RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 TMEM86BQ8N661 226 aa6.62□□□□□ -1.35
CSMD1-212ENST00000523387 DNAJC30Q96LL9 226 aa6.62□□□□□ -1.35
CSMD1-212ENST00000523387 USP9YO00507 2555 aaPredicted RBP6.61□□□□□ -1.35
CSMD1-212ENST00000523387 LECT2O14960 151 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 COX7CP15954 63 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 DEFB136Q30KP8 78 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 C6orf226Q5I0X4 101 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 TMEM243Q9BU79 118 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 ADGRG4Q8IZF6 3080 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 TRGV4A0A0C4DH28 118 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 CFHR3Q02985 330 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 HIST2H2BCQ6DN03 193 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 HIST2H2BDQ6DRA6 164 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 C10orf99Q6UWK7 81 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 HIVEP3Q5T1R4 2406 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 LY6DQ14210 128 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 S100A7L2Q5SY68 101 aa6.61□□□□□ -1.35
CSMD1-212ENST00000523387 B4DSR2 109 aa6.6□□□□□ -1.35
CSMD1-212ENST00000523387 TACC2O95359 2948 aa6.6□□□□□ -1.35
CSMD1-212ENST00000523387 KALRNO60229 2985 aa6.6□□□□□ -1.35
CSMD1-212ENST00000523387 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
CSMD1-212ENST00000523387 SLURP1P55000 103 aa6.59□□□□□ -1.35
CSMD1-212ENST00000523387 C11orf44Q8N8P7 122 aa6.59□□□□□ -1.35
CSMD1-212ENST00000523387 LITAFQ99732 161 aa6.59□□□□□ -1.35
CSMD1-212ENST00000523387 CACNA1AO00555 2505 aa6.59□□□□□ -1.35
CSMD1-212ENST00000523387 A0A1W2PRX2 142 aa6.59□□□□□ -1.35
CSMD1-212ENST00000523387 H0YGX0 51 aa6.59□□□□□ -1.35
CSMD1-212ENST00000523387 DEFB112Q30KQ8 113 aa6.59□□□□□ -1.35
CSMD1-212ENST00000523387 C5orf47Q569G3 176 aa6.59□□□□□ -1.35
CSMD1-212ENST00000523387 USP9XQ93008 2570 aaPredicted RBP6.59□□□□□ -1.36
CSMD1-212ENST00000523387 NCOR2Q9Y618 2525 aa6.59□□□□□ -1.36
CSMD1-212ENST00000523387 LOC400499M0QZD8 3231 aa6.59□□□□□ -1.36
CSMD1-212ENST00000523387 CHCHD7Q9BUK0 85 aa6.59□□□□□ -1.36
CSMD1-212ENST00000523387 C5orf38Q86SI9 138 aa6.58□□□□□ -1.36
CSMD1-212ENST00000523387 A0A1W2PPR1 153 aa6.58□□□□□ -1.36
CSMD1-212ENST00000523387 COX7B2Q8TF08 81 aa6.58□□□□□ -1.36
CSMD1-212ENST00000523387 ORMDL1Q9P0S3 153 aa6.58□□□□□ -1.36
CSMD1-212ENST00000523387 SETD2Q9BYW2 2564 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-212ENST00000523387 CXCL5P42830 114 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 COX6A2Q02221 97 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 MAPK1IP1LQ8NDC0 245 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 UBL5Q9BZL1 73 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 PF4P02776 101 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 SLPIP03973 132 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 RPL18AQ02543 176 aaKnown RBP6.57□□□□□ -1.36
CSMD1-212ENST00000523387 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 CITED2Q99967 270 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-212ENST00000523387 IGHV4-30-2A0A087WSY4 118 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 IGLV1-40P01703 118 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 LRRC75A-AS1Q8N1F1 130 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 Q8N2B8 174 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 Q9UF83 564 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 LAMTOR3Q9UHA4 124 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 DMXL2Q8TDJ6 3036 aa6.57□□□□□ -1.36
CSMD1-212ENST00000523387 NCR3O14931 201 aa6.56□□□□□ -1.36
CSMD1-212ENST00000523387 RBMY1FQ15415 496 aaKnown RBP6.56□□□□□ -1.36
CSMD1-212ENST00000523387 Q6ZSN1 163 aa6.56□□□□□ -1.36
CSMD1-212ENST00000523387 FAM19A5Q7Z5A7 132 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-212ENST00000523387 TLN2Q9Y4G6 2542 aa6.56□□□□□ -1.36
CSMD1-212ENST00000523387 K7EQD1 137 aa6.56□□□□□ -1.36
CSMD1-212ENST00000523387 KLK9Q2XQG4 91 aa6.56□□□□□ -1.36
CSMD1-212ENST00000523387 CSDC2Q9Y534 153 aaKnown RBP6.56□□□□□ -1.36
CSMD1-212ENST00000523387 A0A087WVE0 104 aa6.55□□□□□ -1.36
CSMD1-212ENST00000523387 SMIM9A6NGZ8 99 aa6.55□□□□□ -1.36
CSMD1-212ENST00000523387 GNLYP22749 145 aa6.55□□□□□ -1.36
CSMD1-212ENST00000523387 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
CSMD1-212ENST00000523387 NRGNQ92686 78 aa6.55□□□□□ -1.36
CSMD1-212ENST00000523387 NOP10Q9NPE3 64 aaKnown RBP6.55□□□□□ -1.36
CSMD1-212ENST00000523387 SMIM1B2RUZ4 78 aa6.55□□□□□ -1.36
CSMD1-212ENST00000523387 USP17L23D6RBM5 183 aa6.55□□□□□ -1.36
CSMD1-212ENST00000523387 HAMPP81172 84 aa6.55□□□□□ -1.36
CSMD1-212ENST00000523387 TRAV23DV6A0A075B6W5 121 aa6.54□□□□□ -1.36
CSMD1-212ENST00000523387 GHRHP01286 108 aa6.54□□□□□ -1.36
CSMD1-212ENST00000523387 RPL35AP18077 110 aaKnown RBP6.54□□□□□ -1.36
CSMD1-212ENST00000523387 PSMB8P28062 276 aa6.54□□□□□ -1.36
CSMD1-212ENST00000523387 DEFB121Q5J5C9 76 aa6.54□□□□□ -1.36
CSMD1-212ENST00000523387 C10orf105Q8TEF2 133 aa6.54□□□□□ -1.36
CSMD1-212ENST00000523387 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
CSMD1-212ENST00000523387 DSCR8Q96T75 97 aa6.54□□□□□ -1.36
CSMD1-212ENST00000523387 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
CSMD1-212ENST00000523387 SMIM11BQ8TCY0 68 aa6.53□□□□□ -1.36
CSMD1-212ENST00000523387 TMEM258P61165 79 aa6.53□□□□□ -1.36
CSMD1-212ENST00000523387 RNF152Q8N8N0 203 aa6.53□□□□□ -1.36
CSMD1-212ENST00000523387 SONP18583 2426 aaKnown RBP6.53□□□□□ -1.36
CSMD1-212ENST00000523387 XCL1P47992 114 aa6.53□□□□□ -1.36
CSMD1-212ENST00000523387 CLPSL2Q6UWE3 100 aa6.53□□□□□ -1.36
CSMD1-212ENST00000523387 SOSTDC1Q6X4U4 206 aa6.53□□□□□ -1.36
CSMD1-212ENST00000523387 ZZEF1O43149 2961 aa6.53□□□□□ -1.36
CSMD1-212ENST00000523387 Q6ZTI0 123 aa6.52□□□□□ -1.37
CSMD1-212ENST00000523387 FAM218AQ96MZ4 157 aa6.52□□□□□ -1.37
CSMD1-212ENST00000523387 C20orf197Q8N268 126 aa6.52□□□□□ -1.37
CSMD1-212ENST00000523387 MAP6D1Q9H9H5 199 aa6.52□□□□□ -1.37
CSMD1-212ENST00000523387 CFAP47Q6ZTR5 3102 aa6.51□□□□□ -1.37
CSMD1-212ENST00000523387 A0A087WYN8 130 aa6.51□□□□□ -1.37
CSMD1-212ENST00000523387 TRBV10-1A0A0K0K1A3 114 aa6.51□□□□□ -1.37
CSMD1-212ENST00000523387 DEFB130BP0DP73 79 aa6.51□□□□□ -1.37
CSMD1-212ENST00000523387 DEFB130AP0DP74 79 aa6.51□□□□□ -1.37
CSMD1-212ENST00000523387 SS18Q15532 418 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms