RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 ORMDL3Q8N138 153 aa9.44□□□□□ -0.9
FOXR1-202ENST00000531539 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
FOXR1-202ENST00000531539 CTDSP1Q9GZU7 261 aa9.44□□□□□ -0.9
FOXR1-202ENST00000531539 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
FOXR1-202ENST00000531539 RPL32P62910 135 aaKnown RBP9.43□□□□□ -0.9
FOXR1-202ENST00000531539 ZNF664Q8N3J9 261 aa9.43□□□□□ -0.9
FOXR1-202ENST00000531539 CLRN3Q8NCR9 226 aa9.43□□□□□ -0.9
FOXR1-202ENST00000531539 IMMP2LQ96T52 175 aa9.43□□□□□ -0.9
FOXR1-202ENST00000531539 SMIM2Q9BVW6 85 aa9.43□□□□□ -0.9
FOXR1-202ENST00000531539 CDC42SE2Q9NRR3 84 aa9.43□□□□□ -0.9
FOXR1-202ENST00000531539 APOBP04114 4563 aaKnown RBP9.43□□□□□ -0.9
FOXR1-202ENST00000531539 PHOX2AO14813 284 aa9.42□□□□□ -0.9
FOXR1-202ENST00000531539 TCAPO15273 167 aa9.42□□□□□ -0.9
FOXR1-202ENST00000531539 SMAGPQ0VAQ4 97 aa9.42□□□□□ -0.9
FOXR1-202ENST00000531539 TMEM18Q96B42 140 aa9.42□□□□□ -0.9
FOXR1-202ENST00000531539 HSPG2P98160 4391 aa9.42□□□□□ -0.9
FOXR1-202ENST00000531539 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
FOXR1-202ENST00000531539 LOC389332A0A1B0GUA5 103 aa9.41□□□□□ -0.9
FOXR1-202ENST00000531539 LINC00959A0A1B0GUT2 108 aa9.41□□□□□ -0.9
FOXR1-202ENST00000531539 hDV102S1A0JD36 115 aa9.41□□□□□ -0.9
FOXR1-202ENST00000531539 SS18Q15532 418 aa9.41□□□□□ -0.9
FOXR1-202ENST00000531539 CCL25O15444 150 aa9.4□□□□□ -0.9
FOXR1-202ENST00000531539 RAB5AP20339 215 aa9.4□□□□□ -0.9
FOXR1-202ENST00000531539 XCL1P47992 114 aa9.4□□□□□ -0.9
FOXR1-202ENST00000531539 CFAP161Q6P656 301 aa9.4□□□□□ -0.9
FOXR1-202ENST00000531539 UBE2D4Q9Y2X8 147 aa9.4□□□□□ -0.9
FOXR1-202ENST00000531539 S100PP25815 95 aa9.39□□□□□ -0.91
FOXR1-202ENST00000531539 RPL39P62891 51 aaKnown RBP9.39□□□□□ -0.91
FOXR1-202ENST00000531539 RNASE13Q5GAN3 156 aaKnown RBP9.39□□□□□ -0.91
FOXR1-202ENST00000531539 C10orf91Q5T1B1 145 aa9.39□□□□□ -0.91
FOXR1-202ENST00000531539 AP5S1Q9NUS5 200 aa9.39□□□□□ -0.91
FOXR1-202ENST00000531539 CSDC2Q9Y534 153 aaKnown RBP9.39□□□□□ -0.91
FOXR1-202ENST00000531539 ABCA13Q86UQ4 5058 aa9.38□□□□□ -0.91
FOXR1-202ENST00000531539 EPM2AB3EWF7 344 aa9.38□□□□□ -0.91
FOXR1-202ENST00000531539 FOXI1Q12951 378 aa9.38□□□□□ -0.91
FOXR1-202ENST00000531539 TIMM21Q9BVV7 248 aa9.38□□□□□ -0.91
FOXR1-202ENST00000531539 RPS10P5Q9NQ39 176 aa9.38□□□□□ -0.91
FOXR1-202ENST00000531539 PRSS47A8MTI9 375 aa9.37□□□□□ -0.91
FOXR1-202ENST00000531539 KIAA1644Q3SXP7 199 aa9.37□□□□□ -0.91
FOXR1-202ENST00000531539 HIGD2BQ4VC39 106 aa9.37□□□□□ -0.91
FOXR1-202ENST00000531539 C9orf163Q8N9P6 203 aa9.37□□□□□ -0.91
FOXR1-202ENST00000531539 MAP1LC3AQ9H492 121 aa9.37□□□□□ -0.91
FOXR1-202ENST00000531539 LAMTOR2Q9Y2Q5 125 aa9.37□□□□□ -0.91
FOXR1-202ENST00000531539 CARHSP1Q9Y2V2 147 aaKnown RBP9.37□□□□□ -0.91
FOXR1-202ENST00000531539 TRAV9-1A0A075B6T8 112 aa9.36□□□□□ -0.91
FOXR1-202ENST00000531539 TRAV13-1A0A0B4J241 112 aa9.36□□□□□ -0.91
FOXR1-202ENST00000531539 C1orf196B1AJZ1 125 aa9.36□□□□□ -0.91
FOXR1-202ENST00000531539 SLPIP03973 132 aa9.36□□□□□ -0.91
FOXR1-202ENST00000531539 Q6ZSA8 131 aa9.36□□□□□ -0.91
FOXR1-202ENST00000531539 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
FOXR1-202ENST00000531539 OPRPNQ99935 248 aaPredicted RBP9.36□□□□□ -0.91
FOXR1-202ENST00000531539 FAM229AH3BQW9 127 aa9.35□□□□□ -0.91
FOXR1-202ENST00000531539 CD164L2Q6UWJ8 174 aa9.35□□□□□ -0.91
FOXR1-202ENST00000531539 Q6ZUT4 128 aa9.35□□□□□ -0.91
FOXR1-202ENST00000531539 Q8N8P6 123 aa9.35□□□□□ -0.91
FOXR1-202ENST00000531539 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
FOXR1-202ENST00000531539 APOC3P02656 99 aa9.34□□□□□ -0.91
FOXR1-202ENST00000531539 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
FOXR1-202ENST00000531539 RHEBQ15382 184 aa9.34□□□□□ -0.91
FOXR1-202ENST00000531539 Q5VSD8 79 aa9.34□□□□□ -0.91
FOXR1-202ENST00000531539 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
FOXR1-202ENST00000531539 SPANXA1Q9NS26 97 aa9.34□□□□□ -0.91
FOXR1-202ENST00000531539 FAM104AQ969W3 186 aa9.33□□□□□ -0.92
FOXR1-202ENST00000531539 DPH3Q96FX2 82 aa9.33□□□□□ -0.92
FOXR1-202ENST00000531539 CHAC1Q9BUX1 264 aa9.33□□□□□ -0.92
FOXR1-202ENST00000531539 IGHV3-64A0A075B6Q5 118 aa9.32□□□□□ -0.92
FOXR1-202ENST00000531539 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
FOXR1-202ENST00000531539 IFI27P40305 119 aaPredicted RBP9.32□□□□□ -0.92
FOXR1-202ENST00000531539 SCXQ7RTU7 201 aa9.32□□□□□ -0.92
FOXR1-202ENST00000531539 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
FOXR1-202ENST00000531539 DNAH8Q96JB1 4490 aa9.32□□□□□ -0.92
FOXR1-202ENST00000531539 MALP21145 153 aa9.31□□□□□ -0.92
FOXR1-202ENST00000531539 MRPS36P82909 103 aaKnown RBP9.31□□□□□ -0.92
FOXR1-202ENST00000531539 NDUFA5Q16718 116 aa9.31□□□□□ -0.92
FOXR1-202ENST00000531539 C5orf38Q86SI9 138 aa9.31□□□□□ -0.92
FOXR1-202ENST00000531539 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
FOXR1-202ENST00000531539 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
FOXR1-202ENST00000531539 NXT2Q9NPJ8 142 aaKnown RBP9.31□□□□□ -0.92
FOXR1-202ENST00000531539 GVQW2A0A096LPI5 108 aaPredicted RBP9.3□□□□□ -0.92
FOXR1-202ENST00000531539 COX7A2LO14548 114 aa9.3□□□□□ -0.92
FOXR1-202ENST00000531539 FABP9Q0Z7S8 132 aa9.3□□□□□ -0.92
FOXR1-202ENST00000531539 COX19Q49B96 90 aa9.3□□□□□ -0.92
FOXR1-202ENST00000531539 ORMDL2Q53FV1 153 aa9.3□□□□□ -0.92
FOXR1-202ENST00000531539 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
FOXR1-202ENST00000531539 IFITM10A6NMD0 228 aa9.29□□□□□ -0.92
FOXR1-202ENST00000531539 ZNF561-AS1K7EIQ3 104 aa9.29□□□□□ -0.92
FOXR1-202ENST00000531539 SNAPINO95295 136 aa9.29□□□□□ -0.92
FOXR1-202ENST00000531539 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
FOXR1-202ENST00000531539 C2orf66Q6UXQ4 117 aa9.29□□□□□ -0.92
FOXR1-202ENST00000531539 PRSS3P2Q8NHM4 247 aa9.29□□□□□ -0.92
FOXR1-202ENST00000531539 MRPL18Q9H0U6 180 aaKnown RBP9.29□□□□□ -0.92
FOXR1-202ENST00000531539 CYSLTR1Q9Y271 337 aa9.29□□□□□ -0.92
FOXR1-202ENST00000531539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.29□□□□□ -0.92
FOXR1-202ENST00000531539 TGIF2-C20orf24A0A0A6YYL0 155 aa9.28□□□□□ -0.92
FOXR1-202ENST00000531539 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
FOXR1-202ENST00000531539 SVBPQ8N300 66 aa9.28□□□□□ -0.92
FOXR1-202ENST00000531539 ALKBH7Q9BT30 221 aaPredicted RBP9.28□□□□□ -0.92
FOXR1-202ENST00000531539 IGLV4-3A0A075B6K6 122 aa9.27□□□□□ -0.93
FOXR1-202ENST00000531539 PANO1I0J062 215 aa9.27□□□□□ -0.93
FOXR1-202ENST00000531539 K7EMI3 77 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms