RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TMEM241Q24JQ0 296 aa6.75□□□□□ -1.33
CAPN1-225ENST00000533704 LBHQ53QV2 105 aaPredicted RBP6.75□□□□□ -1.33
CAPN1-225ENST00000533704 ST20Q9HBF5 79 aa6.75□□□□□ -1.33
CAPN1-225ENST00000533704 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
CAPN1-225ENST00000533704 TSTD3H0UI37 97 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 J3QL48 77 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 NDUFS6O75380 124 aaKnown RBP6.74□□□□□ -1.33
CAPN1-225ENST00000533704 RIGQ13278 110 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 AMN1Q8IY45 258 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 C9orf163Q8N9P6 203 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 ISOC2Q96AB3 205 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 BTF3L4Q96K17 158 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 TMEM191AQ9H0A3 160 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 TMEM242Q9NWH2 141 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 V9GYV3 84 aa6.74□□□□□ -1.33
CAPN1-225ENST00000533704 TRBV6-5A0A0K0K1A5 114 aa6.73□□□□□ -1.33
CAPN1-225ENST00000533704 C9JQL5 133 aa6.73□□□□□ -1.33
CAPN1-225ENST00000533704 SMKR1H3BMG3 65 aa6.73□□□□□ -1.33
CAPN1-225ENST00000533704 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
CAPN1-225ENST00000533704 RPL23P62829 140 aaKnown RBP6.73□□□□□ -1.33
CAPN1-225ENST00000533704 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
CAPN1-225ENST00000533704 CHCHD10Q8WYQ3 142 aaPredicted RBP6.73□□□□□ -1.33
CAPN1-225ENST00000533704 RNF185Q96GF1 192 aa6.73□□□□□ -1.33
CAPN1-225ENST00000533704 TMEM101Q96IK0 257 aa6.73□□□□□ -1.33
CAPN1-225ENST00000533704 NAT8Q9UHE5 227 aa6.73□□□□□ -1.33
CAPN1-225ENST00000533704 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
CAPN1-225ENST00000533704 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.72□□□□□ -1.33
CAPN1-225ENST00000533704 C7orf77A4D0Y5 90 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 FAM231BA6NCW3 169 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 H7C423 109 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 TSHBP01222 138 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 RAB4AP20338 218 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 SRSF3P84103 164 aaKnown RBP6.72□□□□□ -1.33
CAPN1-225ENST00000533704 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 OR5A1Q8NGJ0 315 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 DPH3Q96FX2 82 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 MRAP2Q96G30 205 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 SMDT1Q9H4I9 107 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 NAT8BQ9UHF3 227 aa6.72□□□□□ -1.33
CAPN1-225ENST00000533704 IGHV3-64A0A075B6Q5 118 aa6.71□□□□□ -1.34
CAPN1-225ENST00000533704 PANO1I0J062 215 aa6.71□□□□□ -1.34
CAPN1-225ENST00000533704 CAMPP49913 170 aa6.71□□□□□ -1.34
CAPN1-225ENST00000533704 CNBPP62633 177 aaKnown RBP6.71□□□□□ -1.34
CAPN1-225ENST00000533704 CFAP161Q6P656 301 aa6.71□□□□□ -1.34
CAPN1-225ENST00000533704 C15orf56Q8N910 161 aa6.71□□□□□ -1.34
CAPN1-225ENST00000533704 SLPIP03973 132 aa6.7□□□□□ -1.34
CAPN1-225ENST00000533704 ESDP10768 282 aa6.7□□□□□ -1.34
CAPN1-225ENST00000533704 ZNF25P17030 456 aaPredicted RBP6.7□□□□□ -1.34
CAPN1-225ENST00000533704 FCER1GP30273 86 aa6.7□□□□□ -1.34
CAPN1-225ENST00000533704 XCL1P47992 114 aa6.7□□□□□ -1.34
CAPN1-225ENST00000533704 POLR2KP53803 58 aaKnown RBP6.7□□□□□ -1.34
CAPN1-225ENST00000533704 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
CAPN1-225ENST00000533704 SDIM1Q6ZPB5 146 aa6.7□□□□□ -1.34
CAPN1-225ENST00000533704 MYCBP2O75592 4640 aa6.69□□□□□ -1.34
CAPN1-225ENST00000533704 VCYO14598 125 aa6.69□□□□□ -1.34
CAPN1-225ENST00000533704 PPP1R2P9O14990 202 aa6.69□□□□□ -1.34
CAPN1-225ENST00000533704 CCL25O15444 150 aa6.69□□□□□ -1.34
CAPN1-225ENST00000533704 CHTF8P0CG12 524 aa6.69□□□□□ -1.34
CAPN1-225ENST00000533704 MRPL51Q4U2R6 128 aaKnown RBP6.69□□□□□ -1.34
CAPN1-225ENST00000533704 C2orf88Q9BSF0 95 aa6.69□□□□□ -1.34
CAPN1-225ENST00000533704 TRBV27A0A0K0K1C4 114 aa6.68□□□□□ -1.34
CAPN1-225ENST00000533704 LINC00959A0A1B0GUT2 108 aa6.68□□□□□ -1.34
CAPN1-225ENST00000533704 SMIM27A0A1W2PRY6 76 aa6.68□□□□□ -1.34
CAPN1-225ENST00000533704 PPP1R17O96001 155 aa6.68□□□□□ -1.34
CAPN1-225ENST00000533704 DDTP30046 118 aa6.68□□□□□ -1.34
CAPN1-225ENST00000533704 SUMO2P61956 95 aaKnown RBP6.68□□□□□ -1.34
CAPN1-225ENST00000533704 FOXI1Q12951 378 aa6.68□□□□□ -1.34
CAPN1-225ENST00000533704 SS18Q15532 418 aa6.68□□□□□ -1.34
CAPN1-225ENST00000533704 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
CAPN1-225ENST00000533704 NRACQ8N912 160 aa6.68□□□□□ -1.34
CAPN1-225ENST00000533704 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 A0A1B0GV90 55 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 CKS2P33552 79 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 NDUFA6P56556 154 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 KRTAP10-4P60372 401 aaPredicted RBP6.67□□□□□ -1.34
CAPN1-225ENST00000533704 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
CAPN1-225ENST00000533704 FAM104BQ5XKR9 115 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 ZNF664Q8N3J9 261 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 LINC00526Q96FQ7 95 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 C14orf144Q96I85 54 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 KIR2DL4Q99706 377 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 CDC42SE2Q9NRR3 84 aa6.67□□□□□ -1.34
CAPN1-225ENST00000533704 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
CAPN1-225ENST00000533704 COX6A2Q02221 97 aa6.66□□□□□ -1.34
CAPN1-225ENST00000533704 PYY3Q5JQD4 70 aa6.66□□□□□ -1.34
CAPN1-225ENST00000533704 MRPL52Q86TS9 123 aaKnown RBP6.66□□□□□ -1.34
CAPN1-225ENST00000533704 A0A087WYN8 130 aa6.65□□□□□ -1.34
CAPN1-225ENST00000533704 IGHV1-58A0A0C4DH39 117 aa6.65□□□□□ -1.34
CAPN1-225ENST00000533704 A0A1B0GW15 77 aa6.65□□□□□ -1.34
CAPN1-225ENST00000533704 KRTAP29-1A8MX34 341 aaPredicted RBP6.65□□□□□ -1.34
CAPN1-225ENST00000533704 SMAGPQ0VAQ4 97 aa6.65□□□□□ -1.34
CAPN1-225ENST00000533704 MAJINQ3KP22 176 aa6.65□□□□□ -1.34
CAPN1-225ENST00000533704 OR10D4PQ8NGN7 298 aa6.65□□□□□ -1.34
CAPN1-225ENST00000533704 PRSS3P2Q8NHM4 247 aa6.65□□□□□ -1.34
CAPN1-225ENST00000533704 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.34
CAPN1-225ENST00000533704 HERC1Q15751 4861 aa6.64□□□□□ -1.35
CAPN1-225ENST00000533704 TRAV13-1A0A0B4J241 112 aa6.64□□□□□ -1.35
CAPN1-225ENST00000533704 D6R8Y8 96 aa6.64□□□□□ -1.35
CAPN1-225ENST00000533704 TCAPO15273 167 aa6.64□□□□□ -1.35
CAPN1-225ENST00000533704 TNFRSF6BO95407 300 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms