RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
CLSTN3-206ENST00000535668 LINC00474Q9P2X8 69 aa7.04□□□□□ -1.28
CLSTN3-206ENST00000535668 PKIGQ9Y2B9 76 aa7.04□□□□□ -1.28
CLSTN3-206ENST00000535668 TRBV20OR9-2A0A075B6H5 130 aa7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 MUC21A0A0G2JKD1 596 aa7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 MUC21A0A140T8X8 626 aa7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 GNG4P50150 75 aa7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 COTL1Q14019 142 aa7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 CENPWQ5EE01 88 aa7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 COA6Q5JTJ3 125 aaKnown RBP7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 CLPSL2Q6UWE3 100 aa7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 FAM231DQ6ZW35 169 aa7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
CLSTN3-206ENST00000535668 A0A0J9YXV3 536 aa7.02□□□□□ -1.29
CLSTN3-206ENST00000535668 MT-ND6P03923 174 aa7.02□□□□□ -1.29
CLSTN3-206ENST00000535668 NTF3P20783 257 aa7.02□□□□□ -1.29
CLSTN3-206ENST00000535668 PRR3P79522 188 aaKnown RBP7.02□□□□□ -1.29
CLSTN3-206ENST00000535668 SRSF9Q13242 221 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLSTN3-206ENST00000535668 SPINK6Q6UWN8 80 aa7.02□□□□□ -1.29
CLSTN3-206ENST00000535668 LINC00518Q8N0U6 118 aa7.02□□□□□ -1.29
CLSTN3-206ENST00000535668 FAM231BA6NCW3 169 aa7.01□□□□□ -1.29
CLSTN3-206ENST00000535668 PHOX2AO14813 284 aa7.01□□□□□ -1.29
CLSTN3-206ENST00000535668 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
CLSTN3-206ENST00000535668 ZNF25P17030 456 aaPredicted RBP7.01□□□□□ -1.29
CLSTN3-206ENST00000535668 COX6A2Q02221 97 aa7.01□□□□□ -1.29
CLSTN3-206ENST00000535668 LYZL1Q6UWQ5 148 aa7.01□□□□□ -1.29
CLSTN3-206ENST00000535668 OCC1Q8TAD7 63 aa7.01□□□□□ -1.29
CLSTN3-206ENST00000535668 TRBV6-5A0A0K0K1A5 114 aa7□□□□□ -1.29
CLSTN3-206ENST00000535668 S100A2P29034 98 aa7□□□□□ -1.29
CLSTN3-206ENST00000535668 AMTP48728 403 aa7□□□□□ -1.29
CLSTN3-206ENST00000535668 FOXA3P55318 350 aaPredicted RBP7□□□□□ -1.29
CLSTN3-206ENST00000535668 SNRPEP62304 92 aaKnown RBP7□□□□□ -1.29
CLSTN3-206ENST00000535668 CT83Q5H943 113 aa7□□□□□ -1.29
CLSTN3-206ENST00000535668 GATD1Q8NB37 220 aa7□□□□□ -1.29
CLSTN3-206ENST00000535668 PRSS3P2Q8NHM4 247 aa7□□□□□ -1.29
CLSTN3-206ENST00000535668 CHCHD10Q8WYQ3 142 aaPredicted RBP7□□□□□ -1.29
CLSTN3-206ENST00000535668 TGIF2-C20orf24A0A0A6YYL0 155 aa6.99□□□□□ -1.29
CLSTN3-206ENST00000535668 GAGE12HA6NDE8 117 aa6.99□□□□□ -1.29
CLSTN3-206ENST00000535668 UBE2L6O14933 153 aa6.99□□□□□ -1.29
CLSTN3-206ENST00000535668 MGPP08493 103 aa6.99□□□□□ -1.29
CLSTN3-206ENST00000535668 FABP9Q0Z7S8 132 aa6.99□□□□□ -1.29
CLSTN3-206ENST00000535668 FOXI1Q12951 378 aa6.99□□□□□ -1.29
CLSTN3-206ENST00000535668 PACRGQ96M98 296 aaPredicted RBP6.99□□□□□ -1.29
CLSTN3-206ENST00000535668 GNB1LQ9BYB4 327 aa6.99□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 TRGC2P03986 189 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 ESDP10768 282 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 AKR1D1P51857 326 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 ATP5L2Q7Z4Y8 100 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 MRPL52Q86TS9 123 aaKnown RBP6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 NUDT10Q8NFP7 164 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 OR5A1Q8NGJ0 315 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 DPH3Q96FX2 82 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 NUDT11Q96G61 164 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
CLSTN3-206ENST00000535668 CCL25O15444 150 aa6.97□□□□□ -1.29
CLSTN3-206ENST00000535668 A0A096LNI7 61 aa6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 SMIM27A0A1W2PRY6 76 aa6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 FGF6P10767 208 aa6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 SSTP61278 116 aa6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 MAJINQ3KP22 176 aa6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 REG3GQ6UW15 175 aa6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 STPG4Q8N801 248 aa6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 TPPP3Q9BW30 176 aa6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 CSDC2Q9Y534 153 aaKnown RBP6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 TRAPPC1Q9Y5R8 145 aa6.96□□□□□ -1.3
CLSTN3-206ENST00000535668 IGHV1-58A0A0C4DH39 117 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 A0A1B0GW15 77 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 SDHAF1A6NFY7 115 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 A8MWL6 223 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 NDUFA6P56556 154 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 TWIST1Q15672 202 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 CD164L2Q6UWJ8 174 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 Q6ZRP5 223 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 GTSF1Q8WW33 167 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 C12orf57Q99622 126 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 RPP21Q9H633 154 aaKnown RBP6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 NAT8BQ9UHF3 227 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 V9GYV3 84 aa6.95□□□□□ -1.3
CLSTN3-206ENST00000535668 TRBV27A0A0K0K1C4 114 aa6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 LINC00959A0A1B0GUT2 108 aa6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 I3L3M4 83 aa6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 GATCO43716 136 aaKnown RBP6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 APCSP02743 223 aa6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 POLR2KP53803 58 aaKnown RBP6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 AMMECR1LQ6DCA0 310 aa6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 TSKUQ8WUA8 353 aa6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 TMEM18Q96B42 140 aa6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 CDC42SE2Q9NRR3 84 aa6.94□□□□□ -1.3
CLSTN3-206ENST00000535668 K7EN84 100 aa6.93□□□□□ -1.3
CLSTN3-206ENST00000535668 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms