RNA–Protein interactions for RNA: ENST00000533989.5

MS4A6A-220, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-220ENST00000533989 ZNF25P17030 456 aaPredicted RBP4.96□□□□□ -1.62
MS4A6A-220ENST00000533989 DPH3Q96FX2 82 aa4.96□□□□□ -1.62
MS4A6A-220ENST00000533989 LINC01600Q96MT4 127 aa4.96□□□□□ -1.62
MS4A6A-220ENST00000533989 MED9Q9NWA0 146 aa4.96□□□□□ -1.62
MS4A6A-220ENST00000533989 TRBV6-5A0A0K0K1A5 114 aa4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 PRR3P79522 188 aaKnown RBP4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 COX6A2Q02221 97 aa4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 FOXI1Q12951 378 aa4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 TWIST1Q15672 202 aa4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 CHCHD10Q8WYQ3 142 aaPredicted RBP4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 RPP21Q9H633 154 aaKnown RBP4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 LINC00474Q9P2X8 69 aa4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 PKIGQ9Y2B9 76 aa4.95□□□□□ -1.62
MS4A6A-220ENST00000533989 TRAV26-2A0A0B4J265 109 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 K7EN84 100 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 APCSP02743 223 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 FGF6P10767 208 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 AMMECR1LQ6DCA0 310 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 Q6ZNX1 250 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 SMIM15Q7Z3B0 74 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 PRSS3P2Q8NHM4 247 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 GTSF1Q8WW33 167 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
MS4A6A-220ENST00000533989 FAM231BA6NCW3 169 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 SDHAF1A6NFY7 115 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 I3L3M4 83 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 FOXA3P55318 350 aaPredicted RBP4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 MAJINQ3KP22 176 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 HIGD2BQ4VC39 106 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 FAM231DQ6ZW35 169 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 MRPL52Q86TS9 123 aaKnown RBP4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 SLC51BQ86UW2 128 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 STPG4Q8N801 248 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 OR5A1Q8NGJ0 315 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 OCC1Q8TAD7 63 aa4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 RPL39LQ96EH5 51 aaKnown RBP4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 RNASE7Q9H1E1 156 aaKnown RBP4.93□□□□□ -1.62
MS4A6A-220ENST00000533989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 A0A096LNI7 61 aa4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 IGHV1-58A0A0C4DH39 117 aa4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 A0A0J9YXV3 536 aa4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 LINC00959A0A1B0GUT2 108 aa4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 IGKV2-29A2NJV5 120 aaPredicted RBP4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 TMEM250H0YL14 139 aa4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 ESDP10768 282 aa4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 RNASEKQ6P5S7 137 aaKnown RBP4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 SPINK6Q6UWN8 80 aa4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 TCTE3Q8IZS6 198 aa4.92□□□□□ -1.62
MS4A6A-220ENST00000533989 IGKV2-24A0A0C4DH68 120 aa4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 IGKV3OR2-268A0A0C4DH90 116 aa4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 TRBV27A0A0K0K1C4 114 aa4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 A8MWL6 223 aa4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 TSHBP01222 138 aa4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 SRSF9Q13242 221 aaKnown RBP eCLIP4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 CD164L2Q6UWJ8 174 aa4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 TMEM101Q96IK0 257 aa4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 BTF3L4Q96K17 158 aa4.91□□□□□ -1.62
MS4A6A-220ENST00000533989 CCL25O15444 150 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 PMCHP20382 165 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 XCL1P47992 114 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 POLR2KP53803 58 aaKnown RBP4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 REG3GQ6UW15 175 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 LYPD6BQ8NI32 183 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 MRAP2Q96G30 205 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 CARD19Q96LW7 228 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 TMEM191AQ9H0A3 160 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 ST20Q9HBF5 79 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 CDC42SE2Q9NRR3 84 aa4.9□□□□□ -1.63
MS4A6A-220ENST00000533989 GATCO43716 136 aaKnown RBP4.89□□□□□ -1.63
MS4A6A-220ENST00000533989 SYCNQ0VAF6 134 aa4.89□□□□□ -1.63
MS4A6A-220ENST00000533989 SS18Q15532 418 aa4.89□□□□□ -1.63
MS4A6A-220ENST00000533989 Q6ZRP5 223 aa4.89□□□□□ -1.63
MS4A6A-220ENST00000533989 ZNF664Q8N3J9 261 aa4.89□□□□□ -1.63
MS4A6A-220ENST00000533989 CSDC2Q9Y534 153 aaKnown RBP4.89□□□□□ -1.63
MS4A6A-220ENST00000533989 A0A1B0GUT8 65 aa4.88□□□□□ -1.63
MS4A6A-220ENST00000533989 C1orf196B1AJZ1 125 aa4.88□□□□□ -1.63
MS4A6A-220ENST00000533989 GAS8-AS1O95177 125 aa4.88□□□□□ -1.63
MS4A6A-220ENST00000533989 BLOC1S1P78537 153 aa4.88□□□□□ -1.63
MS4A6A-220ENST00000533989 TSKUQ8WUA8 353 aa4.88□□□□□ -1.63
MS4A6A-220ENST00000533989 ISOC2Q96AB3 205 aa4.88□□□□□ -1.63
MS4A6A-220ENST00000533989 BORCS7Q96B45 105 aa4.88□□□□□ -1.63
MS4A6A-220ENST00000533989 TMEM242Q9NWH2 141 aa4.88□□□□□ -1.63
MS4A6A-220ENST00000533989 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 C7orf77A4D0Y5 90 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 HIGD1CA8MV81 97 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 COX7A2LO14548 114 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 VCYO14598 125 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 PPP1R17O96001 155 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 RAB4AP20338 218 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 CAMPP49913 170 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 SMAGPQ0VAQ4 97 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 LINC01551Q86U37 167 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 C2orf48Q96LS8 159 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 OSTCQ9NRP0 149 aa4.87□□□□□ -1.63
MS4A6A-220ENST00000533989 IGLV4-69A0A075B6H9 119 aa4.86□□□□□ -1.63
MS4A6A-220ENST00000533989 APOMO95445 188 aa4.86□□□□□ -1.63
MS4A6A-220ENST00000533989 NUP35Q8NFH5 326 aa4.86□□□□□ -1.63
MS4A6A-220ENST00000533989 LINC00526Q96FQ7 95 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms