RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TMEM191AQ9H0A3 160 aa10.32□□□□□ -0.76
CLSTN3-204ENST00000535313 CHTF8P0CG12 524 aa10.31□□□□□ -0.76
CLSTN3-204ENST00000535313 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
CLSTN3-204ENST00000535313 OR5A1Q8NGJ0 315 aa10.31□□□□□ -0.76
CLSTN3-204ENST00000535313 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
CLSTN3-204ENST00000535313 MRAP2Q96G30 205 aa10.31□□□□□ -0.76
CLSTN3-204ENST00000535313 TMEM242Q9NWH2 141 aa10.31□□□□□ -0.76
CLSTN3-204ENST00000535313 A0A087WYN8 130 aa10.3□□□□□ -0.76
CLSTN3-204ENST00000535313 GAS8-AS1O95177 125 aa10.3□□□□□ -0.76
CLSTN3-204ENST00000535313 TSHBP01222 138 aa10.3□□□□□ -0.76
CLSTN3-204ENST00000535313 HNRNPA3P51991 378 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-204ENST00000535313 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-204ENST00000535313 ESDP10768 282 aa10.29□□□□□ -0.76
CLSTN3-204ENST00000535313 RAB4AP20338 218 aa10.29□□□□□ -0.76
CLSTN3-204ENST00000535313 XCL1P47992 114 aa10.29□□□□□ -0.76
CLSTN3-204ENST00000535313 COX6A2Q02221 97 aa10.29□□□□□ -0.76
CLSTN3-204ENST00000535313 FOXI1Q12951 378 aa10.29□□□□□ -0.76
CLSTN3-204ENST00000535313 RIGQ13278 110 aa10.29□□□□□ -0.76
CLSTN3-204ENST00000535313 C10orf91Q5T1B1 145 aa10.29□□□□□ -0.76
CLSTN3-204ENST00000535313 POLR2KP53803 58 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-204ENST00000535313 AMN1Q8IY45 258 aa10.28□□□□□ -0.76
CLSTN3-204ENST00000535313 TRBV27A0A0K0K1C4 114 aa10.27□□□□□ -0.77
CLSTN3-204ENST00000535313 LINC00959A0A1B0GUT2 108 aa10.27□□□□□ -0.77
CLSTN3-204ENST00000535313 C7orf77A4D0Y5 90 aa10.27□□□□□ -0.77
CLSTN3-204ENST00000535313 CCL25O15444 150 aa10.27□□□□□ -0.77
CLSTN3-204ENST00000535313 PPP1R17O96001 155 aa10.27□□□□□ -0.77
CLSTN3-204ENST00000535313 SS18Q15532 418 aa10.27□□□□□ -0.77
CLSTN3-204ENST00000535313 PLAC8Q9NZF1 115 aa10.27□□□□□ -0.77
CLSTN3-204ENST00000535313 IGKV2-24A0A0C4DH68 120 aa10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 SMIM27A0A1W2PRY6 76 aa10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 F8W036 122 aa10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 VCYO14598 125 aa10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 MAJINQ3KP22 176 aa10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 MRPL52Q86TS9 123 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 NUP35Q8NFH5 326 aa10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 PRSS3P2Q8NHM4 247 aa10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 C7orf33Q8WU49 177 aa10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 SEC11CQ9BY50 192 aa10.26□□□□□ -0.77
CLSTN3-204ENST00000535313 IGHV1-58A0A0C4DH39 117 aa10.25□□□□□ -0.77
CLSTN3-204ENST00000535313 FCER1GP30273 86 aa10.25□□□□□ -0.77
CLSTN3-204ENST00000535313 PNRC1Q12796 327 aaPredicted RBP10.25□□□□□ -0.77
CLSTN3-204ENST00000535313 Q6ZRU5 148 aa10.25□□□□□ -0.77
CLSTN3-204ENST00000535313 CDC42SE2Q9NRR3 84 aa10.25□□□□□ -0.77
CLSTN3-204ENST00000535313 NAT8BQ9UHF3 227 aa10.25□□□□□ -0.77
CLSTN3-204ENST00000535313 CARHSP1Q9Y2V2 147 aaKnown RBP10.25□□□□□ -0.77
CLSTN3-204ENST00000535313 SMKR1H3BMG3 65 aa10.24□□□□□ -0.77
CLSTN3-204ENST00000535313 SMAGPQ0VAQ4 97 aa10.24□□□□□ -0.77
CLSTN3-204ENST00000535313 SLC7A5P1Q8MH63 180 aa10.24□□□□□ -0.77
CLSTN3-204ENST00000535313 ZNF664Q8N3J9 261 aa10.24□□□□□ -0.77
CLSTN3-204ENST00000535313 PKIGQ9Y2B9 76 aa10.24□□□□□ -0.77
CLSTN3-204ENST00000535313 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
CLSTN3-204ENST00000535313 SUMO2P61956 95 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-204ENST00000535313 CD164L2Q6UWJ8 174 aa10.23□□□□□ -0.77
CLSTN3-204ENST00000535313 KIR2DL4Q99706 377 aa10.23□□□□□ -0.77
CLSTN3-204ENST00000535313 PHOX2AO14813 284 aa10.22□□□□□ -0.77
CLSTN3-204ENST00000535313 PPP1R2P9O14990 202 aa10.22□□□□□ -0.77
CLSTN3-204ENST00000535313 STPG4Q8N801 248 aa10.22□□□□□ -0.77
CLSTN3-204ENST00000535313 LINC00474Q9P2X8 69 aa10.22□□□□□ -0.77
CLSTN3-204ENST00000535313 ZNF561-AS1K7EIQ3 104 aa10.21□□□□□ -0.77
CLSTN3-204ENST00000535313 NRACQ8N912 160 aa10.21□□□□□ -0.77
CLSTN3-204ENST00000535313 LINC00526Q96FQ7 95 aa10.21□□□□□ -0.77
CLSTN3-204ENST00000535313 CARD19Q96LW7 228 aa10.21□□□□□ -0.77
CLSTN3-204ENST00000535313 A0A096LNI7 61 aa10.2□□□□□ -0.78
CLSTN3-204ENST00000535313 C1orf196B1AJZ1 125 aa10.2□□□□□ -0.78
CLSTN3-204ENST00000535313 FAM104BQ5XKR9 115 aa10.2□□□□□ -0.78
CLSTN3-204ENST00000535313 PLA2G2DQ9UNK4 145 aa10.2□□□□□ -0.78
CLSTN3-204ENST00000535313 CSDC2Q9Y534 153 aaKnown RBP10.2□□□□□ -0.78
CLSTN3-204ENST00000535313 A0A1B0GW15 77 aa10.19□□□□□ -0.78
CLSTN3-204ENST00000535313 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
CLSTN3-204ENST00000535313 MALP21145 153 aa10.19□□□□□ -0.78
CLSTN3-204ENST00000535313 CAMPP49913 170 aa10.19□□□□□ -0.78
CLSTN3-204ENST00000535313 SYCNQ0VAF6 134 aa10.19□□□□□ -0.78
CLSTN3-204ENST00000535313 MRPL51Q4U2R6 128 aaKnown RBP10.19□□□□□ -0.78
CLSTN3-204ENST00000535313 TMEM18Q96B42 140 aa10.19□□□□□ -0.78
CLSTN3-204ENST00000535313 UBE2D4Q9Y2X8 147 aa10.19□□□□□ -0.78
CLSTN3-204ENST00000535313 COX7A2LO14548 114 aa10.18□□□□□ -0.78
CLSTN3-204ENST00000535313 ANAPC16Q96DE5 110 aa10.18□□□□□ -0.78
CLSTN3-204ENST00000535313 TRAV13-1A0A0B4J241 112 aa10.17□□□□□ -0.78
CLSTN3-204ENST00000535313 MT-ND4LP03901 98 aa10.17□□□□□ -0.78
CLSTN3-204ENST00000535313 CKS2P33552 79 aa10.17□□□□□ -0.78
CLSTN3-204ENST00000535313 C20orf78Q9BR46 151 aa10.17□□□□□ -0.78
CLSTN3-204ENST00000535313 TCAPO15273 167 aa10.16□□□□□ -0.78
CLSTN3-204ENST00000535313 S100A8P05109 93 aa10.16□□□□□ -0.78
CLSTN3-204ENST00000535313 RNASE13Q5GAN3 156 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-204ENST00000535313 MRPL54Q6P161 138 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-204ENST00000535313 IGLV4-69A0A075B6H9 119 aa10.15□□□□□ -0.78
CLSTN3-204ENST00000535313 TRBV24-1A0A075B6N3 115 aa10.15□□□□□ -0.78
CLSTN3-204ENST00000535313 MT1HL1P0DM35 61 aa10.15□□□□□ -0.78
CLSTN3-204ENST00000535313 RPL32P62910 135 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-204ENST00000535313 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-204ENST00000535313 TIMM21Q9BVV7 248 aa10.15□□□□□ -0.78
CLSTN3-204ENST00000535313 APOC3P02656 99 aa10.14□□□□□ -0.79
CLSTN3-204ENST00000535313 HBBP68871 147 aa10.14□□□□□ -0.79
CLSTN3-204ENST00000535313 Q6ZUT4 128 aa10.14□□□□□ -0.79
CLSTN3-204ENST00000535313 CTDSP1Q9GZU7 261 aa10.14□□□□□ -0.79
CLSTN3-204ENST00000535313 LOC107984640A0A0U1RRK4 108 aa10.13□□□□□ -0.79
CLSTN3-204ENST00000535313 TNFRSF6BO95407 300 aa10.13□□□□□ -0.79
CLSTN3-204ENST00000535313 APOMO95445 188 aa10.13□□□□□ -0.79
CLSTN3-204ENST00000535313 CAMK2N2Q96S95 79 aa10.13□□□□□ -0.79
CLSTN3-204ENST00000535313 D6R8Y8 96 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms