RNA–Protein interactions for RNA: ENST00000527052.5

NOD2-204, Transcript of nucleotide binding oligomerization domain containing 2, human

TSL 1 (best)

Gene NOD2, Length 338 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOD2-204	ENST00000527052	RAB4A	P20338	218 aa		9.51	□□□□□ -0.89
NOD2-204	ENST00000527052	RPL37A	P61513	92 aa	Known RBP	9.51	□□□□□ -0.89
NOD2-204	ENST00000527052	LAMTOR2	Q9Y2Q5	125 aa		9.51	□□□□□ -0.89
NOD2-204	ENST00000527052	UBE2L6	O14933	153 aa		9.5	□□□□□ -0.89
NOD2-204	ENST00000527052	CNBP	P62633	177 aa	Known RBP	9.5	□□□□□ -0.89
NOD2-204	ENST00000527052	AMN1	Q8IY45	258 aa		9.5	□□□□□ -0.89
NOD2-204	ENST00000527052	C20orf203	Q8NBC4	194 aa		9.5	□□□□□ -0.89
NOD2-204	ENST00000527052	IGLV10-54	A0A075B6I4	117 aa		9.49	□□□□□ -0.89
NOD2-204	ENST00000527052	PHOX2A	O14813	284 aa		9.49	□□□□□ -0.89
NOD2-204	ENST00000527052	APCS	P02743	223 aa		9.49	□□□□□ -0.89
NOD2-204	ENST00000527052	CKS2	P33552	79 aa		9.49	□□□□□ -0.89
NOD2-204	ENST00000527052	COTL1	Q14019	142 aa		9.49	□□□□□ -0.89
NOD2-204	ENST00000527052	CBLN2	Q8IUK8	224 aa		9.49	□□□□□ -0.89
NOD2-204	ENST00000527052	ORMDL3	Q8N138	153 aa		9.49	□□□□□ -0.89
NOD2-204	ENST00000527052	AMT	P48728	403 aa		9.48	□□□□□ -0.89
NOD2-204	ENST00000527052	SERTAD4-AS1	Q5TG53	156 aa		9.48	□□□□□ -0.89
NOD2-204	ENST00000527052	TMEM136	Q6ZRR5	245 aa		9.48	□□□□□ -0.89
NOD2-204	ENST00000527052	AP5S1	Q9NUS5	200 aa		9.48	□□□□□ -0.89
NOD2-204	ENST00000527052	TRAPPC1	Q9Y5R8	145 aa		9.48	□□□□□ -0.89
NOD2-204	ENST00000527052	HMCN2	Q8NDA2	5059 aa		9.48	□□□□□ -0.89
NOD2-204	ENST00000527052	IGLV4-60	A0A075B6I1	120 aa		9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	TGIF2-C20orf24	A0A0A6YYL0	155 aa		9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	hDV102S1	A0JD36	115 aa		9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	TCAP	O15273	167 aa		9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	MRPL51	Q4U2R6	128 aa	Known RBP	9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	SDIM1	Q6ZPB5	146 aa		9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	RNF185	Q96GF1	192 aa		9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	ST20	Q9HBF5	79 aa		9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	PKHD1L1	Q86WI1	4243 aa		9.47	□□□□□ -0.89
NOD2-204	ENST00000527052	TRBV6-5	A0A0K0K1A5	114 aa		9.46	□□□□□ -0.9
NOD2-204	ENST00000527052	C20orf78	Q9BR46	151 aa		9.46	□□□□□ -0.9
NOD2-204	ENST00000527052	IGHV3-64	A0A075B6Q5	118 aa		9.45	□□□□□ -0.9
NOD2-204	ENST00000527052	FABP9	Q0Z7S8	132 aa		9.45	□□□□□ -0.9
NOD2-204	ENST00000527052	CIRBP	Q14011	172 aa	Known RBP	9.45	□□□□□ -0.9
NOD2-204	ENST00000527052	YPEL4	Q96NS1	127 aa		9.45	□□□□□ -0.9
NOD2-204	ENST00000527052	MRPL18	Q9H0U6	180 aa	Known RBP	9.45	□□□□□ -0.9
NOD2-204	ENST00000527052		D6R8Y8	96 aa		9.44	□□□□□ -0.9
NOD2-204	ENST00000527052	NCR2	O95944	276 aa		9.44	□□□□□ -0.9
NOD2-204	ENST00000527052	PRELID3A	Q96N28	172 aa		9.44	□□□□□ -0.9
NOD2-204	ENST00000527052	TRAV26-2	A0A0B4J265	109 aa		9.43	□□□□□ -0.9
NOD2-204	ENST00000527052	PANO1	I0J062	215 aa		9.43	□□□□□ -0.9
NOD2-204	ENST00000527052	RPS10	P46783	165 aa	Known RBP	9.43	□□□□□ -0.9
NOD2-204	ENST00000527052	RPL32	P62910	135 aa	Known RBP	9.43	□□□□□ -0.9
NOD2-204	ENST00000527052	CFAP161	Q6P656	301 aa		9.43	□□□□□ -0.9
NOD2-204	ENST00000527052	MAP1LC3A	Q9H492	121 aa		9.43	□□□□□ -0.9
NOD2-204	ENST00000527052		H7C423	109 aa		9.42	□□□□□ -0.9
NOD2-204	ENST00000527052		I3L3M4	83 aa		9.42	□□□□□ -0.9
NOD2-204	ENST00000527052	VCY	O14598	125 aa		9.42	□□□□□ -0.9
NOD2-204	ENST00000527052	TNFRSF6B	O95407	300 aa		9.42	□□□□□ -0.9
NOD2-204	ENST00000527052	RAB5A	P20339	215 aa		9.42	□□□□□ -0.9
NOD2-204	ENST00000527052	SUMO2	P61956	95 aa	Known RBP	9.42	□□□□□ -0.9
NOD2-204	ENST00000527052	AMMECR1L	Q6DCA0	310 aa		9.42	□□□□□ -0.9
NOD2-204	ENST00000527052	KIR2DL4	Q99706	377 aa		9.42	□□□□□ -0.9
NOD2-204	ENST00000527052	SDHAF1	A6NFY7	115 aa		9.41	□□□□□ -0.9
NOD2-204	ENST00000527052	COLCA2	A8K830	154 aa		9.41	□□□□□ -0.9
NOD2-204	ENST00000527052		K7EMI3	77 aa		9.41	□□□□□ -0.9
NOD2-204	ENST00000527052	PMCH	P20382	165 aa		9.41	□□□□□ -0.9
NOD2-204	ENST00000527052	SMAGP	Q0VAQ4	97 aa		9.41	□□□□□ -0.9
NOD2-204	ENST00000527052	GAGE12H	A6NDE8	117 aa		9.4	□□□□□ -0.9
NOD2-204	ENST00000527052	PRSS47	A8MTI9	375 aa		9.4	□□□□□ -0.9
NOD2-204	ENST00000527052	SCO1	O75880	301 aa		9.4	□□□□□ -0.9
NOD2-204	ENST00000527052	G0S2	P27469	103 aa		9.4	□□□□□ -0.9
NOD2-204	ENST00000527052	C15orf56	Q8N910	161 aa		9.4	□□□□□ -0.9
NOD2-204	ENST00000527052	NRAC	Q8N912	160 aa		9.4	□□□□□ -0.9
NOD2-204	ENST00000527052	RPL39L	Q96EH5	51 aa	Known RBP	9.4	□□□□□ -0.9
NOD2-204	ENST00000527052	DPH3	Q96FX2	82 aa		9.4	□□□□□ -0.9
NOD2-204	ENST00000527052	NXT2	Q9NPJ8	142 aa	Known RBP	9.4	□□□□□ -0.9
NOD2-204	ENST00000527052	TRBV27	A0A0K0K1C4	114 aa		9.39	□□□□□ -0.91
NOD2-204	ENST00000527052	SLPI	P03973	132 aa		9.39	□□□□□ -0.91
NOD2-204	ENST00000527052	ZNF25	P17030	456 aa	Predicted RBP	9.39	□□□□□ -0.91
NOD2-204	ENST00000527052	HNRNPA3	P51991	378 aa	Known RBP	9.39	□□□□□ -0.91
NOD2-204	ENST00000527052	RAB5B	P61020	215 aa		9.39	□□□□□ -0.91
NOD2-204	ENST00000527052	RNASEK	Q6P5S7	137 aa	Known RBP	9.39	□□□□□ -0.91
NOD2-204	ENST00000527052	SPACA4	Q8TDM5	124 aa		9.39	□□□□□ -0.91
NOD2-204	ENST00000527052		A0A087WYN8	130 aa		9.38	□□□□□ -0.91
NOD2-204	ENST00000527052	IGKV3OR2-268	A0A0C4DH90	116 aa		9.38	□□□□□ -0.91
NOD2-204	ENST00000527052	SMKR1	H3BMG3	65 aa		9.38	□□□□□ -0.91
NOD2-204	ENST00000527052	FCER1G	P30273	86 aa		9.38	□□□□□ -0.91
NOD2-204	ENST00000527052	POLR2K	P53803	58 aa	Known RBP	9.38	□□□□□ -0.91
NOD2-204	ENST00000527052	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	9.38	□□□□□ -0.91
NOD2-204	ENST00000527052	TMEM18	Q96B42	140 aa		9.38	□□□□□ -0.91
NOD2-204	ENST00000527052	ALKBH7	Q9BT30	221 aa	Predicted RBP	9.38	□□□□□ -0.91
NOD2-204	ENST00000527052	SMIM2	Q9BVW6	85 aa		9.38	□□□□□ -0.91
NOD2-204	ENST00000527052	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	9.37	□□□□□ -0.91
NOD2-204	ENST00000527052	IGKV2-29	A2NJV5	120 aa	Predicted RBP	9.37	□□□□□ -0.91
NOD2-204	ENST00000527052	LINC01549	A6NIU2	74 aa		9.37	□□□□□ -0.91
NOD2-204	ENST00000527052	NPY	P01303	97 aa		9.37	□□□□□ -0.91
NOD2-204	ENST00000527052	FGF6	P10767	208 aa		9.37	□□□□□ -0.91
NOD2-204	ENST00000527052	KIAA1644	Q3SXP7	199 aa		9.37	□□□□□ -0.91
NOD2-204	ENST00000527052		Q6ZRU5	148 aa		9.37	□□□□□ -0.91
NOD2-204	ENST00000527052	PLAC8	Q9NZF1	115 aa		9.37	□□□□□ -0.91
NOD2-204	ENST00000527052	CHTF8	P0CG12	524 aa		9.36	□□□□□ -0.91
NOD2-204	ENST00000527052		Q8N8P6	123 aa		9.36	□□□□□ -0.91
NOD2-204	ENST00000527052	PRSS3P2	Q8NHM4	247 aa		9.36	□□□□□ -0.91
NOD2-204	ENST00000527052	C7orf33	Q8WU49	177 aa		9.36	□□□□□ -0.91
NOD2-204	ENST00000527052	TMEM101	Q96IK0	257 aa		9.36	□□□□□ -0.91
NOD2-204	ENST00000527052	PLA2G2D	Q9UNK4	145 aa		9.36	□□□□□ -0.91
NOD2-204	ENST00000527052	GVQW2	A0A096LPI5	108 aa	Predicted RBP	9.35	□□□□□ -0.91

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