RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 FAT1Q14517 4588 aa13.61□□□□□ -0.23
TRAPPC9-215ENST00000524162 TNFRSF6BO95407 300 aa13.6□□□□□ -0.23
TRAPPC9-215ENST00000524162 SEC11CQ9BY50 192 aa13.6□□□□□ -0.23
TRAPPC9-215ENST00000524162 ORMDL3Q8N138 153 aa13.59□□□□□ -0.23
TRAPPC9-215ENST00000524162 TIMM21Q9BVV7 248 aa13.59□□□□□ -0.23
TRAPPC9-215ENST00000524162 CDC42SE2Q9NRR3 84 aa13.59□□□□□ -0.23
TRAPPC9-215ENST00000524162 FAM30AQ9NZY2 134 aa13.59□□□□□ -0.23
TRAPPC9-215ENST00000524162 LAMTOR2Q9Y2Q5 125 aa13.59□□□□□ -0.23
TRAPPC9-215ENST00000524162 D6R8Y8 96 aa13.58□□□□□ -0.24
TRAPPC9-215ENST00000524162 CCL25O15444 150 aa13.58□□□□□ -0.24
TRAPPC9-215ENST00000524162 ADCYAP1P18509 176 aa13.58□□□□□ -0.24
TRAPPC9-215ENST00000524162 CNBPP62633 177 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-215ENST00000524162 TMEM18Q96B42 140 aa13.58□□□□□ -0.24
TRAPPC9-215ENST00000524162 SMIM2Q9BVW6 85 aa13.58□□□□□ -0.24
TRAPPC9-215ENST00000524162 CTDSP1Q9GZU7 261 aa13.58□□□□□ -0.24
TRAPPC9-215ENST00000524162 VPS13BQ7Z7G8 4022 aa13.57□□□□□ -0.24
TRAPPC9-215ENST00000524162 PRSS47A8MTI9 375 aa13.57□□□□□ -0.24
TRAPPC9-215ENST00000524162 EPM2AB3EWF7 344 aa13.57□□□□□ -0.24
TRAPPC9-215ENST00000524162 CFAP161Q6P656 301 aa13.57□□□□□ -0.24
TRAPPC9-215ENST00000524162 ZNF664Q8N3J9 261 aa13.57□□□□□ -0.24
TRAPPC9-215ENST00000524162 C9orf163Q8N9P6 203 aa13.57□□□□□ -0.24
TRAPPC9-215ENST00000524162 TRAV9-1A0A075B6T8 112 aa13.56□□□□□ -0.24
TRAPPC9-215ENST00000524162 CHCHD10Q8WYQ3 142 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-215ENST00000524162 SRRM2Q9UQ35 2752 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-215ENST00000524162 TMEM136Q6ZRR5 245 aa13.55□□□□□ -0.24
TRAPPC9-215ENST00000524162 UBE2D4Q9Y2X8 147 aa13.55□□□□□ -0.24
TRAPPC9-215ENST00000524162 LINC00959A0A1B0GUT2 108 aa13.54□□□□□ -0.24
TRAPPC9-215ENST00000524162 GAGE12HA6NDE8 117 aa13.54□□□□□ -0.24
TRAPPC9-215ENST00000524162 NPYP01303 97 aa13.54□□□□□ -0.24
TRAPPC9-215ENST00000524162 C10orf91Q5T1B1 145 aa13.53□□□□□ -0.24
TRAPPC9-215ENST00000524162 PRELID3AQ96N28 172 aa13.53□□□□□ -0.24
TRAPPC9-215ENST00000524162 IGKV3OR2-268A0A0C4DH90 116 aa13.52□□□□□ -0.25
TRAPPC9-215ENST00000524162 SS18Q15532 418 aa13.52□□□□□ -0.25
TRAPPC9-215ENST00000524162 CHAC1Q9BUX1 264 aa13.52□□□□□ -0.25
TRAPPC9-215ENST00000524162 AP5S1Q9NUS5 200 aa13.52□□□□□ -0.25
TRAPPC9-215ENST00000524162 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-215ENST00000524162 hDV102S1A0JD36 115 aa13.51□□□□□ -0.25
TRAPPC9-215ENST00000524162 FAM229AH3BQW9 127 aa13.51□□□□□ -0.25
TRAPPC9-215ENST00000524162 FOXI1Q12951 378 aa13.51□□□□□ -0.25
TRAPPC9-215ENST00000524162 LINC01620Q4KN68 170 aa13.51□□□□□ -0.25
TRAPPC9-215ENST00000524162 COMMD7Q86VX2 200 aa13.51□□□□□ -0.25
TRAPPC9-215ENST00000524162 C15orf56Q8N910 161 aa13.51□□□□□ -0.25
TRAPPC9-215ENST00000524162 Q5VSD8 79 aa13.5□□□□□ -0.25
TRAPPC9-215ENST00000524162 CD164L2Q6UWJ8 174 aa13.5□□□□□ -0.25
TRAPPC9-215ENST00000524162 SPANXA1Q9NS26 97 aa13.5□□□□□ -0.25
TRAPPC9-215ENST00000524162 GVQW2A0A096LPI5 108 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-215ENST00000524162 C1orf196B1AJZ1 125 aa13.49□□□□□ -0.25
TRAPPC9-215ENST00000524162 K7EMI3 77 aa13.49□□□□□ -0.25
TRAPPC9-215ENST00000524162 CARHSP1Q9Y2V2 147 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-215ENST00000524162 MRPS36P82909 103 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-215ENST00000524162 SDIM1Q6ZPB5 146 aa13.48□□□□□ -0.25
TRAPPC9-215ENST00000524162 RAB5AP20339 215 aa13.47□□□□□ -0.25
TRAPPC9-215ENST00000524162 SCXQ7RTU7 201 aa13.47□□□□□ -0.25
TRAPPC9-215ENST00000524162 SMR3BP02814 79 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-215ENST00000524162 XCL1P47992 114 aa13.46□□□□□ -0.25
TRAPPC9-215ENST00000524162 MAP1LC3AQ9H492 121 aa13.46□□□□□ -0.25
TRAPPC9-215ENST00000524162 IGHV1-58A0A0C4DH39 117 aa13.45□□□□□ -0.26
TRAPPC9-215ENST00000524162 SLPIP03973 132 aa13.45□□□□□ -0.26
TRAPPC9-215ENST00000524162 RHEBQ15382 184 aa13.45□□□□□ -0.26
TRAPPC9-215ENST00000524162 PYGO1Q9Y3Y4 419 aa13.45□□□□□ -0.26
TRAPPC9-215ENST00000524162 IGHV3-64A0A075B6Q5 118 aa13.44□□□□□ -0.26
TRAPPC9-215ENST00000524162 S100PP25815 95 aa13.44□□□□□ -0.26
TRAPPC9-215ENST00000524162 HAMPP81172 84 aa13.44□□□□□ -0.26
TRAPPC9-215ENST00000524162 CIRBPQ14011 172 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-215ENST00000524162 COX19Q49B96 90 aa13.44□□□□□ -0.26
TRAPPC9-215ENST00000524162 Q8N8P6 123 aa13.44□□□□□ -0.26
TRAPPC9-215ENST00000524162 CIRBP-AS1Q8TBR5 109 aa13.44□□□□□ -0.26
TRAPPC9-215ENST00000524162 RPL39P62891 51 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-215ENST00000524162 Q6ZUT4 128 aa13.43□□□□□ -0.26
TRAPPC9-215ENST00000524162 FAM104AQ969W3 186 aa13.43□□□□□ -0.26
TRAPPC9-215ENST00000524162 GNB1LQ9BYB4 327 aa13.42□□□□□ -0.26
TRAPPC9-215ENST00000524162 PLA2G1BP04054 148 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-215ENST00000524162 NPSP0C0P6 89 aa13.41□□□□□ -0.26
TRAPPC9-215ENST00000524162 NXT2Q9NPJ8 142 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-215ENST00000524162 IFI27P40305 119 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-215ENST00000524162 ORMDL2Q53FV1 153 aa13.4□□□□□ -0.26
TRAPPC9-215ENST00000524162 PKIGQ9Y2B9 76 aa13.4□□□□□ -0.26
TRAPPC9-215ENST00000524162 COX7A2LO14548 114 aa13.39□□□□□ -0.27
TRAPPC9-215ENST00000524162 G0S2P27469 103 aa13.39□□□□□ -0.27
TRAPPC9-215ENST00000524162 LINC00528Q8N1L1 170 aa13.39□□□□□ -0.27
TRAPPC9-215ENST00000524162 FLG2Q5D862 2391 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-215ENST00000524162 TRAV13-1A0A0B4J241 112 aa13.38□□□□□ -0.27
TRAPPC9-215ENST00000524162 MT-ND6P03923 174 aa13.38□□□□□ -0.27
TRAPPC9-215ENST00000524162 INAFM2P0DMQ5 153 aa13.38□□□□□ -0.27
TRAPPC9-215ENST00000524162 HIGD2BQ4VC39 106 aa13.38□□□□□ -0.27
TRAPPC9-215ENST00000524162 LOC389332A0A1B0GUA5 103 aa13.37□□□□□ -0.27
TRAPPC9-215ENST00000524162 RNASE13Q5GAN3 156 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-215ENST00000524162 CYSLTR1Q9Y271 337 aa13.37□□□□□ -0.27
TRAPPC9-215ENST00000524162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-215ENST00000524162 IGHV3OR16-9A0A0B4J2B5 98 aa13.35□□□□□ -0.27
TRAPPC9-215ENST00000524162 ZNF561-AS1K7EIQ3 104 aa13.35□□□□□ -0.27
TRAPPC9-215ENST00000524162 APOMO95445 188 aa13.35□□□□□ -0.27
TRAPPC9-215ENST00000524162 MALP21145 153 aa13.35□□□□□ -0.27
TRAPPC9-215ENST00000524162 RPS10P5Q9NQ39 176 aa13.35□□□□□ -0.27
TRAPPC9-215ENST00000524162 C2orf66Q6UXQ4 117 aa13.34□□□□□ -0.27
TRAPPC9-215ENST00000524162 TMEM141Q96I45 108 aa13.34□□□□□ -0.27
TRAPPC9-215ENST00000524162 DMBT1Q9UGM3 2413 aaPredicted RBP13.33□□□□□ -0.27
TRAPPC9-215ENST00000524162 IGLV4-3A0A075B6K6 122 aa13.33□□□□□ -0.28
TRAPPC9-215ENST00000524162 LINC01549A6NIU2 74 aa13.33□□□□□ -0.28
TRAPPC9-215ENST00000524162 IFITM10A6NMD0 228 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms