RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
PTP4A3-206ENST00000524028 A0A1B0GUT8 65 aa11.75□□□□□ -0.53
PTP4A3-206ENST00000524028 HIGD1CA8MV81 97 aa11.75□□□□□ -0.53
PTP4A3-206ENST00000524028 LINC01551Q86U37 167 aa11.75□□□□□ -0.53
PTP4A3-206ENST00000524028 TSKUQ8WUA8 353 aa11.75□□□□□ -0.53
PTP4A3-206ENST00000524028 MRAP2Q96G30 205 aa11.75□□□□□ -0.53
PTP4A3-206ENST00000524028 IGHV1-58A0A0C4DH39 117 aa11.74□□□□□ -0.53
PTP4A3-206ENST00000524028 MRPL52Q86TS9 123 aaKnown RBP11.74□□□□□ -0.53
PTP4A3-206ENST00000524028 AMN1Q8IY45 258 aa11.74□□□□□ -0.53
PTP4A3-206ENST00000524028 BORCS7Q96B45 105 aa11.74□□□□□ -0.53
PTP4A3-206ENST00000524028 TRBV27A0A0K0K1C4 114 aa11.73□□□□□ -0.53
PTP4A3-206ENST00000524028 TNXBP22105 4242 aa11.73□□□□□ -0.53
PTP4A3-206ENST00000524028 AKAP14Q86UN6 197 aa11.73□□□□□ -0.53
PTP4A3-206ENST00000524028 SMIM7Q9BQ49 75 aa11.73□□□□□ -0.53
PTP4A3-206ENST00000524028 SMKR1H3BMG3 65 aa11.72□□□□□ -0.53
PTP4A3-206ENST00000524028 SS18Q15532 418 aa11.72□□□□□ -0.53
PTP4A3-206ENST00000524028 CD164L2Q6UWJ8 174 aa11.72□□□□□ -0.53
PTP4A3-206ENST00000524028 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
PTP4A3-206ENST00000524028 CARD19Q96LW7 228 aa11.72□□□□□ -0.53
PTP4A3-206ENST00000524028 FAM210AQ96ND0 272 aa11.72□□□□□ -0.53
PTP4A3-206ENST00000524028 EIF5A2Q9GZV4 153 aaKnown RBP11.72□□□□□ -0.53
PTP4A3-206ENST00000524028 LINC01600Q96MT4 127 aa11.71□□□□□ -0.53
PTP4A3-206ENST00000524028 OSTCQ9NRP0 149 aa11.71□□□□□ -0.53
PTP4A3-206ENST00000524028 hCG_2014768A0A024R1R8 64 aa11.7□□□□□ -0.54
PTP4A3-206ENST00000524028 C7orf77A4D0Y5 90 aa11.7□□□□□ -0.54
PTP4A3-206ENST00000524028 SRP19P09132 144 aaKnown RBP11.7□□□□□ -0.54
PTP4A3-206ENST00000524028 ODF1Q14990 250 aa11.7□□□□□ -0.54
PTP4A3-206ENST00000524028 LINC00474Q9P2X8 69 aa11.7□□□□□ -0.54
PTP4A3-206ENST00000524028 V9GYV3 84 aa11.7□□□□□ -0.54
PTP4A3-206ENST00000524028 ZNF727A8MUV8 499 aa11.69□□□□□ -0.54
PTP4A3-206ENST00000524028 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
PTP4A3-206ENST00000524028 ZNF561-AS1K7EIQ3 104 aa11.68□□□□□ -0.54
PTP4A3-206ENST00000524028 VCYO14598 125 aa11.68□□□□□ -0.54
PTP4A3-206ENST00000524028 NRACQ8N912 160 aa11.68□□□□□ -0.54
PTP4A3-206ENST00000524028 NUP35Q8NFH5 326 aa11.68□□□□□ -0.54
PTP4A3-206ENST00000524028 RNASE13Q5GAN3 156 aaKnown RBP11.67□□□□□ -0.54
PTP4A3-206ENST00000524028 UBE2D4Q9Y2X8 147 aa11.67□□□□□ -0.54
PTP4A3-206ENST00000524028 IGLV4-69A0A075B6H9 119 aa11.66□□□□□ -0.54
PTP4A3-206ENST00000524028 FCER1GP30273 86 aa11.66□□□□□ -0.54
PTP4A3-206ENST00000524028 CAMPP49913 170 aa11.66□□□□□ -0.54
PTP4A3-206ENST00000524028 RIGQ13278 110 aa11.66□□□□□ -0.54
PTP4A3-206ENST00000524028 PKIGQ9Y2B9 76 aa11.66□□□□□ -0.54
PTP4A3-206ENST00000524028 CSDC2Q9Y534 153 aaKnown RBP11.66□□□□□ -0.54
PTP4A3-206ENST00000524028 PTTG1IPP53801 180 aa11.65□□□□□ -0.54
PTP4A3-206ENST00000524028 SUMO2P61956 95 aaKnown RBP11.65□□□□□ -0.54
PTP4A3-206ENST00000524028 SRSF9Q13242 221 aaKnown RBP eCLIP11.65□□□□□ -0.54
PTP4A3-206ENST00000524028 SPINK6Q6UWN8 80 aa11.65□□□□□ -0.54
PTP4A3-206ENST00000524028 ISOC2Q96AB3 205 aa11.65□□□□□ -0.54
PTP4A3-206ENST00000524028 LRP2P98164 4655 aa11.65□□□□□ -0.55
PTP4A3-206ENST00000524028 A0A0J9YXV3 536 aa11.64□□□□□ -0.55
PTP4A3-206ENST00000524028 C1orf196B1AJZ1 125 aa11.64□□□□□ -0.55
PTP4A3-206ENST00000524028 COX7A2LO14548 114 aa11.63□□□□□ -0.55
PTP4A3-206ENST00000524028 MALP21145 153 aa11.63□□□□□ -0.55
PTP4A3-206ENST00000524028 KRTAP10-8P60410 259 aa11.63□□□□□ -0.55
PTP4A3-206ENST00000524028 GAGE2BQ13066 116 aa11.63□□□□□ -0.55
PTP4A3-206ENST00000524028 TRAV13-1A0A0B4J241 112 aa11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 LOC107984640A0A0U1RRK4 108 aa11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 A0A1W2PNN7 141 aa11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 PPP1R17O96001 155 aa11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 RPL23P62829 140 aaKnown RBP11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 TMEM241Q24JQ0 296 aa11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 MRPL51Q4U2R6 128 aaKnown RBP11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 Q6ZRP5 223 aa11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 Q6ZUT4 128 aa11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 NAT8BQ9UHF3 227 aa11.62□□□□□ -0.55
PTP4A3-206ENST00000524028 C9JQL5 133 aa11.61□□□□□ -0.55
PTP4A3-206ENST00000524028 FAM104BQ5XKR9 115 aa11.61□□□□□ -0.55
PTP4A3-206ENST00000524028 C5orf38Q86SI9 138 aa11.61□□□□□ -0.55
PTP4A3-206ENST00000524028 KIR2DL4Q99706 377 aa11.61□□□□□ -0.55
PTP4A3-206ENST00000524028 CAMK2N2Q96S95 79 aa11.6□□□□□ -0.55
PTP4A3-206ENST00000524028 SMIM27A0A1W2PRY6 76 aa11.59□□□□□ -0.55
PTP4A3-206ENST00000524028 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.59□□□□□ -0.55
PTP4A3-206ENST00000524028 FAM74A3Q4VXF1 159 aa11.59□□□□□ -0.55
PTP4A3-206ENST00000524028 REG3GQ6UW15 175 aa11.59□□□□□ -0.55
PTP4A3-206ENST00000524028 FAM104AQ969W3 186 aa11.59□□□□□ -0.55
PTP4A3-206ENST00000524028 TIMM21Q9BVV7 248 aa11.59□□□□□ -0.55
PTP4A3-206ENST00000524028 PPP1R2P9O14990 202 aa11.58□□□□□ -0.56
PTP4A3-206ENST00000524028 APOMO95445 188 aa11.58□□□□□ -0.56
PTP4A3-206ENST00000524028 SMAGPQ0VAQ4 97 aa11.58□□□□□ -0.56
PTP4A3-206ENST00000524028 C2orf48Q96LS8 159 aa11.58□□□□□ -0.56
PTP4A3-206ENST00000524028 TRBV24-1A0A075B6N3 115 aa11.57□□□□□ -0.56
PTP4A3-206ENST00000524028 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
PTP4A3-206ENST00000524028 SRSF3P84103 164 aaKnown RBP11.57□□□□□ -0.56
PTP4A3-206ENST00000524028 ADIRFQ15847 76 aa11.57□□□□□ -0.56
PTP4A3-206ENST00000524028 C20orf78Q9BR46 151 aa11.57□□□□□ -0.56
PTP4A3-206ENST00000524028 LINC00862A6NCI5 91 aa11.56□□□□□ -0.56
PTP4A3-206ENST00000524028 C9orf116Q5BN46 136 aaPredicted RBP11.56□□□□□ -0.56
PTP4A3-206ENST00000524028 OPRPNQ99935 248 aaPredicted RBP11.56□□□□□ -0.56
PTP4A3-206ENST00000524028 RNF213Q63HN8 5207 aa11.55□□□□□ -0.56
PTP4A3-206ENST00000524028 TNFRSF6BO95407 300 aa11.55□□□□□ -0.56
PTP4A3-206ENST00000524028 CKS2P33552 79 aa11.55□□□□□ -0.56
PTP4A3-206ENST00000524028 RPL32P62910 135 aaKnown RBP11.55□□□□□ -0.56
PTP4A3-206ENST00000524028 SPAG11BQ08648 103 aa11.55□□□□□ -0.56
PTP4A3-206ENST00000524028 TMEM18Q96B42 140 aa11.55□□□□□ -0.56
PTP4A3-206ENST00000524028 NAT8Q9UHE5 227 aa11.55□□□□□ -0.56
PTP4A3-206ENST00000524028 RPL18AQ02543 176 aaKnown RBP11.54□□□□□ -0.56
PTP4A3-206ENST00000524028 PSORS1C2Q9UIG4 136 aa11.54□□□□□ -0.56
PTP4A3-206ENST00000524028 PHF5AQ7RTV0 110 aaKnown RBP11.53□□□□□ -0.56
PTP4A3-206ENST00000524028 A0A1B0GW15 77 aa11.52□□□□□ -0.57
PTP4A3-206ENST00000524028 D6R8Y8 96 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms