST00000537033 MRPL51Q4U2R6 128 aaKnown RBP8.69□□□□□ -1.02
SYNE1-235ENST00000537033 FAM104BQ5XKR9 115 aa8.69□□□□□ -1.02
SYNE1-235ENST00000537033 SPINK6Q6UWN8 80 aa8.69□□□□□ -1.02
SYNE1-235ENST00000537033 COMMD7Q86VX2 200 aa8.69□□□□□ -1.02
SYNE1-235ENST00000537033 NAT8Q9UHE5 227 aa8.69□□□□□ -1.02
SYNE1-235ENST00000537033 A0A1B0GW15 77 aa8.68□□□□□ -1.02
SYNE1-235ENST00000537033 CKS2P33552 79 aa8.68□□□□□ -1.02
SYNE1-235ENST00000537033 Q6ZUT4 128 aa8.68□□□□□ -1.02
SYNE1-235ENST00000537033 C20orf78Q9BR46 151 aa8.68□□□□□ -1.02
SYNE1-235ENST00000537033 TIMM21Q9BVV7 248 aa8.68□□□□□ -1.02
SYNE1-235ENST00000537033 SMIM27A0A1W2PRY6 76 aa8.67□□□□□ -1.02
SYNE1-235ENST00000537033 S100A8P05109 93 aa8.67□□□□□ -1.02
SYNE1-235ENST00000537033 C2orf48Q96LS8 159 aa8.67□□□□□ -1.02
SYNE1-235ENST00000537033 F8W036 122 aa8.66□□□□□ -1.02
SYNE1-235ENST00000537033 RPL32P62910 135 aaKnown RBP8.66□□□□□ -1.02
SYNE1-235ENST00000537033 RPL18AQ02543 176 aaKnown RBP8.66□□□□□ -1.02
SYNE1-235ENST00000537033 SPAG11BQ08648 103 aa8.66□□□□□ -1.02
SYNE1-235ENST00000537033 PEA15Q15121 130 aa8.66□□□□□ -1.02
SYNE1-235ENST00000537033 C5orf38Q86SI9 138 aa8.66□□□□□ -1.02
SYNE1-235ENST00000537033 TRBV24-1A0A075B6N3 115 aa8.65□□□□□ -1.02
SYNE1-235ENST00000537033 TNFRSF6BO95407 300 aa8.65□□□□□ -1.02
SYNE1-235ENST00000537033 A0A0J9YXV3 536 aa8.64□□□□□ -1.03
SYNE1-235ENST00000537033 HBBP68871 147 aa8.64□□□□□ -1.03
SYNE1-235ENST00000537033 OR10D4PQ8NGN7 298 aa8.64□□□□□ -1.03
SYNE1-235ENST00000537033 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
SYNE1-235ENST00000537033 SPANXA1Q9NS26 97 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms