RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 TMEM243Q9BU79 118 aa14.22□□□□□ -0.13
PKP3-205ENST00000527442 HBDP02042 147 aa14.21□□□□□ -0.13
PKP3-205ENST00000527442 ESRGQ1W209 222 aa14.21□□□□□ -0.13
PKP3-205ENST00000527442 UPK3BQ9BT76 320 aa14.21□□□□□ -0.13
PKP3-205ENST00000527442 LINC01549A6NIU2 74 aa14.2□□□□□ -0.14
PKP3-205ENST00000527442 H7C423 109 aa14.2□□□□□ -0.14
PKP3-205ENST00000527442 CYSLTR1Q9Y271 337 aa14.2□□□□□ -0.14
PKP3-205ENST00000527442 C2orf66Q6UXQ4 117 aa14.19□□□□□ -0.14
PKP3-205ENST00000527442 TMEM18Q96B42 140 aa14.19□□□□□ -0.14
PKP3-205ENST00000527442 C5orf52A6NGY3 159 aa14.18□□□□□ -0.14
PKP3-205ENST00000527442 FUSP35637 526 aaKnown RBP eCLIP14.18□□□□□ -0.14
PKP3-205ENST00000527442 PMCHL1Q16048 86 aa14.18□□□□□ -0.14
PKP3-205ENST00000527442 TOMM6Q96B49 74 aa14.18□□□□□ -0.14
PKP3-205ENST00000527442 MRPS16Q9Y3D3 137 aaKnown RBP14.18□□□□□ -0.14
PKP3-205ENST00000527442 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.17□□□□□ -0.14
PKP3-205ENST00000527442 IGKV2-29A2NJV5 120 aaPredicted RBP14.17□□□□□ -0.14
PKP3-205ENST00000527442 Q6ZRN7 208 aaPredicted RBP14.17□□□□□ -0.14
PKP3-205ENST00000527442 FAM19A2Q8N3H0 131 aa14.17□□□□□ -0.14
PKP3-205ENST00000527442 CHCHD5Q9BSY4 110 aa14.17□□□□□ -0.14
PKP3-205ENST00000527442 FAT1Q14517 4588 aa14.17□□□□□ -0.14
PKP3-205ENST00000527442 TRAV8-6A0A0B4J262 113 aa14.16□□□□□ -0.14
PKP3-205ENST00000527442 PKIAP61925 76 aa14.16□□□□□ -0.14
PKP3-205ENST00000527442 SNRPEP62304 92 aaKnown RBP14.16□□□□□ -0.14
PKP3-205ENST00000527442 RPL39P62891 51 aaKnown RBP14.16□□□□□ -0.14
PKP3-205ENST00000527442 PDZD11Q5EBL8 140 aa14.16□□□□□ -0.14
PKP3-205ENST00000527442 MRPL52Q86TS9 123 aaKnown RBP14.16□□□□□ -0.14
PKP3-205ENST00000527442 HIST3H2BBQ8N257 126 aa14.16□□□□□ -0.14
PKP3-205ENST00000527442 PACRGQ96M98 296 aaPredicted RBP14.16□□□□□ -0.14
PKP3-205ENST00000527442 TIMM21Q9BVV7 248 aa14.16□□□□□ -0.14
PKP3-205ENST00000527442 UBE2L6O14933 153 aa14.15□□□□□ -0.14
PKP3-205ENST00000527442 XGP55808 180 aa14.15□□□□□ -0.14
PKP3-205ENST00000527442 SMAGPQ0VAQ4 97 aa14.15□□□□□ -0.14
PKP3-205ENST00000527442 Q5VSD8 79 aa14.15□□□□□ -0.14
PKP3-205ENST00000527442 UBE2D4Q9Y2X8 147 aa14.15□□□□□ -0.14
PKP3-205ENST00000527442 MYCBP2O75592 4640 aa14.14□□□□□ -0.15
PKP3-205ENST00000527442 SPANXA1Q9NS26 97 aa14.14□□□□□ -0.15
PKP3-205ENST00000527442 PYGO1Q9Y3Y4 419 aa14.14□□□□□ -0.15
PKP3-205ENST00000527442 FGF6P10767 208 aa14.13□□□□□ -0.15
PKP3-205ENST00000527442 ZNF25P17030 456 aaPredicted RBP14.13□□□□□ -0.15
PKP3-205ENST00000527442 GAGE6Q13070 117 aa14.13□□□□□ -0.15
PKP3-205ENST00000527442 TIMM17AQ99595 171 aa14.13□□□□□ -0.15
PKP3-205ENST00000527442 CSDC2Q9Y534 153 aaKnown RBP14.13□□□□□ -0.15
PKP3-205ENST00000527442 VPS13BQ7Z7G8 4022 aa14.13□□□□□ -0.15
PKP3-205ENST00000527442 IGIPA6NJ69 53 aa14.12□□□□□ -0.15
PKP3-205ENST00000527442 NPSP0C0P6 89 aa14.12□□□□□ -0.15
PKP3-205ENST00000527442 WFDC10BQ8IUB3 73 aa14.12□□□□□ -0.15
PKP3-205ENST00000527442 A0A1B0GUV1 79 aa14.11□□□□□ -0.15
PKP3-205ENST00000527442 ERASQ7Z444 233 aa14.11□□□□□ -0.15
PKP3-205ENST00000527442 PGPEP1Q9NXJ5 209 aa14.11□□□□□ -0.15
PKP3-205ENST00000527442 FLG2Q5D862 2391 aaPredicted RBP14.11□□□□□ -0.15
PKP3-205ENST00000527442 ATP5LO75964 103 aa14.1□□□□□ -0.15
PKP3-205ENST00000527442 LEPROTL1O95214 131 aa14.1□□□□□ -0.15
PKP3-205ENST00000527442 S100A2P29034 98 aa14.1□□□□□ -0.15
PKP3-205ENST00000527442 MPV17L2Q567V2 206 aa14.1□□□□□ -0.15
PKP3-205ENST00000527442 AMMECR1LQ6DCA0 310 aa14.1□□□□□ -0.15
PKP3-205ENST00000527442 SCGB3A1Q96QR1 104 aa14.1□□□□□ -0.15
PKP3-205ENST00000527442 MRPS36P82909 103 aaKnown RBP14.09□□□□□ -0.15
PKP3-205ENST00000527442 TMEM141Q96I45 108 aa14.09□□□□□ -0.15
PKP3-205ENST00000527442 HSPB8Q9UJY1 196 aa14.09□□□□□ -0.15
PKP3-205ENST00000527442 IFITM10A6NMD0 228 aa14.08□□□□□ -0.16
PKP3-205ENST00000527442 DNAH10OSP0CZ25 163 aa14.08□□□□□ -0.16
PKP3-205ENST00000527442 RBX1P62877 108 aa14.08□□□□□ -0.16
PKP3-205ENST00000527442 LINC01556Q5JQF7 62 aa14.08□□□□□ -0.16
PKP3-205ENST00000527442 HIST1H2BLQ99880 126 aa14.08□□□□□ -0.16
PKP3-205ENST00000527442 SRRM2Q9UQ35 2752 aaKnown RBP14.07□□□□□ -0.16
PKP3-205ENST00000527442 IGLV4-3A0A075B6K6 122 aa14.07□□□□□ -0.16
PKP3-205ENST00000527442 A0A087WX48 190 aa14.07□□□□□ -0.16
PKP3-205ENST00000527442 TMEM262E9PQX1 116 aa14.07□□□□□ -0.16
PKP3-205ENST00000527442 KRTAP10-1P60331 282 aa14.07□□□□□ -0.16
PKP3-205ENST00000527442 CDPF1Q6NVV7 123 aa14.07□□□□□ -0.16
PKP3-205ENST00000527442 OR5A1Q8NGJ0 315 aa14.07□□□□□ -0.16
PKP3-205ENST00000527442 FAM104AQ969W3 186 aa14.07□□□□□ -0.16
PKP3-205ENST00000527442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.06□□□□□ -0.16
PKP3-205ENST00000527442 SIVA1O15304 175 aa14.06□□□□□ -0.16
PKP3-205ENST00000527442 DGAT2L7PQ6IED9 249 aa14.06□□□□□ -0.16
PKP3-205ENST00000527442 Q6ZUT4 128 aa14.06□□□□□ -0.16
PKP3-205ENST00000527442 LINC00173Q6ZV60 143 aa14.06□□□□□ -0.16
PKP3-205ENST00000527442 TMEM101Q96IK0 257 aa14.06□□□□□ -0.16
PKP3-205ENST00000527442 IGLV4-60A0A075B6I1 120 aa14.05□□□□□ -0.16
PKP3-205ENST00000527442 EREGO14944 169 aa14.05□□□□□ -0.16
PKP3-205ENST00000527442 FABP4P15090 132 aa14.05□□□□□ -0.16
PKP3-205ENST00000527442 Q8N3U1 123 aa14.05□□□□□ -0.16
PKP3-205ENST00000527442 Q8N976 141 aa14.05□□□□□ -0.16
PKP3-205ENST00000527442 IFI27L1Q96BM0 104 aa14.05□□□□□ -0.16
PKP3-205ENST00000527442 CDC42SE2Q9NRR3 84 aa14.05□□□□□ -0.16
PKP3-205ENST00000527442 PAPPA-AS1Q5QFB9 102 aa14.04□□□□□ -0.16
PKP3-205ENST00000527442 SMR3BP02814 79 aaPredicted RBP14.03□□□□□ -0.16
PKP3-205ENST00000527442 Q6ZN92 141 aa14.03□□□□□ -0.16
PKP3-205ENST00000527442 ZNF664Q8N3J9 261 aa14.03□□□□□ -0.16
PKP3-205ENST00000527442 BAALCQ8WXS3 180 aa14.03□□□□□ -0.16
PKP3-205ENST00000527442 OPRPNQ99935 248 aaPredicted RBP14.03□□□□□ -0.16
PKP3-205ENST00000527442 AMELXQ99217 191 aa14.02□□□□□ -0.17
PKP3-205ENST00000527442 IGHV3-30P01768 117 aa14.01□□□□□ -0.17
PKP3-205ENST00000527442 IGHV3-33P01772 117 aa14.01□□□□□ -0.17
PKP3-205ENST00000527442 IGHV3-30-3P0DP02 117 aa14.01□□□□□ -0.17
PKP3-205ENST00000527442 IGHV3-30-5P0DP03 117 aa14.01□□□□□ -0.17
PKP3-205ENST00000527442 A0A087WTM6 91 aa14□□□□□ -0.17
PKP3-205ENST00000527442 K7EP13 123 aa14□□□□□ -0.17
PKP3-205ENST00000527442 TEX43Q6ZNM6 134 aa14□□□□□ -0.17
PKP3-205ENST00000527442 MAP1LC3CQ9BXW4 147 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms