RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 TMEM218A2RU14 115 aa10.98□□□□□ -0.65
NR1H3-229ENST00000527464 D6R8Y8 96 aa10.98□□□□□ -0.65
NR1H3-229ENST00000527464 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
NR1H3-229ENST00000527464 IGKV3OR2-268A0A0C4DH90 116 aa10.97□□□□□ -0.65
NR1H3-229ENST00000527464 GAGE12HA6NDE8 117 aa10.97□□□□□ -0.65
NR1H3-229ENST00000527464 CFAP161Q6P656 301 aa10.97□□□□□ -0.65
NR1H3-229ENST00000527464 ORMDL3Q8N138 153 aa10.97□□□□□ -0.65
NR1H3-229ENST00000527464 CHCHD10Q8WYQ3 142 aaPredicted RBP10.97□□□□□ -0.65
NR1H3-229ENST00000527464 TMEM18Q96B42 140 aa10.97□□□□□ -0.65
NR1H3-229ENST00000527464 IMMP2LQ96T52 175 aa10.97□□□□□ -0.65
NR1H3-229ENST00000527464 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
NR1H3-229ENST00000527464 FAT1Q14517 4588 aa10.97□□□□□ -0.65
NR1H3-229ENST00000527464 LINC01620Q4KN68 170 aa10.96□□□□□ -0.65
NR1H3-229ENST00000527464 SMIM2Q9BVW6 85 aa10.96□□□□□ -0.65
NR1H3-229ENST00000527464 NPYP01303 97 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 ADCYAP1P18509 176 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 CNBPP62633 177 aaKnown RBP10.95□□□□□ -0.66
NR1H3-229ENST00000527464 TMEM136Q6ZRR5 245 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 ZNF664Q8N3J9 261 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 C9orf163Q8N9P6 203 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 SEC11CQ9BY50 192 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 CTDSP1Q9GZU7 261 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 AP5S1Q9NUS5 200 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 LAMTOR2Q9Y2Q5 125 aa10.95□□□□□ -0.66
NR1H3-229ENST00000527464 LINC00959A0A1B0GUT2 108 aa10.94□□□□□ -0.66
NR1H3-229ENST00000527464 hDV102S1A0JD36 115 aa10.94□□□□□ -0.66
NR1H3-229ENST00000527464 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
NR1H3-229ENST00000527464 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
NR1H3-229ENST00000527464 UBE2D4Q9Y2X8 147 aa10.94□□□□□ -0.66
NR1H3-229ENST00000527464 VPS13BQ7Z7G8 4022 aa10.93□□□□□ -0.66
NR1H3-229ENST00000527464 CCL25O15444 150 aa10.93□□□□□ -0.66
NR1H3-229ENST00000527464 SS18Q15532 418 aa10.93□□□□□ -0.66
NR1H3-229ENST00000527464 Q5VSD8 79 aa10.93□□□□□ -0.66
NR1H3-229ENST00000527464 COMMD7Q86VX2 200 aa10.93□□□□□ -0.66
NR1H3-229ENST00000527464 SRRM2Q9UQ35 2752 aaKnown RBP10.93□□□□□ -0.66
NR1H3-229ENST00000527464 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.92□□□□□ -0.66
NR1H3-229ENST00000527464 PRSS47A8MTI9 375 aa10.92□□□□□ -0.66
NR1H3-229ENST00000527464 SMR3BP02814 79 aaPredicted RBP10.92□□□□□ -0.66
NR1H3-229ENST00000527464 HAMPP81172 84 aa10.92□□□□□ -0.66
NR1H3-229ENST00000527464 CHAC1Q9BUX1 264 aa10.92□□□□□ -0.66
NR1H3-229ENST00000527464 TRAV9-1A0A075B6T8 112 aa10.91□□□□□ -0.66
NR1H3-229ENST00000527464 FOXI1Q12951 378 aa10.91□□□□□ -0.66
NR1H3-229ENST00000527464 C15orf56Q8N910 161 aa10.91□□□□□ -0.66
NR1H3-229ENST00000527464 C1orf196B1AJZ1 125 aa10.9□□□□□ -0.66
NR1H3-229ENST00000527464 RAB5AP20339 215 aa10.9□□□□□ -0.66
NR1H3-229ENST00000527464 XCL1P47992 114 aa10.9□□□□□ -0.66
NR1H3-229ENST00000527464 CD164L2Q6UWJ8 174 aa10.9□□□□□ -0.66
NR1H3-229ENST00000527464 SCXQ7RTU7 201 aa10.9□□□□□ -0.66
NR1H3-229ENST00000527464 SPANXA1Q9NS26 97 aa10.89□□□□□ -0.67
NR1H3-229ENST00000527464 GVQW2A0A096LPI5 108 aaPredicted RBP10.88□□□□□ -0.67
NR1H3-229ENST00000527464 C10orf91Q5T1B1 145 aa10.88□□□□□ -0.67
NR1H3-229ENST00000527464 SDIM1Q6ZPB5 146 aa10.88□□□□□ -0.67
NR1H3-229ENST00000527464 MAP1LC3AQ9H492 121 aa10.88□□□□□ -0.67
NR1H3-229ENST00000527464 IGHV3-64A0A075B6Q5 118 aa10.87□□□□□ -0.67
NR1H3-229ENST00000527464 IGHV1-58A0A0C4DH39 117 aa10.87□□□□□ -0.67
NR1H3-229ENST00000527464 SLPIP03973 132 aa10.87□□□□□ -0.67
NR1H3-229ENST00000527464 MRPS36P82909 103 aaKnown RBP10.87□□□□□ -0.67
NR1H3-229ENST00000527464 S100PP25815 95 aa10.86□□□□□ -0.67
NR1H3-229ENST00000527464 RPL39P62891 51 aaKnown RBP10.86□□□□□ -0.67
NR1H3-229ENST00000527464 Q6ZUT4 128 aa10.86□□□□□ -0.67
NR1H3-229ENST00000527464 CIRBP-AS1Q8TBR5 109 aa10.86□□□□□ -0.67
NR1H3-229ENST00000527464 CARHSP1Q9Y2V2 147 aaKnown RBP10.86□□□□□ -0.67
NR1H3-229ENST00000527464 K7EMI3 77 aa10.85□□□□□ -0.67
NR1H3-229ENST00000527464 PLA2G1BP04054 148 aaKnown RBP10.85□□□□□ -0.67
NR1H3-229ENST00000527464 HIGD2BQ4VC39 106 aa10.85□□□□□ -0.67
NR1H3-229ENST00000527464 LINC00528Q8N1L1 170 aa10.85□□□□□ -0.67
NR1H3-229ENST00000527464 Q8N8P6 123 aa10.85□□□□□ -0.67
NR1H3-229ENST00000527464 TRAV13-1A0A0B4J241 112 aa10.84□□□□□ -0.67
NR1H3-229ENST00000527464 INAFM2P0DMQ5 153 aa10.84□□□□□ -0.67
NR1H3-229ENST00000527464 RHEBQ15382 184 aa10.84□□□□□ -0.67
NR1H3-229ENST00000527464 PYGO1Q9Y3Y4 419 aa10.84□□□□□ -0.67
NR1H3-229ENST00000527464 FLG2Q5D862 2391 aaPredicted RBP10.83□□□□□ -0.68
NR1H3-229ENST00000527464 LOC389332A0A1B0GUA5 103 aa10.83□□□□□ -0.68
NR1H3-229ENST00000527464 COX7A2LO14548 114 aa10.83□□□□□ -0.68
NR1H3-229ENST00000527464 CIRBPQ14011 172 aaKnown RBP10.83□□□□□ -0.68
NR1H3-229ENST00000527464 COX19Q49B96 90 aa10.83□□□□□ -0.68
NR1H3-229ENST00000527464 RNASE13Q5GAN3 156 aaKnown RBP10.83□□□□□ -0.68
NR1H3-229ENST00000527464 NXT2Q9NPJ8 142 aaKnown RBP10.83□□□□□ -0.68
NR1H3-229ENST00000527464 IFI27P40305 119 aaPredicted RBP10.82□□□□□ -0.68
NR1H3-229ENST00000527464 FAM104AQ969W3 186 aa10.82□□□□□ -0.68
NR1H3-229ENST00000527464 GNB1LQ9BYB4 327 aa10.82□□□□□ -0.68
NR1H3-229ENST00000527464 MALP21145 153 aa10.81□□□□□ -0.68
NR1H3-229ENST00000527464 ORMDL2Q53FV1 153 aa10.81□□□□□ -0.68
NR1H3-229ENST00000527464 PKIGQ9Y2B9 76 aa10.81□□□□□ -0.68
NR1H3-229ENST00000527464 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.81□□□□□ -0.68
NR1H3-229ENST00000527464 ZNF561-AS1K7EIQ3 104 aa10.8□□□□□ -0.68
NR1H3-229ENST00000527464 G0S2P27469 103 aa10.8□□□□□ -0.68
NR1H3-229ENST00000527464 CYSLTR1Q9Y271 337 aa10.8□□□□□ -0.68
NR1H3-229ENST00000527464 APOMO95445 188 aa10.79□□□□□ -0.68
NR1H3-229ENST00000527464 NPSP0C0P6 89 aa10.79□□□□□ -0.68
NR1H3-229ENST00000527464 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
NR1H3-229ENST00000527464 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
NR1H3-229ENST00000527464 DMBT1Q9UGM3 2413 aaPredicted RBP10.78□□□□□ -0.68
NR1H3-229ENST00000527464 IFITM10A6NMD0 228 aa10.78□□□□□ -0.68
NR1H3-229ENST00000527464 MT-ND6P03923 174 aa10.78□□□□□ -0.68
NR1H3-229ENST00000527464 C2orf66Q6UXQ4 117 aa10.78□□□□□ -0.68
NR1H3-229ENST00000527464 TMEM141Q96I45 108 aa10.78□□□□□ -0.68
NR1H3-229ENST00000527464 IGLV4-3A0A075B6K6 122 aa10.77□□□□□ -0.69
NR1H3-229ENST00000527464 PANO1I0J062 215 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms