RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 BTF3L4Q96K17 158 aa9.19□□□□□ -0.94
UBE3B-206ENST00000536398 CDC42SE2Q9NRR3 84 aa9.19□□□□□ -0.94
UBE3B-206ENST00000536398 SRRM2Q9UQ35 2752 aaKnown RBP9.18□□□□□ -0.94
UBE3B-206ENST00000536398 LINC00959A0A1B0GUT2 108 aa9.18□□□□□ -0.94
UBE3B-206ENST00000536398 C7orf77A4D0Y5 90 aa9.18□□□□□ -0.94
UBE3B-206ENST00000536398 D6R8Y8 96 aa9.18□□□□□ -0.94
UBE3B-206ENST00000536398 TNFRSF6BO95407 300 aa9.18□□□□□ -0.94
UBE3B-206ENST00000536398 PPP1R17O96001 155 aa9.18□□□□□ -0.94
UBE3B-206ENST00000536398 FCER1GP30273 86 aa9.18□□□□□ -0.94
UBE3B-206ENST00000536398 FOXI1Q12951 378 aa9.18□□□□□ -0.94
UBE3B-206ENST00000536398 MRPL52Q86TS9 123 aaKnown RBP9.18□□□□□ -0.94
UBE3B-206ENST00000536398 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
UBE3B-206ENST00000536398 TRBV24-1A0A075B6N3 115 aa9.17□□□□□ -0.94
UBE3B-206ENST00000536398 LINC00862A6NCI5 91 aa9.17□□□□□ -0.94
UBE3B-206ENST00000536398 NPYP01303 97 aa9.17□□□□□ -0.94
UBE3B-206ENST00000536398 XCL1P47992 114 aa9.17□□□□□ -0.94
UBE3B-206ENST00000536398 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
UBE3B-206ENST00000536398 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
UBE3B-206ENST00000536398 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
UBE3B-206ENST00000536398 C20orf78Q9BR46 151 aa9.17□□□□□ -0.94
UBE3B-206ENST00000536398 F8W036 122 aa9.16□□□□□ -0.94
UBE3B-206ENST00000536398 PPP1R2P9O14990 202 aa9.16□□□□□ -0.94
UBE3B-206ENST00000536398 CCL25O15444 150 aa9.16□□□□□ -0.94
UBE3B-206ENST00000536398 S100A8P05109 93 aa9.16□□□□□ -0.94
UBE3B-206ENST00000536398 RNASE13Q5GAN3 156 aaKnown RBP9.16□□□□□ -0.94
UBE3B-206ENST00000536398 ZNF664Q8N3J9 261 aa9.16□□□□□ -0.94
UBE3B-206ENST00000536398 UBE2D4Q9Y2X8 147 aa9.16□□□□□ -0.94
UBE3B-206ENST00000536398 HERC1Q15751 4861 aa9.16□□□□□ -0.94
UBE3B-206ENST00000536398 PNRC1Q12796 327 aaPredicted RBP9.15□□□□□ -0.94
UBE3B-206ENST00000536398 CFAP161Q6P656 301 aa9.15□□□□□ -0.94
UBE3B-206ENST00000536398 KIR2DL4Q99706 377 aa9.15□□□□□ -0.94
UBE3B-206ENST00000536398 AP5S1Q9NUS5 200 aa9.15□□□□□ -0.94
UBE3B-206ENST00000536398 TCAPO15273 167 aa9.14□□□□□ -0.95
UBE3B-206ENST00000536398 MT-ND4LP03901 98 aa9.14□□□□□ -0.95
UBE3B-206ENST00000536398 ADCYAP1P18509 176 aa9.14□□□□□ -0.95
UBE3B-206ENST00000536398 RPL39P62891 51 aaKnown RBP9.14□□□□□ -0.95
UBE3B-206ENST00000536398 ATP5L2Q7Z4Y8 100 aa9.14□□□□□ -0.95
UBE3B-206ENST00000536398 SMIM2Q9BVW6 85 aa9.14□□□□□ -0.95
UBE3B-206ENST00000536398 FLG2Q5D862 2391 aaPredicted RBP9.14□□□□□ -0.95
UBE3B-206ENST00000536398 RPL32P62910 135 aaKnown RBP9.13□□□□□ -0.95
UBE3B-206ENST00000536398 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
UBE3B-206ENST00000536398 FAM104AQ969W3 186 aa9.13□□□□□ -0.95
UBE3B-206ENST00000536398 ANAPC16Q96DE5 110 aa9.13□□□□□ -0.95
UBE3B-206ENST00000536398 LINC00526Q96FQ7 95 aa9.13□□□□□ -0.95
UBE3B-206ENST00000536398 IGHV3-64A0A075B6Q5 118 aa9.12□□□□□ -0.95
UBE3B-206ENST00000536398 PLA2G1BP04054 148 aaKnown RBP9.12□□□□□ -0.95
UBE3B-206ENST00000536398 CHTF8P0CG12 524 aa9.12□□□□□ -0.95
UBE3B-206ENST00000536398 KRTAP10-4P60372 401 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-206ENST00000536398 SS18Q15532 418 aa9.12□□□□□ -0.95
UBE3B-206ENST00000536398 Q6ZUT4 128 aa9.12□□□□□ -0.95
UBE3B-206ENST00000536398 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
UBE3B-206ENST00000536398 GVQW2A0A096LPI5 108 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-206ENST00000536398 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-206ENST00000536398 TMEM218A2RU14 115 aa9.11□□□□□ -0.95
UBE3B-206ENST00000536398 PPBPP02775 128 aa9.11□□□□□ -0.95
UBE3B-206ENST00000536398 CD164L2Q6UWJ8 174 aa9.11□□□□□ -0.95
UBE3B-206ENST00000536398 ORMDL3Q8N138 153 aa9.11□□□□□ -0.95
UBE3B-206ENST00000536398 OPRPNQ99935 248 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-206ENST00000536398 CSDC2Q9Y534 153 aaKnown RBP9.11□□□□□ -0.95
UBE3B-206ENST00000536398 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
UBE3B-206ENST00000536398 PHOX2AO14813 284 aa9.1□□□□□ -0.95
UBE3B-206ENST00000536398 IGHV1-58A0A0C4DH39 117 aa9.09□□□□□ -0.95
UBE3B-206ENST00000536398 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
UBE3B-206ENST00000536398 COX6A2Q02221 97 aa9.09□□□□□ -0.95
UBE3B-206ENST00000536398 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
UBE3B-206ENST00000536398 UQCC3Q6UW78 93 aa9.09□□□□□ -0.95
UBE3B-206ENST00000536398 TMEM18Q96B42 140 aa9.09□□□□□ -0.95
UBE3B-206ENST00000536398 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
UBE3B-206ENST00000536398 C1orf196B1AJZ1 125 aa9.08□□□□□ -0.96
UBE3B-206ENST00000536398 COMMD7Q86VX2 200 aa9.08□□□□□ -0.96
UBE3B-206ENST00000536398 PRSS3P2Q8NHM4 247 aa9.08□□□□□ -0.96
UBE3B-206ENST00000536398 DPH3Q96FX2 82 aa9.08□□□□□ -0.96
UBE3B-206ENST00000536398 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
UBE3B-206ENST00000536398 SMAGPQ0VAQ4 97 aa9.07□□□□□ -0.96
UBE3B-206ENST00000536398 SPACA4Q8TDM5 124 aa9.07□□□□□ -0.96
UBE3B-206ENST00000536398 LRP1Q07954 4544 aaKnown RBP9.06□□□□□ -0.96
UBE3B-206ENST00000536398 A0A087WYN8 130 aa9.06□□□□□ -0.96
UBE3B-206ENST00000536398 PRSS47A8MTI9 375 aa9.06□□□□□ -0.96
UBE3B-206ENST00000536398 C5orf38Q86SI9 138 aa9.06□□□□□ -0.96
UBE3B-206ENST00000536398 IGKV2-24A0A0C4DH68 120 aa9.05□□□□□ -0.96
UBE3B-206ENST00000536398 COX7A2LO14548 114 aa9.05□□□□□ -0.96
UBE3B-206ENST00000536398 RAB5AP20339 215 aa9.05□□□□□ -0.96
UBE3B-206ENST00000536398 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
UBE3B-206ENST00000536398 IMMP2LQ96T52 175 aa9.05□□□□□ -0.96
UBE3B-206ENST00000536398 SPANXA1Q9NS26 97 aa9.05□□□□□ -0.96
UBE3B-206ENST00000536398 FAT3Q8TDW7 4589 aa9.05□□□□□ -0.96
UBE3B-206ENST00000536398 IGLV4-69A0A075B6H9 119 aa9.04□□□□□ -0.96
UBE3B-206ENST00000536398 MALP21145 153 aa9.04□□□□□ -0.96
UBE3B-206ENST00000536398 KIAA1644Q3SXP7 199 aa9.04□□□□□ -0.96
UBE3B-206ENST00000536398 Q8N8P6 123 aa9.04□□□□□ -0.96
UBE3B-206ENST00000536398 SEC11CQ9BY50 192 aa9.04□□□□□ -0.96
UBE3B-206ENST00000536398 MAP1LC3AQ9H492 121 aa9.04□□□□□ -0.96
UBE3B-206ENST00000536398 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
UBE3B-206ENST00000536398 ZNF561-AS1K7EIQ3 104 aa9.03□□□□□ -0.96
UBE3B-206ENST00000536398 HNRNPA3P51991 378 aaKnown RBP9.03□□□□□ -0.96
UBE3B-206ENST00000536398 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
UBE3B-206ENST00000536398 MAJINQ3KP22 176 aa9.03□□□□□ -0.96
UBE3B-206ENST00000536398 CARD19Q96LW7 228 aa9.03□□□□□ -0.96
UBE3B-206ENST00000536398 CTDSP1Q9GZU7 261 aa9.03□□□□□ -0.96
UBE3B-206ENST00000536398 A0A096LNI7 61 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms