RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 TOMM20LQ6UXN7 152 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 PATE2Q6UY27 113 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 BAGE2Q86Y30 109 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 GPHB5Q86YW7 130 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 SIGLECL1Q8N7X8 197 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 OR4X2Q8NGF9 303 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 SLC50A1Q9BRV3 221 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 OSTCQ9NRP0 149 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 MRPL36Q9P0J6 103 aaKnown RBP1.71□□□□□ -2.14
SKP1-212ENST00000523966 EPDR1Q9UM22 224 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 ZFP30Q9Y2G7 519 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 UFC1Q9Y3C8 167 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 GCN1Q92616 2671 aaKnown RBP1.71□□□□□ -2.14
SKP1-212ENST00000523966 TRAV5A0A0B4J249 113 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 TRBV6-1A0A0K0K1D8 114 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 RBAKDNA6NC62 111 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 C1orf196B1AJZ1 125 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 PPP5D1E7EU14 171 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 ORM1P02763 201 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 TCRAP04437 139 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 PYYP10082 97 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 FBN2P35556 2912 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 ATP5G3P48201 142 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 RAB5BP61020 215 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 UBE2G1P62253 170 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 MRPL51Q4U2R6 128 aaKnown RBP1.7□□□□□ -2.14
SKP1-212ENST00000523966 SPATA31B1PQ5VZV4 182 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 RASL11AQ6T310 242 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.7□□□□□ -2.14
SKP1-212ENST00000523966 TMEM75Q8N9X5 138 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 OR11H1Q8NG94 326 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 MYOZ3Q8TDC0 251 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 SFRP2Q96HF1 295 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 LENEPQ9Y5L5 61 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 MXRA5Q9NR99 2828 aa1.7□□□□□ -2.14
SKP1-212ENST00000523966 TRBV20OR9-2A0A075B6H5 130 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 A0A0J9YX75 114 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 CLPSL1A2RUU4 121 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 GRIFINA4D1Z8 144 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 OVOL1O14753 267 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 MT-ND6P03923 174 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 TYMSP04818 313 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 S100A8P05109 93 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 LGALS1P09382 135 aaKnown RBP1.69□□□□□ -2.14
SKP1-212ENST00000523966 LINC00614P0C842 121 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 IGHV3-30-3P0DP02 117 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 MGST1P10620 155 aaKnown RBP1.69□□□□□ -2.14
SKP1-212ENST00000523966 RPS20P60866 119 aaKnown RBP1.69□□□□□ -2.14
SKP1-212ENST00000523966 SNRPD3P62318 126 aaKnown RBP1.69□□□□□ -2.14
SKP1-212ENST00000523966 SMAGPQ0VAQ4 97 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 ELOBQ15370 118 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 IBA57Q5T440 356 aaKnown RBP1.69□□□□□ -2.14
SKP1-212ENST00000523966 Q6AWC8 147 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 GOLT1AQ6ZVE7 132 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 EXOC3-AS1Q8N2X6 119 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 FAM24BQ8N5W8 94 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 OR4B1Q8NGF8 309 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 TSKUQ8WUA8 353 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 C4orf3Q8WVX3 66 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 DERL1Q9BUN8 251 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 RHPN1-AS1Q9BWJ2 59 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 C16orf95Q9H693 158 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 IL36BQ9NZH7 164 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 SMPXQ9UHP9 88 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 MRPS16Q9Y3D3 137 aaKnown RBP1.69□□□□□ -2.14
SKP1-212ENST00000523966 SOX21Q9Y651 276 aaPredicted RBP1.69□□□□□ -2.14
SKP1-212ENST00000523966 TENM4Q6N022 2769 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 ATRQ13535 2644 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 BAHCC1Q9P281 2608 aa1.69□□□□□ -2.14
SKP1-212ENST00000523966 NF1P21359 2839 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 IGHV3-73A0A0B4J1V6 119 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 TRAV2A0A0B4J234 112 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 SMIM27A0A1W2PRY6 76 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 C2orf70A6NJV1 201 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 FABP5P3A8MUU1 101 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 F2Z2F3 143 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 CD7P09564 240 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 P0DMU3 169 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 FAM231AP0DMU4 169 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 FAM231CP0DMU5 169 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 ESDP10768 282 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 CBLN1P23435 193 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 FOXA3P55318 350 aaPredicted RBP1.68□□□□□ -2.14
SKP1-212ENST00000523966 GNG5P63218 68 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H1AQ02539 215 aaPredicted RBP1.68□□□□□ -2.14
SKP1-212ENST00000523966 TMEM78Q5T7P6 136 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 ATP5L2Q7Z4Y8 100 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 Q86TA4 180 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 BORCS7Q96B45 105 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 ODF3Q96PU9 254 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 GNB1LQ9BYB4 327 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 SPANXB1Q9NS25 103 aaPredicted RBP1.68□□□□□ -2.14
SKP1-212ENST00000523966 NAT8BQ9UHF3 227 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 PSORS1C2Q9UIG4 136 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 V9GYV3 84 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 HIVEP1P15822 2718 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 PDZD2O15018 2839 aa1.68□□□□□ -2.14
SKP1-212ENST00000523966 NSD1Q96L73 2696 aaPredicted RBP1.68□□□□□ -2.14
SKP1-212ENST00000523966 CELSR1Q9NYQ6 3014 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms