RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 HAMPP81172 84 aa7.85□□□□□ -1.15
TRAPPC4-209ENST00000528230 SMAGPQ0VAQ4 97 aa7.85□□□□□ -1.15
TRAPPC4-209ENST00000528230 CFAP161Q6P656 301 aa7.85□□□□□ -1.15
TRAPPC4-209ENST00000528230 ATP5L2Q7Z4Y8 100 aa7.85□□□□□ -1.15
TRAPPC4-209ENST00000528230 ANAPC16Q96DE5 110 aa7.85□□□□□ -1.15
TRAPPC4-209ENST00000528230 KIR2DL4Q99706 377 aa7.85□□□□□ -1.15
TRAPPC4-209ENST00000528230 GAGE12HA6NDE8 117 aa7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 TCAPO15273 167 aa7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 PPBPP02775 128 aa7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 MT-ND4LP03901 98 aa7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 FCER1GP30273 86 aa7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 CNBPP62633 177 aaKnown RBP7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 MRPL54Q6P161 138 aaKnown RBP7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 CHCHD10Q8WYQ3 142 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 CHAC1Q9BUX1 264 aa7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 CDC42SE2Q9NRR3 84 aa7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 AP5S1Q9NUS5 200 aa7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 CSDC2Q9Y534 153 aaKnown RBP7.84□□□□□ -1.15
TRAPPC4-209ENST00000528230 IGKV3OR2-268A0A0C4DH90 116 aa7.83□□□□□ -1.16
TRAPPC4-209ENST00000528230 hDV102S1A0JD36 115 aa7.83□□□□□ -1.16
TRAPPC4-209ENST00000528230 PHOX2AO14813 284 aa7.83□□□□□ -1.16
TRAPPC4-209ENST00000528230 INAFM2P0DMQ5 153 aa7.83□□□□□ -1.16
TRAPPC4-209ENST00000528230 SCXQ7RTU7 201 aa7.83□□□□□ -1.16
TRAPPC4-209ENST00000528230 TMEM18Q96B42 140 aa7.83□□□□□ -1.16
TRAPPC4-209ENST00000528230 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC4-209ENST00000528230 LINC00959A0A1B0GUT2 108 aa7.82□□□□□ -1.16
TRAPPC4-209ENST00000528230 TNFRSF6BO95407 300 aa7.82□□□□□ -1.16
TRAPPC4-209ENST00000528230 IFITM2Q01629 132 aa7.82□□□□□ -1.16
TRAPPC4-209ENST00000528230 UQCC3Q6UW78 93 aa7.82□□□□□ -1.16
TRAPPC4-209ENST00000528230 ZNF664Q8N3J9 261 aa7.82□□□□□ -1.16
TRAPPC4-209ENST00000528230 D6R8Y8 96 aa7.81□□□□□ -1.16
TRAPPC4-209ENST00000528230 CCL25O15444 150 aa7.81□□□□□ -1.16
TRAPPC4-209ENST00000528230 PLA2G1BP04054 148 aaKnown RBP7.81□□□□□ -1.16
TRAPPC4-209ENST00000528230 SS18Q15532 418 aa7.81□□□□□ -1.16
TRAPPC4-209ENST00000528230 SDIM1Q6ZPB5 146 aa7.81□□□□□ -1.16
TRAPPC4-209ENST00000528230 CIRBP-AS1Q8TBR5 109 aa7.81□□□□□ -1.16
TRAPPC4-209ENST00000528230 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
TRAPPC4-209ENST00000528230 SLPIP03973 132 aa7.8□□□□□ -1.16
TRAPPC4-209ENST00000528230 FOXI1Q12951 378 aa7.8□□□□□ -1.16
TRAPPC4-209ENST00000528230 ORMDL3Q8N138 153 aa7.8□□□□□ -1.16
TRAPPC4-209ENST00000528230 C15orf56Q8N910 161 aa7.8□□□□□ -1.16
TRAPPC4-209ENST00000528230 SMIM2Q9BVW6 85 aa7.8□□□□□ -1.16
TRAPPC4-209ENST00000528230 UBE2D4Q9Y2X8 147 aa7.8□□□□□ -1.16
TRAPPC4-209ENST00000528230 NPYP01303 97 aa7.79□□□□□ -1.16
TRAPPC4-209ENST00000528230 CD164L2Q6UWJ8 174 aa7.79□□□□□ -1.16
TRAPPC4-209ENST00000528230 TMEM136Q6ZRR5 245 aa7.79□□□□□ -1.16
TRAPPC4-209ENST00000528230 IMMP2LQ96T52 175 aa7.79□□□□□ -1.16
TRAPPC4-209ENST00000528230 ABCA13Q86UQ4 5058 aa7.79□□□□□ -1.16
TRAPPC4-209ENST00000528230 DNAH8Q96JB1 4490 aa7.78□□□□□ -1.16
TRAPPC4-209ENST00000528230 IGHV3-64A0A075B6Q5 118 aa7.78□□□□□ -1.16
TRAPPC4-209ENST00000528230 GVQW2A0A096LPI5 108 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC4-209ENST00000528230 TMEM218A2RU14 115 aa7.78□□□□□ -1.16
TRAPPC4-209ENST00000528230 PRSS47A8MTI9 375 aa7.78□□□□□ -1.16
TRAPPC4-209ENST00000528230 C1orf196B1AJZ1 125 aa7.78□□□□□ -1.16
TRAPPC4-209ENST00000528230 XCL1P47992 114 aa7.78□□□□□ -1.16
TRAPPC4-209ENST00000528230 LAMTOR2Q9Y2Q5 125 aa7.78□□□□□ -1.16
TRAPPC4-209ENST00000528230 IGHV1-58A0A0C4DH39 117 aa7.77□□□□□ -1.17
TRAPPC4-209ENST00000528230 CIRBPQ14011 172 aaKnown RBP7.77□□□□□ -1.17
TRAPPC4-209ENST00000528230 PRELID3AQ96N28 172 aa7.77□□□□□ -1.17
TRAPPC4-209ENST00000528230 CTDSP1Q9GZU7 261 aa7.77□□□□□ -1.17
TRAPPC4-209ENST00000528230 FAT1Q14517 4588 aa7.76□□□□□ -1.17
TRAPPC4-209ENST00000528230 ADCYAP1P18509 176 aa7.76□□□□□ -1.17
TRAPPC4-209ENST00000528230 HIGD2BQ4VC39 106 aa7.76□□□□□ -1.17
TRAPPC4-209ENST00000528230 SEC11CQ9BY50 192 aa7.76□□□□□ -1.17
TRAPPC4-209ENST00000528230 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
TRAPPC4-209ENST00000528230 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC4-209ENST00000528230 RAB5AP20339 215 aa7.75□□□□□ -1.17
TRAPPC4-209ENST00000528230 MRPS36P82909 103 aaKnown RBP7.75□□□□□ -1.17
TRAPPC4-209ENST00000528230 TRAV9-1A0A075B6T8 112 aa7.74□□□□□ -1.17
TRAPPC4-209ENST00000528230 RPL39P62891 51 aaKnown RBP7.74□□□□□ -1.17
TRAPPC4-209ENST00000528230 Q6ZUT4 128 aa7.74□□□□□ -1.17
TRAPPC4-209ENST00000528230 TRAV13-1A0A0B4J241 112 aa7.73□□□□□ -1.17
TRAPPC4-209ENST00000528230 PANO1I0J062 215 aa7.73□□□□□ -1.17
TRAPPC4-209ENST00000528230 COX7A2LO14548 114 aa7.73□□□□□ -1.17
TRAPPC4-209ENST00000528230 RNASE13Q5GAN3 156 aaKnown RBP7.73□□□□□ -1.17
TRAPPC4-209ENST00000528230 FAM104AQ969W3 186 aa7.73□□□□□ -1.17
TRAPPC4-209ENST00000528230 MAP1LC3AQ9H492 121 aa7.73□□□□□ -1.17
TRAPPC4-209ENST00000528230 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
TRAPPC4-209ENST00000528230 PYGO1Q9Y3Y4 419 aa7.73□□□□□ -1.17
TRAPPC4-209ENST00000528230 ZNF561-AS1K7EIQ3 104 aa7.72□□□□□ -1.17
TRAPPC4-209ENST00000528230 K7EMI3 77 aa7.72□□□□□ -1.17
TRAPPC4-209ENST00000528230 MALP21145 153 aa7.72□□□□□ -1.17
TRAPPC4-209ENST00000528230 KRTAP10-4P60372 401 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC4-209ENST00000528230 COX6A2Q02221 97 aa7.72□□□□□ -1.17
TRAPPC4-209ENST00000528230 COMMD7Q86VX2 200 aa7.72□□□□□ -1.17
TRAPPC4-209ENST00000528230 Q8N8P6 123 aa7.72□□□□□ -1.17
TRAPPC4-209ENST00000528230 SPACA4Q8TDM5 124 aa7.72□□□□□ -1.17
TRAPPC4-209ENST00000528230 DPH3Q96FX2 82 aa7.72□□□□□ -1.17
TRAPPC4-209ENST00000528230 SRRM2Q9UQ35 2752 aaKnown RBP7.71□□□□□ -1.17
TRAPPC4-209ENST00000528230 LOC389332A0A1B0GUA5 103 aa7.71□□□□□ -1.18
TRAPPC4-209ENST00000528230 APOMO95445 188 aa7.71□□□□□ -1.18
TRAPPC4-209ENST00000528230 IFI27P40305 119 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC4-209ENST00000528230 C10orf91Q5T1B1 145 aa7.71□□□□□ -1.18
TRAPPC4-209ENST00000528230 A0A087WYN8 130 aa7.7□□□□□ -1.18
TRAPPC4-209ENST00000528230 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
TRAPPC4-209ENST00000528230 ORMDL2Q53FV1 153 aa7.7□□□□□ -1.18
TRAPPC4-209ENST00000528230 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
TRAPPC4-209ENST00000528230 CARD19Q96LW7 228 aa7.7□□□□□ -1.18
TRAPPC4-209ENST00000528230 OPRPNQ99935 248 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC4-209ENST00000528230 NXT2Q9NPJ8 142 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms