RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SMIM17P0DL12 118 aa11.42□□□□□ -0.58
PKP3-208ENST00000531857 G0S2P27469 103 aa11.42□□□□□ -0.58
PKP3-208ENST00000531857 RHOHQ15669 191 aa11.42□□□□□ -0.58
PKP3-208ENST00000531857 ATP6V0E2Q8NHE4 81 aa11.42□□□□□ -0.58
PKP3-208ENST00000531857 TM2D2Q9BX73 214 aa11.42□□□□□ -0.58
PKP3-208ENST00000531857 GTSF1LQ9H1H1 148 aa11.42□□□□□ -0.58
PKP3-208ENST00000531857 SCXQ7RTU7 201 aa11.41□□□□□ -0.58
PKP3-208ENST00000531857 C20orf78Q9BR46 151 aa11.41□□□□□ -0.58
PKP3-208ENST00000531857 LRP1Q07954 4544 aaKnown RBP11.4□□□□□ -0.58
PKP3-208ENST00000531857 RNASE3P12724 160 aaKnown RBP11.4□□□□□ -0.58
PKP3-208ENST00000531857 KRTAP10-4P60372 401 aaPredicted RBP11.4□□□□□ -0.58
PKP3-208ENST00000531857 SERTAD4-AS1Q5TG53 156 aa11.4□□□□□ -0.58
PKP3-208ENST00000531857 C9orf85Q96MD7 179 aa11.4□□□□□ -0.58
PKP3-208ENST00000531857 MAP1LC3CQ9BXW4 147 aa11.4□□□□□ -0.58
PKP3-208ENST00000531857 TNFRSF6BO95407 300 aa11.39□□□□□ -0.59
PKP3-208ENST00000531857 KRTDAPP60985 99 aa11.39□□□□□ -0.59
PKP3-208ENST00000531857 RPL32P62910 135 aaKnown RBP11.39□□□□□ -0.59
PKP3-208ENST00000531857 PET117Q6UWS5 81 aa11.39□□□□□ -0.59
PKP3-208ENST00000531857 DAZ4Q86SG3 579 aaKnown RBP11.39□□□□□ -0.59
PKP3-208ENST00000531857 Q8N8P6 123 aa11.39□□□□□ -0.59
PKP3-208ENST00000531857 BAALCQ8WXS3 180 aa11.39□□□□□ -0.59
PKP3-208ENST00000531857 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
PKP3-208ENST00000531857 DAZ3Q9NR90 486 aaKnown RBP11.39□□□□□ -0.59
PKP3-208ENST00000531857 IGHV1-24A0A0C4DH33 117 aa11.38□□□□□ -0.59
PKP3-208ENST00000531857 CIDEAO60543 219 aa11.38□□□□□ -0.59
PKP3-208ENST00000531857 TEX43Q6ZNM6 134 aa11.38□□□□□ -0.59
PKP3-208ENST00000531857 FAM19A2Q8N3H0 131 aa11.38□□□□□ -0.59
PKP3-208ENST00000531857 TRAV8-3A0A0A6YYJ7 113 aa11.37□□□□□ -0.59
PKP3-208ENST00000531857 MUC21A0A0G2JKD1 596 aa11.37□□□□□ -0.59
PKP3-208ENST00000531857 MUC21A0A140T8X8 626 aa11.37□□□□□ -0.59
PKP3-208ENST00000531857 HBDP02042 147 aa11.37□□□□□ -0.59
PKP3-208ENST00000531857 C3orf79P0CE67 100 aa11.37□□□□□ -0.59
PKP3-208ENST00000531857 Q9UF83 564 aa11.37□□□□□ -0.59
PKP3-208ENST00000531857 HMCN2Q8NDA2 5059 aa11.37□□□□□ -0.59
PKP3-208ENST00000531857 PCP4L1A6NKN8 68 aa11.36□□□□□ -0.59
PKP3-208ENST00000531857 TCAPO15273 167 aa11.36□□□□□ -0.59
PKP3-208ENST00000531857 NPYP01303 97 aa11.36□□□□□ -0.59
PKP3-208ENST00000531857 IFI27P40305 119 aaPredicted RBP11.36□□□□□ -0.59
PKP3-208ENST00000531857 SSTP61278 116 aa11.36□□□□□ -0.59
PKP3-208ENST00000531857 DNAJC30Q96LL9 226 aa11.36□□□□□ -0.59
PKP3-208ENST00000531857 UBR4Q5T4S7 5183 aa11.36□□□□□ -0.59
PKP3-208ENST00000531857 LINC00694P0DN24 101 aa11.35□□□□□ -0.59
PKP3-208ENST00000531857 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
PKP3-208ENST00000531857 GAGE12JA6NER3 117 aa11.34□□□□□ -0.59
PKP3-208ENST00000531857 FCER1GP30273 86 aa11.34□□□□□ -0.59
PKP3-208ENST00000531857 GAGE1Q13065 139 aa11.34□□□□□ -0.59
PKP3-208ENST00000531857 GAGE4Q13068 117 aa11.34□□□□□ -0.59
PKP3-208ENST00000531857 GAGE5Q13069 117 aa11.34□□□□□ -0.59
PKP3-208ENST00000531857 GAGE13Q4V321 117 aa11.34□□□□□ -0.59
PKP3-208ENST00000531857 ORMDL2Q53FV1 153 aa11.34□□□□□ -0.59
PKP3-208ENST00000531857 CHAC1Q9BUX1 264 aa11.34□□□□□ -0.59
PKP3-208ENST00000531857 LOC389332A0A1B0GUA5 103 aa11.33□□□□□ -0.6
PKP3-208ENST00000531857 SYS1-DBNDD2H3BUS1 97 aa11.33□□□□□ -0.6
PKP3-208ENST00000531857 H7C1H1 209 aa11.33□□□□□ -0.6
PKP3-208ENST00000531857 NRACQ8N912 160 aa11.33□□□□□ -0.6
PKP3-208ENST00000531857 CIRBP-AS1Q8TBR5 109 aa11.33□□□□□ -0.6
PKP3-208ENST00000531857 A8MWV9 139 aa11.32□□□□□ -0.6
PKP3-208ENST00000531857 ATP5LO75964 103 aa11.32□□□□□ -0.6
PKP3-208ENST00000531857 OXTP01178 125 aa11.32□□□□□ -0.6
PKP3-208ENST00000531857 SUMO2P61956 95 aaKnown RBP11.32□□□□□ -0.6
PKP3-208ENST00000531857 C14orf178Q8N769 122 aaPredicted RBP11.32□□□□□ -0.6
PKP3-208ENST00000531857 KIF25-AS1Q9Y6Z4 181 aa11.32□□□□□ -0.6
PKP3-208ENST00000531857 ZNF664Q8N3J9 261 aa11.31□□□□□ -0.6
PKP3-208ENST00000531857 Q8N976 141 aa11.31□□□□□ -0.6
PKP3-208ENST00000531857 SMIM2Q9BVW6 85 aa11.31□□□□□ -0.6
PKP3-208ENST00000531857 PLA2G2DQ9UNK4 145 aa11.31□□□□□ -0.6
PKP3-208ENST00000531857 FAT3Q8TDW7 4589 aa11.3□□□□□ -0.6
PKP3-208ENST00000531857 TRBV6-5A0A0K0K1A5 114 aa11.3□□□□□ -0.6
PKP3-208ENST00000531857 HSBP1L1C9JCN9 74 aa11.3□□□□□ -0.6
PKP3-208ENST00000531857 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
PKP3-208ENST00000531857 RHODO00212 210 aa11.3□□□□□ -0.6
PKP3-208ENST00000531857 NCR2O95944 276 aa11.3□□□□□ -0.6
PKP3-208ENST00000531857 ZFP2Q6ZN57 461 aa11.3□□□□□ -0.6
PKP3-208ENST00000531857 JPT2Q9H910 190 aa11.3□□□□□ -0.6
PKP3-208ENST00000531857 COX11Q9Y6N1 276 aa11.3□□□□□ -0.6
PKP3-208ENST00000531857 IGKV2D-24A0A075B6R9 120 aa11.29□□□□□ -0.6
PKP3-208ENST00000531857 MGPP08493 103 aa11.29□□□□□ -0.6
PKP3-208ENST00000531857 MRPL52Q86TS9 123 aaKnown RBP11.29□□□□□ -0.6
PKP3-208ENST00000531857 ST20Q9HBF5 79 aa11.29□□□□□ -0.6
PKP3-208ENST00000531857 VCYO14598 125 aa11.28□□□□□ -0.6
PKP3-208ENST00000531857 DDTP30046 118 aa11.28□□□□□ -0.6
PKP3-208ENST00000531857 LINC01545Q5VT33 79 aa11.28□□□□□ -0.6
PKP3-208ENST00000531857 UFSP1Q6NVU6 142 aa11.28□□□□□ -0.6
PKP3-208ENST00000531857 RMI2Q96E14 147 aa11.28□□□□□ -0.6
PKP3-208ENST00000531857 KLK12Q9UKR0 248 aa11.28□□□□□ -0.6
PKP3-208ENST00000531857 IFI27L1Q96BM0 104 aa11.27□□□□□ -0.61
PKP3-208ENST00000531857 F5H697 171 aa11.26□□□□□ -0.61
PKP3-208ENST00000531857 KIR2DL4Q99706 377 aa11.26□□□□□ -0.61
PKP3-208ENST00000531857 LBHQ53QV2 105 aaPredicted RBP11.25□□□□□ -0.61
PKP3-208ENST00000531857 UBE2WQ96B02 151 aa11.25□□□□□ -0.61
PKP3-208ENST00000531857 MIEN1Q9BRT3 115 aa11.25□□□□□ -0.61
PKP3-208ENST00000531857 PKHD1L1Q86WI1 4243 aa11.25□□□□□ -0.61
PKP3-208ENST00000531857 A0A096LNJ9 63 aa11.24□□□□□ -0.61
PKP3-208ENST00000531857 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
PKP3-208ENST00000531857 SUMO4Q6EEV6 95 aa11.24□□□□□ -0.61
PKP3-208ENST00000531857 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
PKP3-208ENST00000531857 POLR2KP53803 58 aaKnown RBP11.23□□□□□ -0.61
PKP3-208ENST00000531857 SPATA45Q537H7 98 aa11.23□□□□□ -0.61
PKP3-208ENST00000531857 UQCR10Q9UDW1 63 aa11.23□□□□□ -0.61
PKP3-208ENST00000531857 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms