RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TSHBP01222 138 aa14.07□□□□□ -0.16
TRAPPC4-208ENST00000527680 ESDP10768 282 aa14.07□□□□□ -0.16
TRAPPC4-208ENST00000527680 LINC00474Q9P2X8 69 aa14.07□□□□□ -0.16
TRAPPC4-208ENST00000527680 HIGD1CA8MV81 97 aa14.06□□□□□ -0.16
TRAPPC4-208ENST00000527680 ZNF561-AS1K7EIQ3 104 aa14.06□□□□□ -0.16
TRAPPC4-208ENST00000527680 SMIM7Q9BQ49 75 aa14.06□□□□□ -0.16
TRAPPC4-208ENST00000527680 PKIGQ9Y2B9 76 aa14.06□□□□□ -0.16
TRAPPC4-208ENST00000527680 TSKUQ8WUA8 353 aa14.05□□□□□ -0.16
TRAPPC4-208ENST00000527680 FAM210AQ96ND0 272 aa14.05□□□□□ -0.16
TRAPPC4-208ENST00000527680 TMEM191AQ9H0A3 160 aa14.05□□□□□ -0.16
TRAPPC4-208ENST00000527680 UBR4Q5T4S7 5183 aa14.05□□□□□ -0.16
TRAPPC4-208ENST00000527680 AKAP14Q86UN6 197 aa14.04□□□□□ -0.16
TRAPPC4-208ENST00000527680 ZNF664Q8N3J9 261 aa14.04□□□□□ -0.16
TRAPPC4-208ENST00000527680 CARD19Q96LW7 228 aa14.04□□□□□ -0.16
TRAPPC4-208ENST00000527680 CDC42SE2Q9NRR3 84 aa14.04□□□□□ -0.16
TRAPPC4-208ENST00000527680 RAB4AP20338 218 aa14.03□□□□□ -0.16
TRAPPC4-208ENST00000527680 POLR2KP53803 58 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-208ENST00000527680 PRR3P79522 188 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-208ENST00000527680 CD164L2Q6UWJ8 174 aa14.03□□□□□ -0.16
TRAPPC4-208ENST00000527680 C7orf77A4D0Y5 90 aa14.02□□□□□ -0.17
TRAPPC4-208ENST00000527680 ZNF727A8MUV8 499 aa14.02□□□□□ -0.17
TRAPPC4-208ENST00000527680 FCER1GP30273 86 aa14.02□□□□□ -0.17
TRAPPC4-208ENST00000527680 SYCNQ0VAF6 134 aa14.02□□□□□ -0.17
TRAPPC4-208ENST00000527680 LINC01551Q86U37 167 aa14.02□□□□□ -0.17
TRAPPC4-208ENST00000527680 AMN1Q8IY45 258 aa14.02□□□□□ -0.17
TRAPPC4-208ENST00000527680 TRBV27A0A0K0K1C4 114 aa14.01□□□□□ -0.17
TRAPPC4-208ENST00000527680 VCYO14598 125 aa14.01□□□□□ -0.17
TRAPPC4-208ENST00000527680 MALP21145 153 aa14.01□□□□□ -0.17
TRAPPC4-208ENST00000527680 MRPL52Q86TS9 123 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-208ENST00000527680 RIGQ13278 110 aa14□□□□□ -0.17
TRAPPC4-208ENST00000527680 OSTCQ9NRP0 149 aa14□□□□□ -0.17
TRAPPC4-208ENST00000527680 hCG_2014768A0A024R1R8 64 aa13.99□□□□□ -0.17
TRAPPC4-208ENST00000527680 SMKR1H3BMG3 65 aa13.99□□□□□ -0.17
TRAPPC4-208ENST00000527680 LINC01600Q96MT4 127 aa13.99□□□□□ -0.17
TRAPPC4-208ENST00000527680 C1orf196B1AJZ1 125 aa13.98□□□□□ -0.17
TRAPPC4-208ENST00000527680 SMAGPQ0VAQ4 97 aa13.98□□□□□ -0.17
TRAPPC4-208ENST00000527680 ISOC2Q96AB3 205 aa13.98□□□□□ -0.17
TRAPPC4-208ENST00000527680 PPP1R17O96001 155 aa13.97□□□□□ -0.17
TRAPPC4-208ENST00000527680 CAMPP49913 170 aa13.97□□□□□ -0.17
TRAPPC4-208ENST00000527680 GAGE2BQ13066 116 aa13.97□□□□□ -0.17
TRAPPC4-208ENST00000527680 COX7A2LO14548 114 aa13.96□□□□□ -0.17
TRAPPC4-208ENST00000527680 KIR2DL4Q99706 377 aa13.96□□□□□ -0.17
TRAPPC4-208ENST00000527680 IGLV4-69A0A075B6H9 119 aa13.95□□□□□ -0.18
TRAPPC4-208ENST00000527680 SRP19P09132 144 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-208ENST00000527680 RNASE13Q5GAN3 156 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-208ENST00000527680 SPINK6Q6UWN8 80 aa13.95□□□□□ -0.18
TRAPPC4-208ENST00000527680 NUP35Q8NFH5 326 aa13.95□□□□□ -0.18
TRAPPC4-208ENST00000527680 TRAV13-1A0A0B4J241 112 aa13.94□□□□□ -0.18
TRAPPC4-208ENST00000527680 LOC107984640A0A0U1RRK4 108 aa13.94□□□□□ -0.18
TRAPPC4-208ENST00000527680 SUMO2P61956 95 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-208ENST00000527680 REG3GQ6UW15 175 aa13.94□□□□□ -0.18
TRAPPC4-208ENST00000527680 Q6ZRP5 223 aa13.94□□□□□ -0.18
TRAPPC4-208ENST00000527680 V9GYV3 84 aa13.94□□□□□ -0.18
TRAPPC4-208ENST00000527680 TMEM241Q24JQ0 296 aa13.93□□□□□ -0.18
TRAPPC4-208ENST00000527680 CAMK2N2Q96S95 79 aa13.93□□□□□ -0.18
TRAPPC4-208ENST00000527680 PTTG1IPP53801 180 aa13.92□□□□□ -0.18
TRAPPC4-208ENST00000527680 TMEM18Q96B42 140 aa13.92□□□□□ -0.18
TRAPPC4-208ENST00000527680 NAT8BQ9UHF3 227 aa13.92□□□□□ -0.18
TRAPPC4-208ENST00000527680 UBE2D4Q9Y2X8 147 aa13.92□□□□□ -0.18
TRAPPC4-208ENST00000527680 CSDC2Q9Y534 153 aaKnown RBP13.92□□□□□ -0.18
TRAPPC4-208ENST00000527680 PPP1R2P9O14990 202 aa13.91□□□□□ -0.18
TRAPPC4-208ENST00000527680 C5orf38Q86SI9 138 aa13.91□□□□□ -0.18
TRAPPC4-208ENST00000527680 NRACQ8N912 160 aa13.91□□□□□ -0.18
TRAPPC4-208ENST00000527680 A0A0J9YXV3 536 aa13.9□□□□□ -0.18
TRAPPC4-208ENST00000527680 APOMO95445 188 aa13.89□□□□□ -0.19
TRAPPC4-208ENST00000527680 ODF1Q14990 250 aa13.88□□□□□ -0.19
TRAPPC4-208ENST00000527680 ADIRFQ15847 76 aa13.88□□□□□ -0.19
TRAPPC4-208ENST00000527680 MRPL51Q4U2R6 128 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-208ENST00000527680 FAM74A3Q4VXF1 159 aa13.88□□□□□ -0.19
TRAPPC4-208ENST00000527680 FAM104BQ5XKR9 115 aa13.88□□□□□ -0.19
TRAPPC4-208ENST00000527680 CKS2P33552 79 aa13.87□□□□□ -0.19
TRAPPC4-208ENST00000527680 RPL23P62829 140 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-208ENST00000527680 SRSF9Q13242 221 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAPPC4-208ENST00000527680 TNXBP22105 4242 aa13.86□□□□□ -0.19
TRAPPC4-208ENST00000527680 A0A1W2PNN7 141 aa13.86□□□□□ -0.19
TRAPPC4-208ENST00000527680 RPL18AQ02543 176 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-208ENST00000527680 Q6ZUT4 128 aa13.86□□□□□ -0.19
TRAPPC4-208ENST00000527680 C2orf48Q96LS8 159 aa13.86□□□□□ -0.19
TRAPPC4-208ENST00000527680 LINC00862A6NCI5 91 aa13.85□□□□□ -0.19
TRAPPC4-208ENST00000527680 KRTAP10-8P60410 259 aa13.85□□□□□ -0.19
TRAPPC4-208ENST00000527680 OPRPNQ99935 248 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC4-208ENST00000527680 C20orf78Q9BR46 151 aa13.85□□□□□ -0.19
TRAPPC4-208ENST00000527680 TIMM21Q9BVV7 248 aa13.85□□□□□ -0.19
TRAPPC4-208ENST00000527680 NAT8Q9UHE5 227 aa13.84□□□□□ -0.19
TRAPPC4-208ENST00000527680 MT-ND6P03923 174 aa13.83□□□□□ -0.2
TRAPPC4-208ENST00000527680 SPAG11BQ08648 103 aa13.83□□□□□ -0.2
TRAPPC4-208ENST00000527680 C9orf116Q5BN46 136 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC4-208ENST00000527680 SMIM27A0A1W2PRY6 76 aa13.82□□□□□ -0.2
TRAPPC4-208ENST00000527680 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-208ENST00000527680 TCAPO15273 167 aa13.82□□□□□ -0.2
TRAPPC4-208ENST00000527680 RPL39P62891 51 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-208ENST00000527680 TRBV24-1A0A075B6N3 115 aa13.81□□□□□ -0.2
TRAPPC4-208ENST00000527680 A0A1B0GW15 77 aa13.81□□□□□ -0.2
TRAPPC4-208ENST00000527680 TNFRSF6BO95407 300 aa13.81□□□□□ -0.2
TRAPPC4-208ENST00000527680 PEA15Q15121 130 aa13.79□□□□□ -0.2
TRAPPC4-208ENST00000527680 OR10D4PQ8NGN7 298 aa13.79□□□□□ -0.2
TRAPPC4-208ENST00000527680 ORAOV1Q8WV07 137 aa13.79□□□□□ -0.2
TRAPPC4-208ENST00000527680 PSORS1C2Q9UIG4 136 aa13.79□□□□□ -0.2
TRAPPC4-208ENST00000527680 C9JQL5 133 aa13.78□□□□□ -0.2
TRAPPC4-208ENST00000527680 D6R8Y8 96 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms