RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 NRACQ8N912 160 aa9.27□□□□□ -0.93
CAPN1-216ENST00000528739 CHAC1Q9BUX1 264 aa9.27□□□□□ -0.93
CAPN1-216ENST00000528739 D6R8Y8 96 aa9.26□□□□□ -0.93
CAPN1-216ENST00000528739 MT-ND4LP03901 98 aa9.26□□□□□ -0.93
CAPN1-216ENST00000528739 PLA2G1BP04054 148 aaKnown RBP9.26□□□□□ -0.93
CAPN1-216ENST00000528739 PNRC1Q12796 327 aaPredicted RBP9.26□□□□□ -0.93
CAPN1-216ENST00000528739 HIGD2BQ4VC39 106 aa9.26□□□□□ -0.93
CAPN1-216ENST00000528739 C9orf163Q8N9P6 203 aa9.26□□□□□ -0.93
CAPN1-216ENST00000528739 TMEM18Q96B42 140 aa9.26□□□□□ -0.93
CAPN1-216ENST00000528739 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
CAPN1-216ENST00000528739 CCL25O15444 150 aa9.25□□□□□ -0.93
CAPN1-216ENST00000528739 TNFRSF6BO95407 300 aa9.25□□□□□ -0.93
CAPN1-216ENST00000528739 CLLU1Q5K131 121 aa9.25□□□□□ -0.93
CAPN1-216ENST00000528739 ZNF664Q8N3J9 261 aa9.25□□□□□ -0.93
CAPN1-216ENST00000528739 CIRBP-AS1Q8TBR5 109 aa9.25□□□□□ -0.93
CAPN1-216ENST00000528739 ANAPC16Q96DE5 110 aa9.25□□□□□ -0.93
CAPN1-216ENST00000528739 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
CAPN1-216ENST00000528739 CDC42SE2Q9NRR3 84 aa9.24□□□□□ -0.93
CAPN1-216ENST00000528739 IGHV3-64A0A075B6Q5 118 aa9.23□□□□□ -0.93
CAPN1-216ENST00000528739 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
CAPN1-216ENST00000528739 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
CAPN1-216ENST00000528739 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
CAPN1-216ENST00000528739 ATP5L2Q7Z4Y8 100 aa9.23□□□□□ -0.93
CAPN1-216ENST00000528739 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
CAPN1-216ENST00000528739 TCAPO15273 167 aa9.22□□□□□ -0.93
CAPN1-216ENST00000528739 NPYP01303 97 aa9.22□□□□□ -0.93
CAPN1-216ENST00000528739 PPBPP02775 128 aa9.22□□□□□ -0.93
CAPN1-216ENST00000528739 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
CAPN1-216ENST00000528739 ORMDL3Q8N138 153 aa9.22□□□□□ -0.93
CAPN1-216ENST00000528739 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
CAPN1-216ENST00000528739 DNAH8Q96JB1 4490 aa9.22□□□□□ -0.93
CAPN1-216ENST00000528739 FAT1Q14517 4588 aa9.21□□□□□ -0.93
CAPN1-216ENST00000528739 TRBV24-1A0A075B6N3 115 aa9.21□□□□□ -0.94
CAPN1-216ENST00000528739 TRAV13-1A0A0B4J241 112 aa9.21□□□□□ -0.94
CAPN1-216ENST00000528739 RAB5AP20339 215 aa9.21□□□□□ -0.94
CAPN1-216ENST00000528739 MALP21145 153 aa9.21□□□□□ -0.94
CAPN1-216ENST00000528739 FOXI1Q12951 378 aa9.21□□□□□ -0.94
CAPN1-216ENST00000528739 PRELID3AQ96N28 172 aa9.21□□□□□ -0.94
CAPN1-216ENST00000528739 SMIM2Q9BVW6 85 aa9.21□□□□□ -0.94
CAPN1-216ENST00000528739 UBE2D4Q9Y2X8 147 aa9.21□□□□□ -0.94
CAPN1-216ENST00000528739 LOC389332A0A1B0GUA5 103 aa9.2□□□□□ -0.94
CAPN1-216ENST00000528739 SDIM1Q6ZPB5 146 aa9.2□□□□□ -0.94
CAPN1-216ENST00000528739 IGHV1-58A0A0C4DH39 117 aa9.19□□□□□ -0.94
CAPN1-216ENST00000528739 C1orf196B1AJZ1 125 aa9.19□□□□□ -0.94
CAPN1-216ENST00000528739 SLPIP03973 132 aa9.19□□□□□ -0.94
CAPN1-216ENST00000528739 RPL39P62891 51 aaKnown RBP9.19□□□□□ -0.94
CAPN1-216ENST00000528739 CD164L2Q6UWJ8 174 aa9.19□□□□□ -0.94
CAPN1-216ENST00000528739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
CAPN1-216ENST00000528739 ZNF561-AS1K7EIQ3 104 aa9.18□□□□□ -0.94
CAPN1-216ENST00000528739 PHOX2AO14813 284 aa9.18□□□□□ -0.94
CAPN1-216ENST00000528739 RPL32P62910 135 aaKnown RBP9.18□□□□□ -0.94
CAPN1-216ENST00000528739 IFITM2Q01629 132 aa9.18□□□□□ -0.94
CAPN1-216ENST00000528739 UQCC3Q6UW78 93 aa9.18□□□□□ -0.94
CAPN1-216ENST00000528739 Q6ZUT4 128 aa9.18□□□□□ -0.94
CAPN1-216ENST00000528739 LINC00526Q96FQ7 95 aa9.18□□□□□ -0.94
CAPN1-216ENST00000528739 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
CAPN1-216ENST00000528739 TMEM218A2RU14 115 aa9.17□□□□□ -0.94
CAPN1-216ENST00000528739 CHTF8P0CG12 524 aa9.17□□□□□ -0.94
CAPN1-216ENST00000528739 COX6A2Q02221 97 aa9.17□□□□□ -0.94
CAPN1-216ENST00000528739 CTDSP1Q9GZU7 261 aa9.17□□□□□ -0.94
CAPN1-216ENST00000528739 MAP1LC3AQ9H492 121 aa9.17□□□□□ -0.94
CAPN1-216ENST00000528739 GVQW2A0A096LPI5 108 aaPredicted RBP9.16□□□□□ -0.94
CAPN1-216ENST00000528739 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
CAPN1-216ENST00000528739 PANO1I0J062 215 aa9.16□□□□□ -0.94
CAPN1-216ENST00000528739 COX7A2LO14548 114 aa9.16□□□□□ -0.94
CAPN1-216ENST00000528739 TIMM21Q9BVV7 248 aa9.16□□□□□ -0.94
CAPN1-216ENST00000528739 RPL37AP61513 92 aaKnown RBP9.15□□□□□ -0.94
CAPN1-216ENST00000528739 C5orf38Q86SI9 138 aa9.15□□□□□ -0.94
CAPN1-216ENST00000528739 COMMD7Q86VX2 200 aa9.15□□□□□ -0.94
CAPN1-216ENST00000528739 OPRPNQ99935 248 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-216ENST00000528739 SPANXA1Q9NS26 97 aa9.15□□□□□ -0.94
CAPN1-216ENST00000528739 J3QL48 77 aa9.14□□□□□ -0.95
CAPN1-216ENST00000528739 ADCYAP1P18509 176 aa9.14□□□□□ -0.95
CAPN1-216ENST00000528739 IFI27P40305 119 aaPredicted RBP9.14□□□□□ -0.95
CAPN1-216ENST00000528739 MAJINQ3KP22 176 aa9.14□□□□□ -0.95
CAPN1-216ENST00000528739 PRSS3P2Q8NHM4 247 aa9.14□□□□□ -0.95
CAPN1-216ENST00000528739 CARD19Q96LW7 228 aa9.14□□□□□ -0.95
CAPN1-216ENST00000528739 LAMTOR2Q9Y2Q5 125 aa9.14□□□□□ -0.95
CAPN1-216ENST00000528739 IFITM10A6NMD0 228 aa9.13□□□□□ -0.95
CAPN1-216ENST00000528739 APOMO95445 188 aa9.13□□□□□ -0.95
CAPN1-216ENST00000528739 S100PP25815 95 aa9.13□□□□□ -0.95
CAPN1-216ENST00000528739 IMMP2LQ96T52 175 aa9.13□□□□□ -0.95
CAPN1-216ENST00000528739 A0A087WYN8 130 aa9.12□□□□□ -0.95
CAPN1-216ENST00000528739 SYCNQ0VAF6 134 aa9.12□□□□□ -0.95
CAPN1-216ENST00000528739 SEC11CQ9BY50 192 aa9.12□□□□□ -0.95
CAPN1-216ENST00000528739 VPS13BQ7Z7G8 4022 aa9.11□□□□□ -0.95
CAPN1-216ENST00000528739 IGLV4-69A0A075B6H9 119 aa9.11□□□□□ -0.95
CAPN1-216ENST00000528739 KIAA1644Q3SXP7 199 aa9.11□□□□□ -0.95
CAPN1-216ENST00000528739 Q8N8P6 123 aa9.11□□□□□ -0.95
CAPN1-216ENST00000528739 SPACA4Q8TDM5 124 aa9.11□□□□□ -0.95
CAPN1-216ENST00000528739 CAMK2N2Q96S95 79 aa9.11□□□□□ -0.95
CAPN1-216ENST00000528739 PKIGQ9Y2B9 76 aa9.11□□□□□ -0.95
CAPN1-216ENST00000528739 MRPS36P82909 103 aaKnown RBP9.1□□□□□ -0.95
CAPN1-216ENST00000528739 STPG4Q8N801 248 aa9.1□□□□□ -0.95
CAPN1-216ENST00000528739 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
CAPN1-216ENST00000528739 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
CAPN1-216ENST00000528739 ORMDL2Q53FV1 153 aa9.09□□□□□ -0.95
CAPN1-216ENST00000528739 Q6ZN92 141 aa9.09□□□□□ -0.95
CAPN1-216ENST00000528739 A0A096LNI7 61 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms