RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CHCHD10Q8WYQ3 142 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-217ENST00000527644 hDV102S1A0JD36 115 aa17.07■□□□□ 0.32
TSPAN4-217ENST00000527644 RPL32P62910 135 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-217ENST00000527644 IFITM2Q01629 132 aa17.07■□□□□ 0.32
TSPAN4-217ENST00000527644 C9orf163Q8N9P6 203 aa17.07■□□□□ 0.32
TSPAN4-217ENST00000527644 CFAP161Q6P656 301 aa17.06■□□□□ 0.32
TSPAN4-217ENST00000527644 CHAC1Q9BUX1 264 aa17.06■□□□□ 0.32
TSPAN4-217ENST00000527644 CDC42SE2Q9NRR3 84 aa17.06■□□□□ 0.32
TSPAN4-217ENST00000527644 VPS13BQ7Z7G8 4022 aa17.05■□□□□ 0.32
TSPAN4-217ENST00000527644 D6R8Y8 96 aa17.05■□□□□ 0.32
TSPAN4-217ENST00000527644 TNFRSF6BO95407 300 aa17.05■□□□□ 0.32
TSPAN4-217ENST00000527644 PPBPP02775 128 aa17.05■□□□□ 0.32
TSPAN4-217ENST00000527644 CNBPP62633 177 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-217ENST00000527644 SCXQ7RTU7 201 aa17.05■□□□□ 0.32
TSPAN4-217ENST00000527644 AP5S1Q9NUS5 200 aa17.05■□□□□ 0.32
TSPAN4-217ENST00000527644 SMAGPQ0VAQ4 97 aa17.04■□□□□ 0.32
TSPAN4-217ENST00000527644 UQCC3Q6UW78 93 aa17.04■□□□□ 0.32
TSPAN4-217ENST00000527644 TCAPO15273 167 aa17.03■□□□□ 0.32
TSPAN4-217ENST00000527644 INAFM2P0DMQ5 153 aa17.03■□□□□ 0.32
TSPAN4-217ENST00000527644 ZNF664Q8N3J9 261 aa17.03■□□□□ 0.32
TSPAN4-217ENST00000527644 CSDC2Q9Y534 153 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-217ENST00000527644 LINC00959A0A1B0GUT2 108 aa17.02■□□□□ 0.32
TSPAN4-217ENST00000527644 PHOX2AO14813 284 aa17.02■□□□□ 0.32
TSPAN4-217ENST00000527644 C15orf56Q8N910 161 aa17.01■□□□□ 0.31
TSPAN4-217ENST00000527644 TMEM18Q96B42 140 aa17.01■□□□□ 0.31
TSPAN4-217ENST00000527644 SRRM2Q9UQ35 2752 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-217ENST00000527644 TRAV16A0A0A6YYK6 109 aaPredicted RBP17■□□□□ 0.31
TSPAN4-217ENST00000527644 FOXI1Q12951 378 aa17■□□□□ 0.31
TSPAN4-217ENST00000527644 ORMDL3Q8N138 153 aa17■□□□□ 0.31
TSPAN4-217ENST00000527644 CIRBP-AS1Q8TBR5 109 aa17■□□□□ 0.31
TSPAN4-217ENST00000527644 SMIM2Q9BVW6 85 aa17■□□□□ 0.31
TSPAN4-217ENST00000527644 UBE2D4Q9Y2X8 147 aa17■□□□□ 0.31
TSPAN4-217ENST00000527644 NPYP01303 97 aa16.99■□□□□ 0.31
TSPAN4-217ENST00000527644 XCL1P47992 114 aa16.99■□□□□ 0.31
TSPAN4-217ENST00000527644 SS18Q15532 418 aa16.99■□□□□ 0.31
TSPAN4-217ENST00000527644 TMEM136Q6ZRR5 245 aa16.99■□□□□ 0.31
TSPAN4-217ENST00000527644 CCL25O15444 150 aa16.98■□□□□ 0.31
TSPAN4-217ENST00000527644 SLPIP03973 132 aa16.98■□□□□ 0.31
TSPAN4-217ENST00000527644 SDIM1Q6ZPB5 146 aa16.98■□□□□ 0.31
TSPAN4-217ENST00000527644 LINC00528Q8N1L1 170 aa16.98■□□□□ 0.31
TSPAN4-217ENST00000527644 TMEM218A2RU14 115 aa16.97■□□□□ 0.31
TSPAN4-217ENST00000527644 TIMM21Q9BVV7 248 aa16.97■□□□□ 0.31
TSPAN4-217ENST00000527644 PLA2G1BP04054 148 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-217ENST00000527644 PRELID3AQ96N28 172 aa16.96■□□□□ 0.31
TSPAN4-217ENST00000527644 ADCYAP1P18509 176 aa16.95■□□□□ 0.3
TSPAN4-217ENST00000527644 IGHV3-64A0A075B6Q5 118 aa16.94■□□□□ 0.3
TSPAN4-217ENST00000527644 GVQW2A0A096LPI5 108 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-217ENST00000527644 HIGD2BQ4VC39 106 aa16.94■□□□□ 0.3
TSPAN4-217ENST00000527644 CD164L2Q6UWJ8 174 aa16.94■□□□□ 0.3
TSPAN4-217ENST00000527644 IMMP2LQ96T52 175 aa16.94■□□□□ 0.3
TSPAN4-217ENST00000527644 C1orf196B1AJZ1 125 aa16.93■□□□□ 0.3
TSPAN4-217ENST00000527644 LAMTOR2Q9Y2Q5 125 aa16.92■□□□□ 0.3
TSPAN4-217ENST00000527644 IGHV1-58A0A0C4DH39 117 aa16.91■□□□□ 0.3
TSPAN4-217ENST00000527644 RPL39P62891 51 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-217ENST00000527644 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-217ENST00000527644 PRSS47A8MTI9 375 aa16.9■□□□□ 0.3
TSPAN4-217ENST00000527644 RAB5AP20339 215 aa16.9■□□□□ 0.3
TSPAN4-217ENST00000527644 RNASE13Q5GAN3 156 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-217ENST00000527644 SEC11CQ9BY50 192 aa16.9■□□□□ 0.3
TSPAN4-217ENST00000527644 CTDSP1Q9GZU7 261 aa16.9■□□□□ 0.3
TSPAN4-217ENST00000527644 Q6ZUT4 128 aa16.89■□□□□ 0.29
TSPAN4-217ENST00000527644 SPANXA1Q9NS26 97 aa16.89■□□□□ 0.29
TSPAN4-217ENST00000527644 COMMD7Q86VX2 200 aa16.88■□□□□ 0.29
TSPAN4-217ENST00000527644 TRAV13-1A0A0B4J241 112 aa16.87■□□□□ 0.29
TSPAN4-217ENST00000527644 PANO1I0J062 215 aa16.87■□□□□ 0.29
TSPAN4-217ENST00000527644 CIRBPQ14011 172 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-217ENST00000527644 MAP1LC3AQ9H492 121 aa16.87■□□□□ 0.29
TSPAN4-217ENST00000527644 MRPS36P82909 103 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-217ENST00000527644 FLG2Q5D862 2391 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-217ENST00000527644 LOC389332A0A1B0GUA5 103 aa16.84■□□□□ 0.29
TSPAN4-217ENST00000527644 COX7A2LO14548 114 aa16.84■□□□□ 0.29
TSPAN4-217ENST00000527644 FAM104AQ969W3 186 aa16.84■□□□□ 0.29
TSPAN4-217ENST00000527644 TRAV9-1A0A075B6T8 112 aa16.83■□□□□ 0.28
TSPAN4-217ENST00000527644 ZNF561-AS1K7EIQ3 104 aa16.82■□□□□ 0.28
TSPAN4-217ENST00000527644 MALP21145 153 aa16.82■□□□□ 0.28
TSPAN4-217ENST00000527644 Q8N8P6 123 aa16.82■□□□□ 0.28
TSPAN4-217ENST00000527644 DPH3Q96FX2 82 aa16.82■□□□□ 0.28
TSPAN4-217ENST00000527644 COX6A2Q02221 97 aa16.81■□□□□ 0.28
TSPAN4-217ENST00000527644 OPRPNQ99935 248 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-217ENST00000527644 IFI27P40305 119 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-217ENST00000527644 SPACA4Q8TDM5 124 aa16.8■□□□□ 0.28
TSPAN4-217ENST00000527644 LINC00526Q96FQ7 95 aa16.8■□□□□ 0.28
TSPAN4-217ENST00000527644 PYGO1Q9Y3Y4 419 aa16.8■□□□□ 0.28
TSPAN4-217ENST00000527644 MYCBP2O75592 4640 aa16.8■□□□□ 0.28
TSPAN4-217ENST00000527644 CHTF8P0CG12 524 aa16.79■□□□□ 0.28
TSPAN4-217ENST00000527644 C10orf91Q5T1B1 145 aa16.79■□□□□ 0.28
TSPAN4-217ENST00000527644 S100PP25815 95 aa16.78■□□□□ 0.28
TSPAN4-217ENST00000527644 KRTAP10-4P60372 401 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-217ENST00000527644 PRSS3P2Q8NHM4 247 aa16.78■□□□□ 0.28
TSPAN4-217ENST00000527644 K7EMI3 77 aa16.77■□□□□ 0.28
TSPAN4-217ENST00000527644 C5orf38Q86SI9 138 aa16.77■□□□□ 0.28
TSPAN4-217ENST00000527644 CARD19Q96LW7 228 aa16.77■□□□□ 0.28
TSPAN4-217ENST00000527644 PKIGQ9Y2B9 76 aa16.77■□□□□ 0.28
TSPAN4-217ENST00000527644 A0A087WYN8 130 aa16.76■□□□□ 0.27
TSPAN4-217ENST00000527644 IFITM10A6NMD0 228 aa16.76■□□□□ 0.27
TSPAN4-217ENST00000527644 APOMO95445 188 aa16.76■□□□□ 0.27
TSPAN4-217ENST00000527644 SYCNQ0VAF6 134 aa16.76■□□□□ 0.27
TSPAN4-217ENST00000527644 ORMDL2Q53FV1 153 aa16.76■□□□□ 0.27
TSPAN4-217ENST00000527644 DMBT1Q9UGM3 2413 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-217ENST00000527644 NXT2Q9NPJ8 142 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms