RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CHCHD10Q8WYQ3 142 aaPredicted RBP5.54□□□□□ -1.52
USF1-210ENST00000531842 LINC00526Q96FQ7 95 aa5.54□□□□□ -1.52
USF1-210ENST00000531842 OSTCQ9NRP0 149 aa5.54□□□□□ -1.52
USF1-210ENST00000531842 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.53□□□□□ -1.52
USF1-210ENST00000531842 IGKV2-29A2NJV5 120 aaPredicted RBP5.53□□□□□ -1.52
USF1-210ENST00000531842 A8MWL6 223 aa5.53□□□□□ -1.52
USF1-210ENST00000531842 APCSP02743 223 aa5.53□□□□□ -1.52
USF1-210ENST00000531842 NUP35Q8NFH5 326 aa5.53□□□□□ -1.52
USF1-210ENST00000531842 FAM231BA6NCW3 169 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 FGF6P10767 208 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 RAB4AP20338 218 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 PMCHP20382 165 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 XCL1P47992 114 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 IFITM2Q01629 132 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 TMEM241Q24JQ0 296 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 REG3GQ6UW15 175 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 SPINK6Q6UWN8 80 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 TMEM101Q96IK0 257 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 BTF3L4Q96K17 158 aa5.52□□□□□ -1.53
USF1-210ENST00000531842 A0A1B0GUT8 65 aa5.51□□□□□ -1.53
USF1-210ENST00000531842 NCR2O95944 276 aa5.51□□□□□ -1.53
USF1-210ENST00000531842 TMEM191AQ9H0A3 160 aa5.51□□□□□ -1.53
USF1-210ENST00000531842 GVQW2A0A096LPI5 108 aaPredicted RBP5.5□□□□□ -1.53
USF1-210ENST00000531842 TRBV6-5A0A0K0K1A5 114 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 SMIM27A0A1W2PRY6 76 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 SDHAF1A6NFY7 115 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 SMKR1H3BMG3 65 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 H7C423 109 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 I3L3M4 83 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 POLR2KP53803 58 aaKnown RBP5.5□□□□□ -1.53
USF1-210ENST00000531842 FOXI1Q12951 378 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 FAM74A3Q4VXF1 159 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 AMN1Q8IY45 258 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 PRR26Q8N8Z3 221 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 OR5A1Q8NGJ0 315 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 BORCS7Q96B45 105 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 LINC00474Q9P2X8 69 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 NAT8Q9UHE5 227 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 PKIGQ9Y2B9 76 aa5.5□□□□□ -1.53
USF1-210ENST00000531842 IGHV1-58A0A0C4DH39 117 aa5.49□□□□□ -1.53
USF1-210ENST00000531842 CCL25O15444 150 aa5.49□□□□□ -1.53
USF1-210ENST00000531842 TSHBP01222 138 aa5.49□□□□□ -1.53
USF1-210ENST00000531842 ZNF25P17030 456 aaPredicted RBP5.49□□□□□ -1.53
USF1-210ENST00000531842 PEA15Q15121 130 aa5.49□□□□□ -1.53
USF1-210ENST00000531842 ADIRFQ15847 76 aa5.49□□□□□ -1.53
USF1-210ENST00000531842 NRACQ8N912 160 aa5.49□□□□□ -1.53
USF1-210ENST00000531842 SMDT1Q9H4I9 107 aa5.49□□□□□ -1.53
USF1-210ENST00000531842 ST20Q9HBF5 79 aa5.49□□□□□ -1.53
USF1-210ENST00000531842 LINC00959A0A1B0GUT2 108 aa5.48□□□□□ -1.53
USF1-210ENST00000531842 A0A1B0GXF2 115 aa5.48□□□□□ -1.53
USF1-210ENST00000531842 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
USF1-210ENST00000531842 ESDP10768 282 aa5.48□□□□□ -1.53
USF1-210ENST00000531842 SS18Q15532 418 aa5.48□□□□□ -1.53
USF1-210ENST00000531842 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
USF1-210ENST00000531842 MRAP2Q96G30 205 aa5.48□□□□□ -1.53
USF1-210ENST00000531842 CARD19Q96LW7 228 aa5.48□□□□□ -1.53
USF1-210ENST00000531842 SYCNQ0VAF6 134 aa5.47□□□□□ -1.53
USF1-210ENST00000531842 MRPL51Q4U2R6 128 aaKnown RBP5.47□□□□□ -1.53
USF1-210ENST00000531842 FAM104BQ5XKR9 115 aa5.47□□□□□ -1.53
USF1-210ENST00000531842 FAM104AQ969W3 186 aa5.47□□□□□ -1.53
USF1-210ENST00000531842 TMEM242Q9NWH2 141 aa5.47□□□□□ -1.53
USF1-210ENST00000531842 NAT8BQ9UHF3 227 aa5.47□□□□□ -1.53
USF1-210ENST00000531842 TRBV27A0A0K0K1C4 114 aa5.46□□□□□ -1.54
USF1-210ENST00000531842 A0A1W2PNN7 141 aa5.46□□□□□ -1.54
USF1-210ENST00000531842 ADCYAP1P18509 176 aa5.46□□□□□ -1.54
USF1-210ENST00000531842 MALP21145 153 aa5.46□□□□□ -1.54
USF1-210ENST00000531842 GAGE2BQ13066 116 aa5.46□□□□□ -1.54
USF1-210ENST00000531842 CD164L2Q6UWJ8 174 aa5.46□□□□□ -1.54
USF1-210ENST00000531842 Q6ZRP5 223 aa5.46□□□□□ -1.54
USF1-210ENST00000531842 ZNF664Q8N3J9 261 aa5.46□□□□□ -1.54
USF1-210ENST00000531842 FCER1GP30273 86 aa5.45□□□□□ -1.54
USF1-210ENST00000531842 CAMPP49913 170 aa5.45□□□□□ -1.54
USF1-210ENST00000531842 RIGQ13278 110 aa5.45□□□□□ -1.54
USF1-210ENST00000531842 PRR4Q16378 134 aa5.45□□□□□ -1.54
USF1-210ENST00000531842 CLLU1Q5K131 121 aa5.45□□□□□ -1.54
USF1-210ENST00000531842 CDC42SE2Q9NRR3 84 aa5.45□□□□□ -1.54
USF1-210ENST00000531842 PSORS1C2Q9UIG4 136 aa5.45□□□□□ -1.54
USF1-210ENST00000531842 TRBV24-1A0A075B6N3 115 aa5.44□□□□□ -1.54
USF1-210ENST00000531842 C7orf77A4D0Y5 90 aa5.44□□□□□ -1.54
USF1-210ENST00000531842 C1orf196B1AJZ1 125 aa5.44□□□□□ -1.54
USF1-210ENST00000531842 COX7A2LO14548 114 aa5.44□□□□□ -1.54
USF1-210ENST00000531842 VCYO14598 125 aa5.44□□□□□ -1.54
USF1-210ENST00000531842 SMAGPQ0VAQ4 97 aa5.44□□□□□ -1.54
USF1-210ENST00000531842 MRPL54Q6P161 138 aaKnown RBP5.44□□□□□ -1.54
USF1-210ENST00000531842 KRTAP11-1Q8IUC1 163 aa5.44□□□□□ -1.54
USF1-210ENST00000531842 IGLV4-69A0A075B6H9 119 aa5.43□□□□□ -1.54
USF1-210ENST00000531842 TRAV13-1A0A0B4J241 112 aa5.43□□□□□ -1.54
USF1-210ENST00000531842 LOC107984640A0A0U1RRK4 108 aa5.43□□□□□ -1.54
USF1-210ENST00000531842 PTTG1IPP53801 180 aa5.43□□□□□ -1.54
USF1-210ENST00000531842 SUMO2P61956 95 aaKnown RBP5.43□□□□□ -1.54
USF1-210ENST00000531842 PHF5AQ7RTV0 110 aaKnown RBP5.43□□□□□ -1.54
USF1-210ENST00000531842 MRPL52Q86TS9 123 aaKnown RBP5.43□□□□□ -1.54
USF1-210ENST00000531842 CAMK2N2Q96S95 79 aa5.43□□□□□ -1.54
USF1-210ENST00000531842 D6R8Y8 96 aa5.42□□□□□ -1.54
USF1-210ENST00000531842 TNFRSF6BO95407 300 aa5.42□□□□□ -1.54
USF1-210ENST00000531842 PPP1R17O96001 155 aa5.42□□□□□ -1.54
USF1-210ENST00000531842 NPYP01303 97 aa5.42□□□□□ -1.54
USF1-210ENST00000531842 MT-ND6P03923 174 aa5.42□□□□□ -1.54
USF1-210ENST00000531842 RNASE13Q5GAN3 156 aaKnown RBP5.42□□□□□ -1.54
USF1-210ENST00000531842 C1orf137Q5JT78 98 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms