RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 XCL1P47992 114 aa12.36□□□□□ -0.43
CAPN1-211ENST00000527739 CAMPP49913 170 aa12.36□□□□□ -0.43
CAPN1-211ENST00000527739 RPL37AP61513 92 aaKnown RBP12.36□□□□□ -0.43
CAPN1-211ENST00000527739 C15orf56Q8N910 161 aa12.36□□□□□ -0.43
CAPN1-211ENST00000527739 FAT3Q8TDW7 4589 aa12.35□□□□□ -0.43
CAPN1-211ENST00000527739 TRBV27A0A0K0K1C4 114 aa12.34□□□□□ -0.43
CAPN1-211ENST00000527739 C7orf77A4D0Y5 90 aa12.34□□□□□ -0.43
CAPN1-211ENST00000527739 KRTAP29-1A8MX34 341 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-211ENST00000527739 PPP1R17O96001 155 aa12.34□□□□□ -0.43
CAPN1-211ENST00000527739 LINC00959A0A1B0GUT2 108 aa12.33□□□□□ -0.44
CAPN1-211ENST00000527739 SMIM27A0A1W2PRY6 76 aa12.33□□□□□ -0.44
CAPN1-211ENST00000527739 CCL25O15444 150 aa12.33□□□□□ -0.44
CAPN1-211ENST00000527739 FOXI1Q12951 378 aa12.33□□□□□ -0.44
CAPN1-211ENST00000527739 SS18Q15532 418 aa12.33□□□□□ -0.44
CAPN1-211ENST00000527739 CHTF8P0CG12 524 aa12.32□□□□□ -0.44
CAPN1-211ENST00000527739 KRTAP10-4P60372 401 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-211ENST00000527739 SUMO2P61956 95 aaKnown RBP12.32□□□□□ -0.44
CAPN1-211ENST00000527739 MRPL51Q4U2R6 128 aaKnown RBP12.32□□□□□ -0.44
CAPN1-211ENST00000527739 FAM104BQ5XKR9 115 aa12.32□□□□□ -0.44
CAPN1-211ENST00000527739 KIR2DL4Q99706 377 aa12.32□□□□□ -0.44
CAPN1-211ENST00000527739 SMDT1Q9H4I9 107 aa12.32□□□□□ -0.44
CAPN1-211ENST00000527739 CKS2P33552 79 aa12.31□□□□□ -0.44
CAPN1-211ENST00000527739 ZNF664Q8N3J9 261 aa12.31□□□□□ -0.44
CAPN1-211ENST00000527739 NRACQ8N912 160 aa12.31□□□□□ -0.44
CAPN1-211ENST00000527739 CDC42SE2Q9NRR3 84 aa12.31□□□□□ -0.44
CAPN1-211ENST00000527739 COX6A2Q02221 97 aa12.3□□□□□ -0.44
CAPN1-211ENST00000527739 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
CAPN1-211ENST00000527739 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
CAPN1-211ENST00000527739 UBR4Q5T4S7 5183 aa12.29□□□□□ -0.44
CAPN1-211ENST00000527739 A0A1B0GW15 77 aa12.29□□□□□ -0.44
CAPN1-211ENST00000527739 PPP1R2P9O14990 202 aa12.29□□□□□ -0.44
CAPN1-211ENST00000527739 A0A087WYN8 130 aa12.28□□□□□ -0.44
CAPN1-211ENST00000527739 GVQW2A0A096LPI5 108 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-211ENST00000527739 SMAGPQ0VAQ4 97 aa12.28□□□□□ -0.44
CAPN1-211ENST00000527739 IGHV1-58A0A0C4DH39 117 aa12.27□□□□□ -0.45
CAPN1-211ENST00000527739 IGKV2-24A0A0C4DH68 120 aa12.27□□□□□ -0.45
CAPN1-211ENST00000527739 LINC00862A6NCI5 91 aa12.27□□□□□ -0.45
CAPN1-211ENST00000527739 S100A8P05109 93 aa12.27□□□□□ -0.45
CAPN1-211ENST00000527739 CIRBPQ14011 172 aaKnown RBP12.27□□□□□ -0.45
CAPN1-211ENST00000527739 MAJINQ3KP22 176 aa12.27□□□□□ -0.45
CAPN1-211ENST00000527739 RNASE13Q5GAN3 156 aaKnown RBP12.27□□□□□ -0.45
CAPN1-211ENST00000527739 PRSS3P2Q8NHM4 247 aa12.27□□□□□ -0.45
CAPN1-211ENST00000527739 SPACA4Q8TDM5 124 aa12.27□□□□□ -0.45
CAPN1-211ENST00000527739 LINC00526Q96FQ7 95 aa12.27□□□□□ -0.45
CAPN1-211ENST00000527739 F8W036 122 aa12.26□□□□□ -0.45
CAPN1-211ENST00000527739 HBBP68871 147 aa12.26□□□□□ -0.45
CAPN1-211ENST00000527739 CD164L2Q6UWJ8 174 aa12.26□□□□□ -0.45
CAPN1-211ENST00000527739 TMEM18Q96B42 140 aa12.26□□□□□ -0.45
CAPN1-211ENST00000527739 C20orf78Q9BR46 151 aa12.26□□□□□ -0.45
CAPN1-211ENST00000527739 TNFRSF6BO95407 300 aa12.25□□□□□ -0.45
CAPN1-211ENST00000527739 MALP21145 153 aa12.25□□□□□ -0.45
CAPN1-211ENST00000527739 UBE2D4Q9Y2X8 147 aa12.25□□□□□ -0.45
CAPN1-211ENST00000527739 TRAV13-1A0A0B4J241 112 aa12.24□□□□□ -0.45
CAPN1-211ENST00000527739 C1orf196B1AJZ1 125 aa12.24□□□□□ -0.45
CAPN1-211ENST00000527739 D6R8Y8 96 aa12.24□□□□□ -0.45
CAPN1-211ENST00000527739 ZNF561-AS1K7EIQ3 104 aa12.24□□□□□ -0.45
CAPN1-211ENST00000527739 PKHD1L1Q86WI1 4243 aa12.23□□□□□ -0.45
CAPN1-211ENST00000527739 RAB14P61106 215 aa12.23□□□□□ -0.45
CAPN1-211ENST00000527739 TRBV24-1A0A075B6N3 115 aa12.22□□□□□ -0.45
CAPN1-211ENST00000527739 OXTP01178 125 aa12.22□□□□□ -0.45
CAPN1-211ENST00000527739 HNRNPA3P51991 378 aaKnown RBP12.22□□□□□ -0.45
CAPN1-211ENST00000527739 CSDC2Q9Y534 153 aaKnown RBP12.22□□□□□ -0.45
CAPN1-211ENST00000527739 COX7A2LO14548 114 aa12.21□□□□□ -0.45
CAPN1-211ENST00000527739 Q6ZUT4 128 aa12.21□□□□□ -0.45
CAPN1-211ENST00000527739 STPG4Q8N801 248 aa12.21□□□□□ -0.45
CAPN1-211ENST00000527739 C7orf33Q8WU49 177 aa12.21□□□□□ -0.45
CAPN1-211ENST00000527739 CARD19Q96LW7 228 aa12.21□□□□□ -0.45
CAPN1-211ENST00000527739 SMIM2Q9BVW6 85 aa12.21□□□□□ -0.45
CAPN1-211ENST00000527739 PLAC8Q9NZF1 115 aa12.21□□□□□ -0.45
CAPN1-211ENST00000527739 A0A1B0GXF2 115 aa12.2□□□□□ -0.46
CAPN1-211ENST00000527739 TCAPO15273 167 aa12.2□□□□□ -0.46
CAPN1-211ENST00000527739 NPYP01303 97 aa12.2□□□□□ -0.46
CAPN1-211ENST00000527739 SYCNQ0VAF6 134 aa12.2□□□□□ -0.46
CAPN1-211ENST00000527739 A0A096LNI7 61 aa12.19□□□□□ -0.46
CAPN1-211ENST00000527739 RPL39P62891 51 aaKnown RBP12.19□□□□□ -0.46
CAPN1-211ENST00000527739 RPL32P62910 135 aaKnown RBP12.19□□□□□ -0.46
CAPN1-211ENST00000527739 C5orf38Q86SI9 138 aa12.19□□□□□ -0.46
CAPN1-211ENST00000527739 TIMM21Q9BVV7 248 aa12.19□□□□□ -0.46
CAPN1-211ENST00000527739 PPBPP02775 128 aa12.18□□□□□ -0.46
CAPN1-211ENST00000527739 SERTAD4-AS1Q5TG53 156 aa12.18□□□□□ -0.46
CAPN1-211ENST00000527739 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
CAPN1-211ENST00000527739 PKIGQ9Y2B9 76 aa12.18□□□□□ -0.46
CAPN1-211ENST00000527739 IGLV4-69A0A075B6H9 119 aa12.17□□□□□ -0.46
CAPN1-211ENST00000527739 PHOX2AO14813 284 aa12.17□□□□□ -0.46
CAPN1-211ENST00000527739 RAB5AP20339 215 aa12.17□□□□□ -0.46
CAPN1-211ENST00000527739 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
CAPN1-211ENST00000527739 ORMDL3Q8N138 153 aa12.17□□□□□ -0.46
CAPN1-211ENST00000527739 PRELID3AQ96N28 172 aa12.17□□□□□ -0.46
CAPN1-211ENST00000527739 MT-ND4LP03901 98 aa12.16□□□□□ -0.46
CAPN1-211ENST00000527739 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-211ENST00000527739 LINC00474Q9P2X8 69 aa12.16□□□□□ -0.46
CAPN1-211ENST00000527739 CAMK2N2Q96S95 79 aa12.15□□□□□ -0.46
CAPN1-211ENST00000527739 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
CAPN1-211ENST00000527739 APOMO95445 188 aa12.14□□□□□ -0.47
CAPN1-211ENST00000527739 PNRC1Q12796 327 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-211ENST00000527739 GAGE2BQ13066 116 aa12.14□□□□□ -0.47
CAPN1-211ENST00000527739 LOC389332A0A1B0GUA5 103 aa12.13□□□□□ -0.47
CAPN1-211ENST00000527739 Q6ZRU5 148 aa12.13□□□□□ -0.47
CAPN1-211ENST00000527739 ANAPC16Q96DE5 110 aa12.13□□□□□ -0.47
CAPN1-211ENST00000527739 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms