RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 SLPIP03973 132 aa8.35□□□□□ -1.07
RTN3-207ENST00000536011 SMAGPQ0VAQ4 97 aa8.35□□□□□ -1.07
RTN3-207ENST00000536011 HIGD2BQ4VC39 106 aa8.35□□□□□ -1.07
RTN3-207ENST00000536011 Q6ZRU5 148 aa8.35□□□□□ -1.07
RTN3-207ENST00000536011 LINC01551Q86U37 167 aa8.35□□□□□ -1.07
RTN3-207ENST00000536011 TMEM191AQ9H0A3 160 aa8.35□□□□□ -1.07
RTN3-207ENST00000536011 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
RTN3-207ENST00000536011 ZNF727A8MUV8 499 aa8.34□□□□□ -1.07
RTN3-207ENST00000536011 PPP1R17O96001 155 aa8.34□□□□□ -1.07
RTN3-207ENST00000536011 CHTF8P0CG12 524 aa8.34□□□□□ -1.07
RTN3-207ENST00000536011 XCL1P47992 114 aa8.34□□□□□ -1.07
RTN3-207ENST00000536011 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
RTN3-207ENST00000536011 COX6A2Q02221 97 aa8.34□□□□□ -1.07
RTN3-207ENST00000536011 OSTCQ9NRP0 149 aa8.34□□□□□ -1.07
RTN3-207ENST00000536011 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
RTN3-207ENST00000536011 ESDP10768 282 aa8.33□□□□□ -1.08
RTN3-207ENST00000536011 FOXI1Q12951 378 aa8.33□□□□□ -1.08
RTN3-207ENST00000536011 SS18Q15532 418 aa8.33□□□□□ -1.08
RTN3-207ENST00000536011 MRPL52Q86TS9 123 aaKnown RBP8.33□□□□□ -1.08
RTN3-207ENST00000536011 TMEM242Q9NWH2 141 aa8.33□□□□□ -1.08
RTN3-207ENST00000536011 PLA2G2DQ9UNK4 145 aa8.33□□□□□ -1.08
RTN3-207ENST00000536011 hCG_2014768A0A024R1R8 64 aa8.32□□□□□ -1.08
RTN3-207ENST00000536011 IGHV1-58A0A0C4DH39 117 aa8.32□□□□□ -1.08
RTN3-207ENST00000536011 TRBV27A0A0K0K1C4 114 aa8.32□□□□□ -1.08
RTN3-207ENST00000536011 LINC00959A0A1B0GUT2 108 aa8.32□□□□□ -1.08
RTN3-207ENST00000536011 C7orf77A4D0Y5 90 aa8.32□□□□□ -1.08
RTN3-207ENST00000536011 CCL25O15444 150 aa8.32□□□□□ -1.08
RTN3-207ENST00000536011 TSHBP01222 138 aa8.32□□□□□ -1.08
RTN3-207ENST00000536011 RIGQ13278 110 aa8.32□□□□□ -1.08
RTN3-207ENST00000536011 MAJINQ3KP22 176 aa8.32□□□□□ -1.08
RTN3-207ENST00000536011 IGKV2-24A0A0C4DH68 120 aa8.31□□□□□ -1.08
RTN3-207ENST00000536011 FCER1GP30273 86 aa8.31□□□□□ -1.08
RTN3-207ENST00000536011 FAM74A3Q4VXF1 159 aa8.31□□□□□ -1.08
RTN3-207ENST00000536011 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
RTN3-207ENST00000536011 VCYO14598 125 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 PHOX2AO14813 284 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 RAB4AP20338 218 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 POLR2KP53803 58 aaKnown RBP8.3□□□□□ -1.08
RTN3-207ENST00000536011 CD164L2Q6UWJ8 174 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 AMN1Q8IY45 258 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 ZNF664Q8N3J9 261 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 PRSS3P2Q8NHM4 247 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 CARD19Q96LW7 228 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 KRTAP9-2Q9BYQ4 174 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
RTN3-207ENST00000536011 ZNF561-AS1K7EIQ3 104 aa8.29□□□□□ -1.08
RTN3-207ENST00000536011 PPP1R2P9O14990 202 aa8.29□□□□□ -1.08
RTN3-207ENST00000536011 STPG4Q8N801 248 aa8.29□□□□□ -1.08
RTN3-207ENST00000536011 ISOC2Q96AB3 205 aa8.29□□□□□ -1.08
RTN3-207ENST00000536011 NAT8BQ9UHF3 227 aa8.29□□□□□ -1.08
RTN3-207ENST00000536011 C1orf196B1AJZ1 125 aa8.28□□□□□ -1.08
RTN3-207ENST00000536011 GAS8-AS1O95177 125 aa8.28□□□□□ -1.08
RTN3-207ENST00000536011 SRP19P09132 144 aaKnown RBP8.28□□□□□ -1.08
RTN3-207ENST00000536011 SUMO2P61956 95 aaKnown RBP8.28□□□□□ -1.08
RTN3-207ENST00000536011 TMEM241Q24JQ0 296 aa8.28□□□□□ -1.08
RTN3-207ENST00000536011 NUP35Q8NFH5 326 aa8.28□□□□□ -1.08
RTN3-207ENST00000536011 TMEM18Q96B42 140 aa8.28□□□□□ -1.08
RTN3-207ENST00000536011 V9GYV3 84 aa8.28□□□□□ -1.08
RTN3-207ENST00000536011 A0A096LNI7 61 aa8.27□□□□□ -1.09
RTN3-207ENST00000536011 A0A1B0GW15 77 aa8.27□□□□□ -1.09
RTN3-207ENST00000536011 TCAPO15273 167 aa8.27□□□□□ -1.09
RTN3-207ENST00000536011 MALP21145 153 aa8.27□□□□□ -1.09
RTN3-207ENST00000536011 CSDC2Q9Y534 153 aaKnown RBP8.27□□□□□ -1.09
RTN3-207ENST00000536011 COX7A2LO14548 114 aa8.26□□□□□ -1.09
RTN3-207ENST00000536011 CAMPP49913 170 aa8.26□□□□□ -1.09
RTN3-207ENST00000536011 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
RTN3-207ENST00000536011 SYCNQ0VAF6 134 aa8.26□□□□□ -1.09
RTN3-207ENST00000536011 ADIRFQ15847 76 aa8.26□□□□□ -1.09
RTN3-207ENST00000536011 KRTAP9-6A0A140TA67 174 aa8.25□□□□□ -1.09
RTN3-207ENST00000536011 SMKR1H3BMG3 65 aa8.25□□□□□ -1.09
RTN3-207ENST00000536011 MT1HL1P0DM35 61 aa8.25□□□□□ -1.09
RTN3-207ENST00000536011 NRACQ8N912 160 aa8.25□□□□□ -1.09
RTN3-207ENST00000536011 NAT8Q9UHE5 227 aa8.25□□□□□ -1.09
RTN3-207ENST00000536011 UBR4Q5T4S7 5183 aa8.25□□□□□ -1.09
RTN3-207ENST00000536011 LINC00862A6NCI5 91 aa8.24□□□□□ -1.09
RTN3-207ENST00000536011 S100A8P05109 93 aa8.24□□□□□ -1.09
RTN3-207ENST00000536011 RPL23P62829 140 aaKnown RBP8.24□□□□□ -1.09
RTN3-207ENST00000536011 FAM104BQ5XKR9 115 aa8.24□□□□□ -1.09
RTN3-207ENST00000536011 C20orf78Q9BR46 151 aa8.24□□□□□ -1.09
RTN3-207ENST00000536011 TIMM21Q9BVV7 248 aa8.24□□□□□ -1.09
RTN3-207ENST00000536011 UBE2D4Q9Y2X8 147 aa8.24□□□□□ -1.09
RTN3-207ENST00000536011 LOC107984640A0A0U1RRK4 108 aa8.23□□□□□ -1.09
RTN3-207ENST00000536011 SMIM27A0A1W2PRY6 76 aa8.23□□□□□ -1.09
RTN3-207ENST00000536011 F8W036 122 aa8.23□□□□□ -1.09
RTN3-207ENST00000536011 APOMO95445 188 aa8.23□□□□□ -1.09
RTN3-207ENST00000536011 CKS2P33552 79 aa8.23□□□□□ -1.09
RTN3-207ENST00000536011 PEA15Q15121 130 aa8.23□□□□□ -1.09
RTN3-207ENST00000536011 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
RTN3-207ENST00000536011 SMDT1Q9H4I9 107 aa8.23□□□□□ -1.09
RTN3-207ENST00000536011 IGLV4-69A0A075B6H9 119 aa8.22□□□□□ -1.09
RTN3-207ENST00000536011 TRAV13-1A0A0B4J241 112 aa8.22□□□□□ -1.09
RTN3-207ENST00000536011 RPL32P62910 135 aaKnown RBP8.22□□□□□ -1.09
RTN3-207ENST00000536011 MRPL51Q4U2R6 128 aaKnown RBP8.22□□□□□ -1.09
RTN3-207ENST00000536011 CAMK2N2Q96S95 79 aa8.22□□□□□ -1.09
RTN3-207ENST00000536011 TRBV24-1A0A075B6N3 115 aa8.21□□□□□ -1.1
RTN3-207ENST00000536011 PTTG1IPP53801 180 aa8.21□□□□□ -1.1
RTN3-207ENST00000536011 REG3GQ6UW15 175 aa8.21□□□□□ -1.1
RTN3-207ENST00000536011 Q6ZRP5 223 aa8.21□□□□□ -1.1
RTN3-207ENST00000536011 C2orf48Q96LS8 159 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms