RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 F5H697 171 aa9.34□□□□□ -0.91
CAPN1-212ENST00000527887 LECT2O14960 151 aa9.34□□□□□ -0.91
CAPN1-212ENST00000527887 SSTP61278 116 aa9.34□□□□□ -0.91
CAPN1-212ENST00000527887 HIST3H2BBQ8N257 126 aa9.34□□□□□ -0.91
CAPN1-212ENST00000527887 C1orf43Q9BWL3 253 aa9.34□□□□□ -0.91
CAPN1-212ENST00000527887 MYCBP2O75592 4640 aa9.34□□□□□ -0.91
CAPN1-212ENST00000527887 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.33□□□□□ -0.92
CAPN1-212ENST00000527887 H7C1H1 209 aa9.33□□□□□ -0.92
CAPN1-212ENST00000527887 CRPP02741 224 aa9.33□□□□□ -0.92
CAPN1-212ENST00000527887 PMCHP20382 165 aa9.33□□□□□ -0.92
CAPN1-212ENST00000527887 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
CAPN1-212ENST00000527887 C20orf78Q9BR46 151 aa9.33□□□□□ -0.92
CAPN1-212ENST00000527887 K7EMI3 77 aa9.32□□□□□ -0.92
CAPN1-212ENST00000527887 PLA2G1BP04054 148 aaKnown RBP9.32□□□□□ -0.92
CAPN1-212ENST00000527887 S100A2P29034 98 aa9.32□□□□□ -0.92
CAPN1-212ENST00000527887 RPL32P62910 135 aaKnown RBP9.32□□□□□ -0.92
CAPN1-212ENST00000527887 TMEM18Q96B42 140 aa9.32□□□□□ -0.92
CAPN1-212ENST00000527887 CHCHD5Q9BSY4 110 aa9.32□□□□□ -0.92
CAPN1-212ENST00000527887 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
CAPN1-212ENST00000527887 LINC01546A6NGU7 62 aa9.31□□□□□ -0.92
CAPN1-212ENST00000527887 SERF1AO75920 110 aa9.31□□□□□ -0.92
CAPN1-212ENST00000527887 TNFRSF6BO95407 300 aa9.31□□□□□ -0.92
CAPN1-212ENST00000527887 LINC00614P0C842 121 aa9.31□□□□□ -0.92
CAPN1-212ENST00000527887 HAMPP81172 84 aa9.31□□□□□ -0.92
CAPN1-212ENST00000527887 MIAQ16674 131 aa9.31□□□□□ -0.92
CAPN1-212ENST00000527887 ENHOQ6UWT2 76 aa9.31□□□□□ -0.92
CAPN1-212ENST00000527887 TRBV25-1A0A075B6N4 114 aa9.3□□□□□ -0.92
CAPN1-212ENST00000527887 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
CAPN1-212ENST00000527887 ANGP03950 147 aaKnown RBP9.3□□□□□ -0.92
CAPN1-212ENST00000527887 LINC00310P59036 64 aa9.3□□□□□ -0.92
CAPN1-212ENST00000527887 MPV17L2Q567V2 206 aa9.3□□□□□ -0.92
CAPN1-212ENST00000527887 NRACQ8N912 160 aa9.3□□□□□ -0.92
CAPN1-212ENST00000527887 PRSS3P2Q8NHM4 247 aa9.3□□□□□ -0.92
CAPN1-212ENST00000527887 MAP1LC3AQ9H492 121 aa9.3□□□□□ -0.92
CAPN1-212ENST00000527887 M0QY20 66 aa9.29□□□□□ -0.92
CAPN1-212ENST00000527887 IQCJQ1A5X6 159 aa9.29□□□□□ -0.92
CAPN1-212ENST00000527887 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
CAPN1-212ENST00000527887 HIST1H2BLQ99880 126 aa9.29□□□□□ -0.92
CAPN1-212ENST00000527887 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
CAPN1-212ENST00000527887 IGHV1-24A0A0C4DH33 117 aa9.28□□□□□ -0.92
CAPN1-212ENST00000527887 HSBP1O75506 76 aa9.28□□□□□ -0.92
CAPN1-212ENST00000527887 NPYP01303 97 aa9.28□□□□□ -0.92
CAPN1-212ENST00000527887 CHAC1Q9BUX1 264 aa9.28□□□□□ -0.92
CAPN1-212ENST00000527887 AP5S1Q9NUS5 200 aa9.28□□□□□ -0.92
CAPN1-212ENST00000527887 IFITM10A6NMD0 228 aa9.27□□□□□ -0.93
CAPN1-212ENST00000527887 TCAPO15273 167 aa9.27□□□□□ -0.93
CAPN1-212ENST00000527887 MGPP08493 103 aa9.27□□□□□ -0.93
CAPN1-212ENST00000527887 DGAT2L7PQ6IED9 249 aa9.27□□□□□ -0.93
CAPN1-212ENST00000527887 FA2HQ7L5A8 372 aa9.27□□□□□ -0.93
CAPN1-212ENST00000527887 Q8N8P6 123 aa9.27□□□□□ -0.93
CAPN1-212ENST00000527887 URB1-AS1Q96HZ7 61 aa9.27□□□□□ -0.93
CAPN1-212ENST00000527887 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
CAPN1-212ENST00000527887 NUPR1O60356 82 aa9.26□□□□□ -0.93
CAPN1-212ENST00000527887 G0S2P27469 103 aa9.26□□□□□ -0.93
CAPN1-212ENST00000527887 SUMO2P61956 95 aaKnown RBP9.26□□□□□ -0.93
CAPN1-212ENST00000527887 RBX1P62877 108 aa9.26□□□□□ -0.93
CAPN1-212ENST00000527887 SUMO4Q6EEV6 95 aa9.26□□□□□ -0.93
CAPN1-212ENST00000527887 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
CAPN1-212ENST00000527887 NIT2Q9NQR4 276 aa9.26□□□□□ -0.93
CAPN1-212ENST00000527887 A0A1B0GUV1 79 aa9.25□□□□□ -0.93
CAPN1-212ENST00000527887 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
CAPN1-212ENST00000527887 NCR2O95944 276 aa9.25□□□□□ -0.93
CAPN1-212ENST00000527887 FABP4P15090 132 aa9.25□□□□□ -0.93
CAPN1-212ENST00000527887 GAGE6Q13070 117 aa9.25□□□□□ -0.93
CAPN1-212ENST00000527887 RNASEKQ6P5S7 137 aaKnown RBP9.25□□□□□ -0.93
CAPN1-212ENST00000527887 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
CAPN1-212ENST00000527887 DEFB104AQ8WTQ1 72 aa9.25□□□□□ -0.93
CAPN1-212ENST00000527887 ST20Q9HBF5 79 aa9.25□□□□□ -0.93
CAPN1-212ENST00000527887 FLG2Q5D862 2391 aaPredicted RBP9.24□□□□□ -0.93
CAPN1-212ENST00000527887 TRAV8-4A0A0B4J246 113 aa9.24□□□□□ -0.93
CAPN1-212ENST00000527887 TRAV26-2A0A0B4J265 109 aa9.24□□□□□ -0.93
CAPN1-212ENST00000527887 TRBV27A0A0K0K1C4 114 aa9.24□□□□□ -0.93
CAPN1-212ENST00000527887 VCYO14598 125 aa9.24□□□□□ -0.93
CAPN1-212ENST00000527887 IFI27P40305 119 aaPredicted RBP9.24□□□□□ -0.93
CAPN1-212ENST00000527887 POLR2KP53803 58 aaKnown RBP9.24□□□□□ -0.93
CAPN1-212ENST00000527887 LINC00269Q8N2A0 174 aa9.24□□□□□ -0.93
CAPN1-212ENST00000527887 SMIM2Q9BVW6 85 aa9.24□□□□□ -0.93
CAPN1-212ENST00000527887 USP17L23D6RBM5 183 aa9.23□□□□□ -0.93
CAPN1-212ENST00000527887 GAS8-AS1O95177 125 aa9.23□□□□□ -0.93
CAPN1-212ENST00000527887 AMTP48728 403 aa9.23□□□□□ -0.93
CAPN1-212ENST00000527887 LINC01620Q4KN68 170 aa9.23□□□□□ -0.93
CAPN1-212ENST00000527887 TMEM243Q9BU79 118 aa9.23□□□□□ -0.93
CAPN1-212ENST00000527887 LOC389332A0A1B0GUA5 103 aa9.22□□□□□ -0.93
CAPN1-212ENST00000527887 ORMDL2Q53FV1 153 aa9.22□□□□□ -0.93
CAPN1-212ENST00000527887 PDZD11Q5EBL8 140 aa9.22□□□□□ -0.93
CAPN1-212ENST00000527887 OR10D4PQ8NGN7 298 aa9.22□□□□□ -0.93
CAPN1-212ENST00000527887 CIRBP-AS1Q8TBR5 109 aa9.22□□□□□ -0.93
CAPN1-212ENST00000527887 FCER1GP30273 86 aa9.21□□□□□ -0.94
CAPN1-212ENST00000527887 AKR1D1P51857 326 aa9.21□□□□□ -0.94
CAPN1-212ENST00000527887 REG3AQ06141 175 aa9.21□□□□□ -0.94
CAPN1-212ENST00000527887 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
CAPN1-212ENST00000527887 C9orf163Q8N9P6 203 aa9.21□□□□□ -0.94
CAPN1-212ENST00000527887 KIR2DL4Q99706 377 aa9.21□□□□□ -0.94
CAPN1-212ENST00000527887 HSPB8Q9UJY1 196 aa9.21□□□□□ -0.94
CAPN1-212ENST00000527887 KRTAP29-1A8MX34 341 aaPredicted RBP9.2□□□□□ -0.94
CAPN1-212ENST00000527887 J3QL48 77 aa9.2□□□□□ -0.94
CAPN1-212ENST00000527887 HBDP02042 147 aa9.2□□□□□ -0.94
CAPN1-212ENST00000527887 PRSS1P07477 247 aa9.2□□□□□ -0.94
CAPN1-212ENST00000527887 SMIM6P0DI80 62 aa9.2□□□□□ -0.94
CAPN1-212ENST00000527887 COTL1Q14019 142 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms