RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 KIR2DL4Q99706 377 aa9.11□□□□□ -0.95
TSPAN4-220ENST00000532375 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
TSPAN4-220ENST00000532375 FCER1GP30273 86 aa9.1□□□□□ -0.95
TSPAN4-220ENST00000532375 XGP55808 180 aa9.1□□□□□ -0.95
TSPAN4-220ENST00000532375 RHEBQ15382 184 aa9.1□□□□□ -0.95
TSPAN4-220ENST00000532375 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
TSPAN4-220ENST00000532375 CSDC2Q9Y534 153 aaKnown RBP9.1□□□□□ -0.95
TSPAN4-220ENST00000532375 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.09□□□□□ -0.95
TSPAN4-220ENST00000532375 OR5A1Q8NGJ0 315 aa9.09□□□□□ -0.95
TSPAN4-220ENST00000532375 LAMTOR2Q9Y2Q5 125 aa9.09□□□□□ -0.95
TSPAN4-220ENST00000532375 TCAPO15273 167 aa9.08□□□□□ -0.96
TSPAN4-220ENST00000532375 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
TSPAN4-220ENST00000532375 PRSS1P07477 247 aa9.08□□□□□ -0.96
TSPAN4-220ENST00000532375 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
TSPAN4-220ENST00000532375 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
TSPAN4-220ENST00000532375 RPS10P5Q9NQ39 176 aa9.08□□□□□ -0.96
TSPAN4-220ENST00000532375 LINC00959A0A1B0GUT2 108 aa9.07□□□□□ -0.96
TSPAN4-220ENST00000532375 APOC3P02656 99 aa9.07□□□□□ -0.96
TSPAN4-220ENST00000532375 RPL39P62891 51 aaKnown RBP9.07□□□□□ -0.96
TSPAN4-220ENST00000532375 CHCHD10Q8WYQ3 142 aaPredicted RBP9.07□□□□□ -0.96
TSPAN4-220ENST00000532375 FAM30AQ9NZY2 134 aa9.07□□□□□ -0.96
TSPAN4-220ENST00000532375 IGKV3OR2-268A0A0C4DH90 116 aa9.06□□□□□ -0.96
TSPAN4-220ENST00000532375 GAGE12HA6NDE8 117 aa9.06□□□□□ -0.96
TSPAN4-220ENST00000532375 KIAA1644Q3SXP7 199 aa9.06□□□□□ -0.96
TSPAN4-220ENST00000532375 TMEM101Q96IK0 257 aa9.06□□□□□ -0.96
TSPAN4-220ENST00000532375 GNB1LQ9BYB4 327 aa9.06□□□□□ -0.96
TSPAN4-220ENST00000532375 KRTAP4-5Q9BYR2 181 aa9.06□□□□□ -0.96
TSPAN4-220ENST00000532375 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
TSPAN4-220ENST00000532375 SLPIP03973 132 aa9.05□□□□□ -0.96
TSPAN4-220ENST00000532375 S100PP25815 95 aa9.05□□□□□ -0.96
TSPAN4-220ENST00000532375 FOXI1Q12951 378 aa9.05□□□□□ -0.96
TSPAN4-220ENST00000532375 LINC01620Q4KN68 170 aa9.05□□□□□ -0.96
TSPAN4-220ENST00000532375 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
TSPAN4-220ENST00000532375 Q6ZSA8 131 aa9.05□□□□□ -0.96
TSPAN4-220ENST00000532375 Q8N8P6 123 aa9.05□□□□□ -0.96
TSPAN4-220ENST00000532375 Q6ZUT4 128 aa9.04□□□□□ -0.96
TSPAN4-220ENST00000532375 C15orf56Q8N910 161 aa9.04□□□□□ -0.96
TSPAN4-220ENST00000532375 OPRPNQ99935 248 aaPredicted RBP9.04□□□□□ -0.96
TSPAN4-220ENST00000532375 MAP1LC3AQ9H492 121 aa9.04□□□□□ -0.96
TSPAN4-220ENST00000532375 SNAPINO95295 136 aa9.03□□□□□ -0.96
TSPAN4-220ENST00000532375 RNASE13Q5GAN3 156 aaKnown RBP9.03□□□□□ -0.96
TSPAN4-220ENST00000532375 DGAT2L7PQ6IED9 249 aa9.03□□□□□ -0.96
TSPAN4-220ENST00000532375 SLC7A5P1Q8MH63 180 aa9.03□□□□□ -0.96
TSPAN4-220ENST00000532375 SVBPQ8N300 66 aa9.03□□□□□ -0.96
TSPAN4-220ENST00000532375 TMEM18Q96B42 140 aa9.03□□□□□ -0.96
TSPAN4-220ENST00000532375 YPEL4Q96NS1 127 aa9.03□□□□□ -0.96
TSPAN4-220ENST00000532375 ABCA13Q86UQ4 5058 aa9.02□□□□□ -0.96
TSPAN4-220ENST00000532375 TGIF2-C20orf24A0A0A6YYL0 155 aa9.02□□□□□ -0.97
TSPAN4-220ENST00000532375 CCL25O15444 150 aa9.02□□□□□ -0.97
TSPAN4-220ENST00000532375 IFI27P40305 119 aaPredicted RBP9.02□□□□□ -0.97
TSPAN4-220ENST00000532375 MRPS36P82909 103 aaKnown RBP9.02□□□□□ -0.97
TSPAN4-220ENST00000532375 COX19Q49B96 90 aa9.02□□□□□ -0.97
TSPAN4-220ENST00000532375 C9orf163Q8N9P6 203 aa9.02□□□□□ -0.97
TSPAN4-220ENST00000532375 ALKBH7Q9BT30 221 aaPredicted RBP9.02□□□□□ -0.97
TSPAN4-220ENST00000532375 SPANXA1Q9NS26 97 aa9.02□□□□□ -0.97
TSPAN4-220ENST00000532375 RAB5AP20339 215 aa9.01□□□□□ -0.97
TSPAN4-220ENST00000532375 XCL1P47992 114 aa9.01□□□□□ -0.97
TSPAN4-220ENST00000532375 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
TSPAN4-220ENST00000532375 CD164L2Q6UWJ8 174 aa9.01□□□□□ -0.97
TSPAN4-220ENST00000532375 PYGO1Q9Y3Y4 419 aa9.01□□□□□ -0.97
TSPAN4-220ENST00000532375 K7EMI3 77 aa9□□□□□ -0.97
TSPAN4-220ENST00000532375 MT-ND6P03923 174 aa9□□□□□ -0.97
TSPAN4-220ENST00000532375 CNBPP62633 177 aaKnown RBP9□□□□□ -0.97
TSPAN4-220ENST00000532375 HAMPP81172 84 aa9□□□□□ -0.97
TSPAN4-220ENST00000532375 SS18Q15532 418 aa9□□□□□ -0.97
TSPAN4-220ENST00000532375 NDUFA5Q16718 116 aa9□□□□□ -0.97
TSPAN4-220ENST00000532375 Q8N1X5 172 aa9□□□□□ -0.97
TSPAN4-220ENST00000532375 LINC01546A6NGU7 62 aa8.99□□□□□ -0.97
TSPAN4-220ENST00000532375 C1orf196B1AJZ1 125 aa8.99□□□□□ -0.97
TSPAN4-220ENST00000532375 MRPL18Q9H0U6 180 aaKnown RBP8.99□□□□□ -0.97
TSPAN4-220ENST00000532375 NXT2Q9NPJ8 142 aaKnown RBP8.99□□□□□ -0.97
TSPAN4-220ENST00000532375 IGLV4-3A0A075B6K6 122 aa8.98□□□□□ -0.97
TSPAN4-220ENST00000532375 GVQW2A0A096LPI5 108 aaPredicted RBP8.98□□□□□ -0.97
TSPAN4-220ENST00000532375 hDV102S1A0JD36 115 aa8.98□□□□□ -0.97
TSPAN4-220ENST00000532375 IGIPA6NJ69 53 aa8.98□□□□□ -0.97
TSPAN4-220ENST00000532375 C2orf66Q6UXQ4 117 aa8.98□□□□□ -0.97
TSPAN4-220ENST00000532375 SDIM1Q6ZPB5 146 aa8.98□□□□□ -0.97
TSPAN4-220ENST00000532375 TRAV13-1A0A0B4J241 112 aa8.97□□□□□ -0.97
TSPAN4-220ENST00000532375 FABP9Q0Z7S8 132 aa8.97□□□□□ -0.97
TSPAN4-220ENST00000532375 ORMDL2Q53FV1 153 aa8.97□□□□□ -0.97
TSPAN4-220ENST00000532375 CFAP161Q6P656 301 aa8.97□□□□□ -0.97
TSPAN4-220ENST00000532375 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
TSPAN4-220ENST00000532375 LINC00173Q6ZV60 143 aa8.96□□□□□ -0.98
TSPAN4-220ENST00000532375 CYSLTR1Q9Y271 337 aa8.96□□□□□ -0.98
TSPAN4-220ENST00000532375 IGHV3OR16-9A0A0B4J2B5 98 aa8.95□□□□□ -0.98
TSPAN4-220ENST00000532375 IGHV1-58A0A0C4DH39 117 aa8.95□□□□□ -0.98
TSPAN4-220ENST00000532375 PANO1I0J062 215 aa8.95□□□□□ -0.98
TSPAN4-220ENST00000532375 ZC2HC1BQ5TFG8 222 aa8.95□□□□□ -0.98
TSPAN4-220ENST00000532375 URB1-AS1Q96HZ7 61 aa8.95□□□□□ -0.98
TSPAN4-220ENST00000532375 AMELXQ99217 191 aa8.95□□□□□ -0.98
TSPAN4-220ENST00000532375 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
TSPAN4-220ENST00000532375 SMR3BP02814 79 aaPredicted RBP8.94□□□□□ -0.98
TSPAN4-220ENST00000532375 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
TSPAN4-220ENST00000532375 TOMM6Q96B49 74 aa8.94□□□□□ -0.98
TSPAN4-220ENST00000532375 LINC00526Q96FQ7 95 aa8.94□□□□□ -0.98
TSPAN4-220ENST00000532375 CHAC1Q9BUX1 264 aa8.94□□□□□ -0.98
TSPAN4-220ENST00000532375 TRAPPC1Q9Y5R8 145 aa8.94□□□□□ -0.98
TSPAN4-220ENST00000532375 NPSP0C0P6 89 aa8.93□□□□□ -0.98
TSPAN4-220ENST00000532375 COX6A2Q02221 97 aa8.93□□□□□ -0.98
TSPAN4-220ENST00000532375 LINC00242Q5T6M2 205 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms