RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 FGF6P10767 208 aa12.35□□□□□ -0.43
UBXN1-211ENST00000531056 Q5VSD8 79 aa12.35□□□□□ -0.43
UBXN1-211ENST00000531056 AMMECR1LQ6DCA0 310 aa12.35□□□□□ -0.43
UBXN1-211ENST00000531056 PPBPP02775 128 aa12.34□□□□□ -0.43
UBXN1-211ENST00000531056 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
UBXN1-211ENST00000531056 RNASEKQ6P5S7 137 aaKnown RBP12.34□□□□□ -0.43
UBXN1-211ENST00000531056 FAT1Q14517 4588 aa12.33□□□□□ -0.44
UBXN1-211ENST00000531056 ZNF25P17030 456 aaPredicted RBP12.33□□□□□ -0.44
UBXN1-211ENST00000531056 TMEM136Q6ZRR5 245 aa12.33□□□□□ -0.44
UBXN1-211ENST00000531056 D6R8Y8 96 aa12.32□□□□□ -0.44
UBXN1-211ENST00000531056 SUMO2P61956 95 aaKnown RBP12.32□□□□□ -0.44
UBXN1-211ENST00000531056 ORMDL3Q8N138 153 aa12.32□□□□□ -0.44
UBXN1-211ENST00000531056 GNB1LQ9BYB4 327 aa12.32□□□□□ -0.44
UBXN1-211ENST00000531056 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
UBXN1-211ENST00000531056 VPS13BQ7Z7G8 4022 aa12.32□□□□□ -0.44
UBXN1-211ENST00000531056 TRBV24-1A0A075B6N3 115 aa12.31□□□□□ -0.44
UBXN1-211ENST00000531056 TGIF2-C20orf24A0A0A6YYL0 155 aa12.31□□□□□ -0.44
UBXN1-211ENST00000531056 VCYO14598 125 aa12.31□□□□□ -0.44
UBXN1-211ENST00000531056 MT-ND6P03923 174 aa12.31□□□□□ -0.44
UBXN1-211ENST00000531056 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
UBXN1-211ENST00000531056 DGAT2L7PQ6IED9 249 aa12.3□□□□□ -0.44
UBXN1-211ENST00000531056 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
UBXN1-211ENST00000531056 PHOX2AO14813 284 aa12.29□□□□□ -0.44
UBXN1-211ENST00000531056 TNFRSF6BO95407 300 aa12.29□□□□□ -0.44
UBXN1-211ENST00000531056 OR5A1Q8NGJ0 315 aa12.29□□□□□ -0.44
UBXN1-211ENST00000531056 C20orf78Q9BR46 151 aa12.29□□□□□ -0.44
UBXN1-211ENST00000531056 GAGE12HA6NDE8 117 aa12.28□□□□□ -0.44
UBXN1-211ENST00000531056 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
UBXN1-211ENST00000531056 SCXQ7RTU7 201 aa12.28□□□□□ -0.44
UBXN1-211ENST00000531056 CBLN2Q8IUK8 224 aa12.28□□□□□ -0.44
UBXN1-211ENST00000531056 CHCHD10Q8WYQ3 142 aaPredicted RBP12.28□□□□□ -0.44
UBXN1-211ENST00000531056 TMEM101Q96IK0 257 aa12.28□□□□□ -0.44
UBXN1-211ENST00000531056 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
UBXN1-211ENST00000531056 LAMTOR2Q9Y2Q5 125 aa12.28□□□□□ -0.44
UBXN1-211ENST00000531056 NPYP01303 97 aa12.27□□□□□ -0.45
UBXN1-211ENST00000531056 FCER1GP30273 86 aa12.27□□□□□ -0.45
UBXN1-211ENST00000531056 C15orf56Q8N910 161 aa12.27□□□□□ -0.45
UBXN1-211ENST00000531056 C9orf163Q8N9P6 203 aa12.27□□□□□ -0.45
UBXN1-211ENST00000531056 YPEL4Q96NS1 127 aa12.27□□□□□ -0.45
UBXN1-211ENST00000531056 hDV102S1A0JD36 115 aa12.26□□□□□ -0.45
UBXN1-211ENST00000531056 FAM229AH3BQW9 127 aa12.26□□□□□ -0.45
UBXN1-211ENST00000531056 CNBPP62633 177 aaKnown RBP12.26□□□□□ -0.45
UBXN1-211ENST00000531056 KIR2DL4Q99706 377 aa12.26□□□□□ -0.45
UBXN1-211ENST00000531056 CHAC1Q9BUX1 264 aa12.26□□□□□ -0.45
UBXN1-211ENST00000531056 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
UBXN1-211ENST00000531056 CDC42SE2Q9NRR3 84 aa12.26□□□□□ -0.45
UBXN1-211ENST00000531056 LINC00959A0A1B0GUT2 108 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 SLPIP03973 132 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 S100A1P23297 94 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 FABP9Q0Z7S8 132 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 FOXI1Q12951 378 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 KIAA1644Q3SXP7 199 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 SMIM2Q9BVW6 85 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 MAP1LC3AQ9H492 121 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 UBE2D4Q9Y2X8 147 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 TRAPPC1Q9Y5R8 145 aa12.24□□□□□ -0.45
UBXN1-211ENST00000531056 INAFM2P0DMQ5 153 aa12.23□□□□□ -0.45
UBXN1-211ENST00000531056 ZNF664Q8N3J9 261 aa12.23□□□□□ -0.45
UBXN1-211ENST00000531056 CIRBP-AS1Q8TBR5 109 aa12.23□□□□□ -0.45
UBXN1-211ENST00000531056 CSDC2Q9Y534 153 aaKnown RBP12.23□□□□□ -0.45
UBXN1-211ENST00000531056 TCAPO15273 167 aa12.22□□□□□ -0.45
UBXN1-211ENST00000531056 LINC00528Q8N1L1 170 aa12.22□□□□□ -0.45
UBXN1-211ENST00000531056 PRSS47A8MTI9 375 aa12.21□□□□□ -0.45
UBXN1-211ENST00000531056 CCL25O15444 150 aa12.21□□□□□ -0.45
UBXN1-211ENST00000531056 ATP6V1G1O75348 118 aa12.21□□□□□ -0.45
UBXN1-211ENST00000531056 CFAP161Q6P656 301 aa12.21□□□□□ -0.45
UBXN1-211ENST00000531056 SDIM1Q6ZPB5 146 aa12.21□□□□□ -0.45
UBXN1-211ENST00000531056 AP5S1Q9NUS5 200 aa12.21□□□□□ -0.45
UBXN1-211ENST00000531056 XCL1P47992 114 aa12.2□□□□□ -0.46
UBXN1-211ENST00000531056 SMAGPQ0VAQ4 97 aa12.2□□□□□ -0.46
UBXN1-211ENST00000531056 TIMM21Q9BVV7 248 aa12.2□□□□□ -0.46
UBXN1-211ENST00000531056 GVQW2A0A096LPI5 108 aaPredicted RBP12.19□□□□□ -0.46
UBXN1-211ENST00000531056 LOC389332A0A1B0GUA5 103 aa12.19□□□□□ -0.46
UBXN1-211ENST00000531056 SS18Q15532 418 aa12.19□□□□□ -0.46
UBXN1-211ENST00000531056 HIGD2BQ4VC39 106 aa12.19□□□□□ -0.46
UBXN1-211ENST00000531056 TMEM18Q96B42 140 aa12.19□□□□□ -0.46
UBXN1-211ENST00000531056 ALKBH7Q9BT30 221 aaPredicted RBP12.19□□□□□ -0.46
UBXN1-211ENST00000531056 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.19□□□□□ -0.46
UBXN1-211ENST00000531056 PANO1I0J062 215 aa12.18□□□□□ -0.46
UBXN1-211ENST00000531056 SCO1O75880 301 aa12.18□□□□□ -0.46
UBXN1-211ENST00000531056 RAB5AP20339 215 aa12.18□□□□□ -0.46
UBXN1-211ENST00000531056 Q6ZUT4 128 aa12.18□□□□□ -0.46
UBXN1-211ENST00000531056 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
UBXN1-211ENST00000531056 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.17□□□□□ -0.46
UBXN1-211ENST00000531056 RPL39P62891 51 aaKnown RBP12.17□□□□□ -0.46
UBXN1-211ENST00000531056 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
UBXN1-211ENST00000531056 CD164L2Q6UWJ8 174 aa12.17□□□□□ -0.46
UBXN1-211ENST00000531056 Q8N8P6 123 aa12.17□□□□□ -0.46
UBXN1-211ENST00000531056 NXT2Q9NPJ8 142 aaKnown RBP12.17□□□□□ -0.46
UBXN1-211ENST00000531056 SRRM2Q9UQ35 2752 aaKnown RBP12.17□□□□□ -0.46
UBXN1-211ENST00000531056 PLA2G1BP04054 148 aaKnown RBP12.16□□□□□ -0.46
UBXN1-211ENST00000531056 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
UBXN1-211ENST00000531056 FAM104AQ969W3 186 aa12.16□□□□□ -0.46
UBXN1-211ENST00000531056 COLCA2A8K830 154 aa12.15□□□□□ -0.46
UBXN1-211ENST00000531056 IGHV1-58A0A0C4DH39 117 aa12.14□□□□□ -0.47
UBXN1-211ENST00000531056 K7EMI3 77 aa12.14□□□□□ -0.47
UBXN1-211ENST00000531056 PRSS3P2Q8NHM4 247 aa12.14□□□□□ -0.47
UBXN1-211ENST00000531056 SPANXA1Q9NS26 97 aa12.14□□□□□ -0.47
UBXN1-211ENST00000531056 C1orf196B1AJZ1 125 aa12.13□□□□□ -0.47
UBXN1-211ENST00000531056 IFI27P40305 119 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms