RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 UQCC3Q6UW78 93 aa8.52□□□□□ -1.05
PRKDC-206ENST00000536429 MRPL52Q86TS9 123 aaKnown RBP8.52□□□□□ -1.05
PRKDC-206ENST00000536429 OR5A1Q8NGJ0 315 aa8.52□□□□□ -1.05
PRKDC-206ENST00000536429 C20orf78Q9BR46 151 aa8.52□□□□□ -1.05
PRKDC-206ENST00000536429 SLPIP03973 132 aa8.51□□□□□ -1.05
PRKDC-206ENST00000536429 COMMD7Q86VX2 200 aa8.51□□□□□ -1.05
PRKDC-206ENST00000536429 C15orf56Q8N910 161 aa8.51□□□□□ -1.05
PRKDC-206ENST00000536429 TMEM101Q96IK0 257 aa8.51□□□□□ -1.05
PRKDC-206ENST00000536429 BTF3L4Q96K17 158 aa8.51□□□□□ -1.05
PRKDC-206ENST00000536429 KIR2DL4Q99706 377 aa8.51□□□□□ -1.05
PRKDC-206ENST00000536429 CDC42SE2Q9NRR3 84 aa8.51□□□□□ -1.05
PRKDC-206ENST00000536429 LINC00959A0A1B0GUT2 108 aa8.5□□□□□ -1.05
PRKDC-206ENST00000536429 hDV102S1A0JD36 115 aa8.5□□□□□ -1.05
PRKDC-206ENST00000536429 RPL32P62910 135 aaKnown RBP8.5□□□□□ -1.05
PRKDC-206ENST00000536429 FOXI1Q12951 378 aa8.5□□□□□ -1.05
PRKDC-206ENST00000536429 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
PRKDC-206ENST00000536429 TMEM136Q6ZRR5 245 aa8.5□□□□□ -1.05
PRKDC-206ENST00000536429 SCXQ7RTU7 201 aa8.5□□□□□ -1.05
PRKDC-206ENST00000536429 SMIM2Q9BVW6 85 aa8.5□□□□□ -1.05
PRKDC-206ENST00000536429 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
PRKDC-206ENST00000536429 UBE2D4Q9Y2X8 147 aa8.5□□□□□ -1.05
PRKDC-206ENST00000536429 TCAPO15273 167 aa8.49□□□□□ -1.05
PRKDC-206ENST00000536429 XCL1P47992 114 aa8.49□□□□□ -1.05
PRKDC-206ENST00000536429 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
PRKDC-206ENST00000536429 DGAT2L7PQ6IED9 249 aa8.49□□□□□ -1.05
PRKDC-206ENST00000536429 ZNF664Q8N3J9 261 aa8.49□□□□□ -1.05
PRKDC-206ENST00000536429 CLRN3Q8NCR9 226 aa8.49□□□□□ -1.05
PRKDC-206ENST00000536429 HERC1Q15751 4861 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 CCL25O15444 150 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 PPBPP02775 128 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 HIGD2BQ4VC39 106 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 Q6ZUT4 128 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 ORMDL3Q8N138 153 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 FAM104AQ969W3 186 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 PRELID3AQ96N28 172 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 CHAC1Q9BUX1 264 aa8.48□□□□□ -1.05
PRKDC-206ENST00000536429 PKHD1L1Q86WI1 4243 aa8.47□□□□□ -1.05
PRKDC-206ENST00000536429 PANO1I0J062 215 aa8.47□□□□□ -1.05
PRKDC-206ENST00000536429 PHOX2AO14813 284 aa8.47□□□□□ -1.05
PRKDC-206ENST00000536429 CNBPP62633 177 aaKnown RBP8.47□□□□□ -1.05
PRKDC-206ENST00000536429 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
PRKDC-206ENST00000536429 SEC11CQ9BY50 192 aa8.47□□□□□ -1.05
PRKDC-206ENST00000536429 SDIM1Q6ZPB5 146 aa8.46□□□□□ -1.06
PRKDC-206ENST00000536429 OPRPNQ99935 248 aaPredicted RBP8.46□□□□□ -1.06
PRKDC-206ENST00000536429 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.06
PRKDC-206ENST00000536429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.46□□□□□ -1.06
PRKDC-206ENST00000536429 LOC389332A0A1B0GUA5 103 aa8.45□□□□□ -1.06
PRKDC-206ENST00000536429 LINC00528Q8N1L1 170 aa8.45□□□□□ -1.06
PRKDC-206ENST00000536429 IMMP2LQ96T52 175 aa8.45□□□□□ -1.06
PRKDC-206ENST00000536429 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
PRKDC-206ENST00000536429 TRAV13-1A0A0B4J241 112 aa8.44□□□□□ -1.06
PRKDC-206ENST00000536429 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
PRKDC-206ENST00000536429 INAFM2P0DMQ5 153 aa8.44□□□□□ -1.06
PRKDC-206ENST00000536429 SS18Q15532 418 aa8.44□□□□□ -1.06
PRKDC-206ENST00000536429 CFAP161Q6P656 301 aa8.44□□□□□ -1.06
PRKDC-206ENST00000536429 LINC00526Q96FQ7 95 aa8.44□□□□□ -1.06
PRKDC-206ENST00000536429 TIMM21Q9BVV7 248 aa8.44□□□□□ -1.06
PRKDC-206ENST00000536429 CTDSP1Q9GZU7 261 aa8.44□□□□□ -1.06
PRKDC-206ENST00000536429 AP5S1Q9NUS5 200 aa8.44□□□□□ -1.06
PRKDC-206ENST00000536429 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
PRKDC-206ENST00000536429 GVQW2A0A096LPI5 108 aaPredicted RBP8.43□□□□□ -1.06
PRKDC-206ENST00000536429 PRSS47A8MTI9 375 aa8.43□□□□□ -1.06
PRKDC-206ENST00000536429 C10orf91Q5T1B1 145 aa8.43□□□□□ -1.06
PRKDC-206ENST00000536429 CD164L2Q6UWJ8 174 aa8.43□□□□□ -1.06
PRKDC-206ENST00000536429 TMEM18Q96B42 140 aa8.43□□□□□ -1.06
PRKDC-206ENST00000536429 CHTF8P0CG12 524 aa8.42□□□□□ -1.06
PRKDC-206ENST00000536429 KIAA1644Q3SXP7 199 aa8.42□□□□□ -1.06
PRKDC-206ENST00000536429 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
PRKDC-206ENST00000536429 LAMTOR2Q9Y2Q5 125 aa8.42□□□□□ -1.06
PRKDC-206ENST00000536429 CARHSP1Q9Y2V2 147 aaKnown RBP8.42□□□□□ -1.06
PRKDC-206ENST00000536429 LRP1Q07954 4544 aaKnown RBP8.42□□□□□ -1.06
PRKDC-206ENST00000536429 IGHV3-64A0A075B6Q5 118 aa8.41□□□□□ -1.06
PRKDC-206ENST00000536429 RAB5AP20339 215 aa8.41□□□□□ -1.06
PRKDC-206ENST00000536429 SMAGPQ0VAQ4 97 aa8.41□□□□□ -1.06
PRKDC-206ENST00000536429 SPANXA1Q9NS26 97 aa8.41□□□□□ -1.06
PRKDC-206ENST00000536429 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.4□□□□□ -1.06
PRKDC-206ENST00000536429 IGHV1-58A0A0C4DH39 117 aa8.4□□□□□ -1.06
PRKDC-206ENST00000536429 C1orf196B1AJZ1 125 aa8.4□□□□□ -1.06
PRKDC-206ENST00000536429 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.06
PRKDC-206ENST00000536429 C5orf38Q86SI9 138 aa8.4□□□□□ -1.06
PRKDC-206ENST00000536429 Q8N8P6 123 aa8.4□□□□□ -1.06
PRKDC-206ENST00000536429 TRAV9-1A0A075B6T8 112 aa8.39□□□□□ -1.07
PRKDC-206ENST00000536429 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
PRKDC-206ENST00000536429 COX6A2Q02221 97 aa8.39□□□□□ -1.07
PRKDC-206ENST00000536429 CIRBPQ14011 172 aaKnown RBP8.39□□□□□ -1.07
PRKDC-206ENST00000536429 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
PRKDC-206ENST00000536429 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
PRKDC-206ENST00000536429 COX7A2LO14548 114 aa8.38□□□□□ -1.07
PRKDC-206ENST00000536429 IFI27P40305 119 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-206ENST00000536429 ZC2HC1BQ5TFG8 222 aa8.38□□□□□ -1.07
PRKDC-206ENST00000536429 RPS10P5Q9NQ39 176 aa8.38□□□□□ -1.07
PRKDC-206ENST00000536429 IFITM10A6NMD0 228 aa8.37□□□□□ -1.07
PRKDC-206ENST00000536429 MALP21145 153 aa8.37□□□□□ -1.07
PRKDC-206ENST00000536429 S100PP25815 95 aa8.37□□□□□ -1.07
PRKDC-206ENST00000536429 RHEBQ15382 184 aa8.37□□□□□ -1.07
PRKDC-206ENST00000536429 SPACA4Q8TDM5 124 aa8.37□□□□□ -1.07
PRKDC-206ENST00000536429 PYGO1Q9Y3Y4 419 aa8.37□□□□□ -1.07
PRKDC-206ENST00000536429 IGLV4-69A0A075B6H9 119 aa8.36□□□□□ -1.07
PRKDC-206ENST00000536429 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms