RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ZNF25P17030 456 aaPredicted RBP6.63□□□□□ -1.35
PRPF40B-204ENST00000527253 RIGQ13278 110 aa6.63□□□□□ -1.35
PRPF40B-204ENST00000527253 ADIRFQ15847 76 aa6.63□□□□□ -1.35
PRPF40B-204ENST00000527253 MRPL52Q86TS9 123 aaKnown RBP6.63□□□□□ -1.35
PRPF40B-204ENST00000527253 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
PRPF40B-204ENST00000527253 AP5S1Q9NUS5 200 aa6.63□□□□□ -1.35
PRPF40B-204ENST00000527253 NAT8BQ9UHF3 227 aa6.63□□□□□ -1.35
PRPF40B-204ENST00000527253 FAT3Q8TDW7 4589 aa6.62□□□□□ -1.35
PRPF40B-204ENST00000527253 A0A087WYN8 130 aa6.62□□□□□ -1.35
PRPF40B-204ENST00000527253 GVQW2A0A096LPI5 108 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-204ENST00000527253 XCL1P47992 114 aa6.62□□□□□ -1.35
PRPF40B-204ENST00000527253 PEA15Q15121 130 aa6.62□□□□□ -1.35
PRPF40B-204ENST00000527253 MRPL51Q4U2R6 128 aaKnown RBP6.62□□□□□ -1.35
PRPF40B-204ENST00000527253 CFAP161Q6P656 301 aa6.62□□□□□ -1.35
PRPF40B-204ENST00000527253 SPACA4Q8TDM5 124 aa6.62□□□□□ -1.35
PRPF40B-204ENST00000527253 NAT8Q9UHE5 227 aa6.62□□□□□ -1.35
PRPF40B-204ENST00000527253 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.61□□□□□ -1.35
PRPF40B-204ENST00000527253 VCYO14598 125 aa6.61□□□□□ -1.35
PRPF40B-204ENST00000527253 CCL25O15444 150 aa6.61□□□□□ -1.35
PRPF40B-204ENST00000527253 COX6A2Q02221 97 aa6.61□□□□□ -1.35
PRPF40B-204ENST00000527253 FAM104BQ5XKR9 115 aa6.61□□□□□ -1.35
PRPF40B-204ENST00000527253 PRSS3P2Q8NHM4 247 aa6.61□□□□□ -1.35
PRPF40B-204ENST00000527253 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
PRPF40B-204ENST00000527253 TMEM101Q96IK0 257 aa6.61□□□□□ -1.35
PRPF40B-204ENST00000527253 BTF3L4Q96K17 158 aa6.61□□□□□ -1.35
PRPF40B-204ENST00000527253 PKHD1L1Q86WI1 4243 aa6.6□□□□□ -1.35
PRPF40B-204ENST00000527253 C7orf77A4D0Y5 90 aa6.6□□□□□ -1.35
PRPF40B-204ENST00000527253 CAMPP49913 170 aa6.6□□□□□ -1.35
PRPF40B-204ENST00000527253 SUMO2P61956 95 aaKnown RBP6.6□□□□□ -1.35
PRPF40B-204ENST00000527253 ZNF664Q8N3J9 261 aa6.6□□□□□ -1.35
PRPF40B-204ENST00000527253 OXTP01178 125 aa6.59□□□□□ -1.35
PRPF40B-204ENST00000527253 RNASE13Q5GAN3 156 aaKnown RBP6.59□□□□□ -1.35
PRPF40B-204ENST00000527253 FAM104AQ969W3 186 aa6.59□□□□□ -1.35
PRPF40B-204ENST00000527253 DPH3Q96FX2 82 aa6.59□□□□□ -1.35
PRPF40B-204ENST00000527253 SMDT1Q9H4I9 107 aa6.59□□□□□ -1.35
PRPF40B-204ENST00000527253 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
PRPF40B-204ENST00000527253 UBE2D4Q9Y2X8 147 aa6.59□□□□□ -1.35
PRPF40B-204ENST00000527253 TRBV24-1A0A075B6N3 115 aa6.58□□□□□ -1.36
PRPF40B-204ENST00000527253 A0A1B0GXF2 115 aa6.58□□□□□ -1.36
PRPF40B-204ENST00000527253 PPP1R17O96001 155 aa6.58□□□□□ -1.36
PRPF40B-204ENST00000527253 FCER1GP30273 86 aa6.58□□□□□ -1.36
PRPF40B-204ENST00000527253 SS18Q15532 418 aa6.58□□□□□ -1.36
PRPF40B-204ENST00000527253 MRPL54Q6P161 138 aaKnown RBP6.58□□□□□ -1.36
PRPF40B-204ENST00000527253 CD164L2Q6UWJ8 174 aa6.58□□□□□ -1.36
PRPF40B-204ENST00000527253 A0A096LNI7 61 aa6.57□□□□□ -1.36
PRPF40B-204ENST00000527253 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
PRPF40B-204ENST00000527253 IGKV2-24A0A0C4DH68 120 aa6.57□□□□□ -1.36
PRPF40B-204ENST00000527253 LINC00862A6NCI5 91 aa6.57□□□□□ -1.36
PRPF40B-204ENST00000527253 TNFRSF6BO95407 300 aa6.57□□□□□ -1.36
PRPF40B-204ENST00000527253 MAJINQ3KP22 176 aa6.57□□□□□ -1.36
PRPF40B-204ENST00000527253 C20orf78Q9BR46 151 aa6.57□□□□□ -1.36
PRPF40B-204ENST00000527253 CSDC2Q9Y534 153 aaKnown RBP6.57□□□□□ -1.36
PRPF40B-204ENST00000527253 HMCN2Q8NDA2 5059 aa6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 A0A1B0GW15 77 aa6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 D6R8Y8 96 aa6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 PHOX2AO14813 284 aa6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 PPP1R2P9O14990 202 aa6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 NPYP01303 97 aa6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 CKS2P33552 79 aa6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 RPL32P62910 135 aaKnown RBP6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 Q6ZUT4 128 aa6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 KIR2DL4Q99706 377 aa6.56□□□□□ -1.36
PRPF40B-204ENST00000527253 TRAV13-1A0A0B4J241 112 aa6.55□□□□□ -1.36
PRPF40B-204ENST00000527253 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
PRPF40B-204ENST00000527253 RPL39P62891 51 aaKnown RBP6.55□□□□□ -1.36
PRPF40B-204ENST00000527253 HBBP68871 147 aa6.55□□□□□ -1.36
PRPF40B-204ENST00000527253 STPG4Q8N801 248 aa6.55□□□□□ -1.36
PRPF40B-204ENST00000527253 OPRPNQ99935 248 aaPredicted RBP6.55□□□□□ -1.36
PRPF40B-204ENST00000527253 TIMM21Q9BVV7 248 aa6.55□□□□□ -1.36
PRPF40B-204ENST00000527253 IGLV4-69A0A075B6H9 119 aa6.54□□□□□ -1.36
PRPF40B-204ENST00000527253 C1orf196B1AJZ1 125 aa6.54□□□□□ -1.36
PRPF40B-204ENST00000527253 SYCNQ0VAF6 134 aa6.54□□□□□ -1.36
PRPF40B-204ENST00000527253 CARD19Q96LW7 228 aa6.54□□□□□ -1.36
PRPF40B-204ENST00000527253 SMIM2Q9BVW6 85 aa6.54□□□□□ -1.36
PRPF40B-204ENST00000527253 COX7A2LO14548 114 aa6.53□□□□□ -1.36
PRPF40B-204ENST00000527253 TCAPO15273 167 aa6.53□□□□□ -1.36
PRPF40B-204ENST00000527253 Q6ZRU5 148 aa6.53□□□□□ -1.36
PRPF40B-204ENST00000527253 C5orf38Q86SI9 138 aa6.53□□□□□ -1.36
PRPF40B-204ENST00000527253 F8W036 122 aa6.52□□□□□ -1.37
PRPF40B-204ENST00000527253 ZNF561-AS1K7EIQ3 104 aa6.52□□□□□ -1.37
PRPF40B-204ENST00000527253 S100A8P05109 93 aa6.52□□□□□ -1.37
PRPF40B-204ENST00000527253 TMEM136Q6ZRR5 245 aa6.52□□□□□ -1.37
PRPF40B-204ENST00000527253 PPBPP02775 128 aa6.51□□□□□ -1.37
PRPF40B-204ENST00000527253 MALP21145 153 aa6.51□□□□□ -1.37
PRPF40B-204ENST00000527253 PRR3P79522 188 aaKnown RBP6.51□□□□□ -1.37
PRPF40B-204ENST00000527253 SMAGPQ0VAQ4 97 aa6.51□□□□□ -1.37
PRPF40B-204ENST00000527253 ATP5L2Q7Z4Y8 100 aa6.51□□□□□ -1.37
PRPF40B-204ENST00000527253 C7orf33Q8WU49 177 aa6.51□□□□□ -1.37
PRPF40B-204ENST00000527253 TMEM18Q96B42 140 aa6.51□□□□□ -1.37
PRPF40B-204ENST00000527253 PRELID3AQ96N28 172 aa6.51□□□□□ -1.37
PRPF40B-204ENST00000527253 IGHV3OR16-9A0A0B4J2B5 98 aa6.5□□□□□ -1.37
PRPF40B-204ENST00000527253 A0A1W2PNN7 141 aa6.5□□□□□ -1.37
PRPF40B-204ENST00000527253 PTTG1IPP53801 180 aa6.5□□□□□ -1.37
PRPF40B-204ENST00000527253 MRPS36P82909 103 aaKnown RBP6.5□□□□□ -1.37
PRPF40B-204ENST00000527253 SERTAD4-AS1Q5TG53 156 aa6.5□□□□□ -1.37
PRPF40B-204ENST00000527253 ORMDL3Q8N138 153 aa6.5□□□□□ -1.37
PRPF40B-204ENST00000527253 SPANXA1Q9NS26 97 aa6.5□□□□□ -1.37
PRPF40B-204ENST00000527253 A0A0J9YXV3 536 aa6.49□□□□□ -1.37
PRPF40B-204ENST00000527253 PRSS47A8MTI9 375 aa6.49□□□□□ -1.37
PRPF40B-204ENST00000527253 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms