RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 BCL2L11O43521 198 aa11.29□□□□□ -0.6
SSRP1-204ENST00000529002 TRAV1-1A0A0B4J248 108 aa11.28□□□□□ -0.6
SSRP1-204ENST00000529002 GIPP09681 153 aaPredicted RBP11.28□□□□□ -0.6
SSRP1-204ENST00000529002 MALP21145 153 aa11.28□□□□□ -0.6
SSRP1-204ENST00000529002 CDC42SE2Q9NRR3 84 aa11.28□□□□□ -0.6
SSRP1-204ENST00000529002 G3V3Q6 166 aa11.27□□□□□ -0.61
SSRP1-204ENST00000529002 ESDP10768 282 aa11.27□□□□□ -0.61
SSRP1-204ENST00000529002 PMCHP20382 165 aa11.27□□□□□ -0.61
SSRP1-204ENST00000529002 CTRLP40313 264 aa11.27□□□□□ -0.61
SSRP1-204ENST00000529002 C9orf62Q8N4C0 152 aa11.27□□□□□ -0.61
SSRP1-204ENST00000529002 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.61
SSRP1-204ENST00000529002 TSHBP01222 138 aa11.26□□□□□ -0.61
SSRP1-204ENST00000529002 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
SSRP1-204ENST00000529002 EIF5AL1Q6IS14 154 aaKnown RBP11.26□□□□□ -0.61
SSRP1-204ENST00000529002 FAM19A5Q7Z5A7 132 aaPredicted RBP11.26□□□□□ -0.61
SSRP1-204ENST00000529002 XKRY2A2RUG3 117 aa11.25□□□□□ -0.61
SSRP1-204ENST00000529002 I3L3M4 83 aa11.25□□□□□ -0.61
SSRP1-204ENST00000529002 COX7A2LO14548 114 aa11.25□□□□□ -0.61
SSRP1-204ENST00000529002 ARPC5O15511 151 aa11.25□□□□□ -0.61
SSRP1-204ENST00000529002 CCL20P78556 96 aa11.25□□□□□ -0.61
SSRP1-204ENST00000529002 C5orf38Q86SI9 138 aa11.25□□□□□ -0.61
SSRP1-204ENST00000529002 KRTAP7-1Q8IUC3 87 aa11.25□□□□□ -0.61
SSRP1-204ENST00000529002 C11orf52Q96A22 123 aa11.25□□□□□ -0.61
SSRP1-204ENST00000529002 RPL13AP40429 203 aaKnown RBP11.24□□□□□ -0.61
SSRP1-204ENST00000529002 C2orf48Q96LS8 159 aa11.24□□□□□ -0.61
SSRP1-204ENST00000529002 MRAP2Q96G30 205 aa11.23□□□□□ -0.61
SSRP1-204ENST00000529002 RNASE7Q9H1E1 156 aaKnown RBP11.23□□□□□ -0.61
SSRP1-204ENST00000529002 MUC17Q685J3 4493 aa11.23□□□□□ -0.61
SSRP1-204ENST00000529002 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
SSRP1-204ENST00000529002 GNG4P50150 75 aa11.22□□□□□ -0.61
SSRP1-204ENST00000529002 SPAG11BQ08648 103 aa11.22□□□□□ -0.61
SSRP1-204ENST00000529002 NUDT10Q8NFP7 164 aa11.22□□□□□ -0.61
SSRP1-204ENST00000529002 NUDT11Q96G61 164 aa11.22□□□□□ -0.61
SSRP1-204ENST00000529002 CNFNQ9BYD5 112 aa11.22□□□□□ -0.61
SSRP1-204ENST00000529002 H2AFB1P0C5Y9 115 aa11.21□□□□□ -0.61
SSRP1-204ENST00000529002 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
SSRP1-204ENST00000529002 GNG13Q9P2W3 67 aa11.21□□□□□ -0.61
SSRP1-204ENST00000529002 TRAV13-1A0A0B4J241 112 aa11.2□□□□□ -0.62
SSRP1-204ENST00000529002 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
SSRP1-204ENST00000529002 C1orf196B1AJZ1 125 aa11.19□□□□□ -0.62
SSRP1-204ENST00000529002 GAGE2EQ4V326 116 aa11.19□□□□□ -0.62
SSRP1-204ENST00000529002 GAGE2DQ9UEU5 116 aa11.19□□□□□ -0.62
SSRP1-204ENST00000529002 UBE2BP63146 152 aa11.18□□□□□ -0.62
SSRP1-204ENST00000529002 RNF151Q2KHN1 245 aa11.18□□□□□ -0.62
SSRP1-204ENST00000529002 TRBV6-5A0A0K0K1A5 114 aa11.17□□□□□ -0.62
SSRP1-204ENST00000529002 SMLR1H3BR10 107 aa11.17□□□□□ -0.62
SSRP1-204ENST00000529002 TSKUQ8WUA8 353 aa11.17□□□□□ -0.62
SSRP1-204ENST00000529002 RETNLBQ9BQ08 111 aa11.17□□□□□ -0.62
SSRP1-204ENST00000529002 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
SSRP1-204ENST00000529002 CARHSP1Q9Y2V2 147 aaKnown RBP11.17□□□□□ -0.62
SSRP1-204ENST00000529002 C7orf77A4D0Y5 90 aa11.16□□□□□ -0.62
SSRP1-204ENST00000529002 UMAD1C9J7I0 102 aa11.16□□□□□ -0.62
SSRP1-204ENST00000529002 M0QXV9 152 aa11.16□□□□□ -0.62
SSRP1-204ENST00000529002 RPP21Q9H633 154 aaKnown RBP11.16□□□□□ -0.62
SSRP1-204ENST00000529002 CRCT1Q9UGL9 99 aa11.16□□□□□ -0.62
SSRP1-204ENST00000529002 A0A087X002 238 aa11.15□□□□□ -0.62
SSRP1-204ENST00000529002 TEX261Q6UWH6 196 aa11.15□□□□□ -0.62
SSRP1-204ENST00000529002 UNQ6190/PRO20217Q6UXQ8 127 aa11.15□□□□□ -0.62
SSRP1-204ENST00000529002 SMIM12Q96EX1 92 aa11.15□□□□□ -0.62
SSRP1-204ENST00000529002 MANBALQ9NQG1 85 aa11.15□□□□□ -0.62
SSRP1-204ENST00000529002 MRPL35Q9NZE8 188 aaKnown RBP11.15□□□□□ -0.62
SSRP1-204ENST00000529002 POLR2KP53803 58 aaKnown RBP11.14□□□□□ -0.63
SSRP1-204ENST00000529002 SMIM15Q7Z3B0 74 aa11.14□□□□□ -0.63
SSRP1-204ENST00000529002 ORAOV1Q8WV07 137 aa11.14□□□□□ -0.63
SSRP1-204ENST00000529002 IMMP2LQ96T52 175 aa11.14□□□□□ -0.63
SSRP1-204ENST00000529002 C6orf48Q9UBA6 75 aa11.14□□□□□ -0.63
SSRP1-204ENST00000529002 Q6ZUT4 128 aa11.13□□□□□ -0.63
SSRP1-204ENST00000529002 MED9Q9NWA0 146 aa11.13□□□□□ -0.63
SSRP1-204ENST00000529002 UBE2D4Q9Y2X8 147 aa11.13□□□□□ -0.63
SSRP1-204ENST00000529002 K7EN84 100 aa11.12□□□□□ -0.63
SSRP1-204ENST00000529002 LCE2DQ5TA82 110 aaPredicted RBP11.12□□□□□ -0.63
SSRP1-204ENST00000529002 TLX1NBP0CAT3 122 aa11.11□□□□□ -0.63
SSRP1-204ENST00000529002 NDUFA1O15239 70 aa11.1□□□□□ -0.63
SSRP1-204ENST00000529002 ZNF861PO60384 105 aa11.1□□□□□ -0.63
SSRP1-204ENST00000529002 OR10D4PQ8NGN7 298 aa11.1□□□□□ -0.63
SSRP1-204ENST00000529002 SMDT1Q9H4I9 107 aa11.1□□□□□ -0.63
SSRP1-204ENST00000529002 BIN3Q9NQY0 253 aa11.1□□□□□ -0.63
SSRP1-204ENST00000529002 FSIP2Q5CZC0 6907 aa11.1□□□□□ -0.63
SSRP1-204ENST00000529002 TRBV27A0A0K0K1C4 114 aa11.09□□□□□ -0.63
SSRP1-204ENST00000529002 OCC1Q8TAD7 63 aa11.09□□□□□ -0.63
SSRP1-204ENST00000529002 CDIP1Q9H305 208 aa11.09□□□□□ -0.63
SSRP1-204ENST00000529002 SMKR1H3BMG3 65 aa11.08□□□□□ -0.64
SSRP1-204ENST00000529002 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.64
SSRP1-204ENST00000529002 TYMSOSQ8TAI1 123 aa11.07□□□□□ -0.64
SSRP1-204ENST00000529002 CSDC2Q9Y534 153 aaKnown RBP11.07□□□□□ -0.64
SSRP1-204ENST00000529002 FCER1GP30273 86 aa11.06□□□□□ -0.64
SSRP1-204ENST00000529002 ANAPC11Q9NYG5 84 aa11.06□□□□□ -0.64
SSRP1-204ENST00000529002 PDE6DO43924 150 aa11.05□□□□□ -0.64
SSRP1-204ENST00000529002 TMEM241Q24JQ0 296 aa11.05□□□□□ -0.64
SSRP1-204ENST00000529002 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
SSRP1-204ENST00000529002 IGHV3OR16-9A0A0B4J2B5 98 aa11.04□□□□□ -0.64
SSRP1-204ENST00000529002 RAB4AP20338 218 aa11.04□□□□□ -0.64
SSRP1-204ENST00000529002 ZNF345Q14585 488 aa11.04□□□□□ -0.64
SSRP1-204ENST00000529002 AMN1Q8IY45 258 aa11.03□□□□□ -0.64
SSRP1-204ENST00000529002 CTDSP1Q9GZU7 261 aa11.03□□□□□ -0.64
SSRP1-204ENST00000529002 F8WDY8 70 aa11.02□□□□□ -0.65
SSRP1-204ENST00000529002 VCYO14598 125 aa11.02□□□□□ -0.65
SSRP1-204ENST00000529002 GATCO43716 136 aaKnown RBP11.02□□□□□ -0.65
SSRP1-204ENST00000529002 KIAA0087Q14695 138 aa11.02□□□□□ -0.65
SSRP1-204ENST00000529002 C2orf82Q6UX34 121 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms