RNA–Protein interactions for RNA: ENST00000523270.1

CNOT8-223, Transcript of CCR4-NOT transcription complex subunit 8, human

TSL 4

Gene CNOT8, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT8-223	ENST00000523270	C15orf56	Q8N910	161 aa		13.27	□□□□□ -0.29
CNOT8-223	ENST00000523270	TMEM101	Q96IK0	257 aa		13.27	□□□□□ -0.29
CNOT8-223	ENST00000523270	BTF3L4	Q96K17	158 aa		13.27	□□□□□ -0.29
CNOT8-223	ENST00000523270	C20orf78	Q9BR46	151 aa		13.27	□□□□□ -0.29
CNOT8-223	ENST00000523270	TMEM218	A2RU14	115 aa		13.26	□□□□□ -0.29
CNOT8-223	ENST00000523270	RPL32	P62910	135 aa	Known RBP	13.26	□□□□□ -0.29
CNOT8-223	ENST00000523270	UQCC3	Q6UW78	93 aa		13.26	□□□□□ -0.29
CNOT8-223	ENST00000523270	SCX	Q7RTU7	201 aa		13.26	□□□□□ -0.29
CNOT8-223	ENST00000523270	KIR2DL4	Q99706	377 aa		13.26	□□□□□ -0.29
CNOT8-223	ENST00000523270	SMIM2	Q9BVW6	85 aa		13.26	□□□□□ -0.29
CNOT8-223	ENST00000523270	CDC42SE2	Q9NRR3	84 aa		13.26	□□□□□ -0.29
CNOT8-223	ENST00000523270	hDV102S1	A0JD36	115 aa		13.25	□□□□□ -0.29
CNOT8-223	ENST00000523270	SLPI	P03973	132 aa		13.25	□□□□□ -0.29
CNOT8-223	ENST00000523270	LINC00959	A0A1B0GUT2	108 aa		13.24	□□□□□ -0.29
CNOT8-223	ENST00000523270	FOXI1	Q12951	378 aa		13.24	□□□□□ -0.29
CNOT8-223	ENST00000523270	RNASE13	Q5GAN3	156 aa	Known RBP	13.24	□□□□□ -0.29
CNOT8-223	ENST00000523270	DGAT2L7P	Q6IED9	249 aa		13.24	□□□□□ -0.29
CNOT8-223	ENST00000523270	COMMD7	Q86VX2	200 aa		13.24	□□□□□ -0.29
CNOT8-223	ENST00000523270	C9orf163	Q8N9P6	203 aa		13.24	□□□□□ -0.29
CNOT8-223	ENST00000523270	CLRN3	Q8NCR9	226 aa		13.24	□□□□□ -0.29
CNOT8-223	ENST00000523270	UBE2D4	Q9Y2X8	147 aa		13.24	□□□□□ -0.29
CNOT8-223	ENST00000523270	ZNF664	Q8N3J9	261 aa		13.23	□□□□□ -0.29
CNOT8-223	ENST00000523270	CCL25	O15444	150 aa		13.22	□□□□□ -0.29
CNOT8-223	ENST00000523270	XCL1	P47992	114 aa		13.22	□□□□□ -0.29
CNOT8-223	ENST00000523270	CNBP	P62633	177 aa	Known RBP	13.22	□□□□□ -0.29
CNOT8-223	ENST00000523270	RPL39	P62891	51 aa	Known RBP	13.22	□□□□□ -0.29
CNOT8-223	ENST00000523270	TMEM136	Q6ZRR5	245 aa		13.22	□□□□□ -0.29
CNOT8-223	ENST00000523270	ORMDL3	Q8N138	153 aa		13.22	□□□□□ -0.29
CNOT8-223	ENST00000523270	PRELID3A	Q96N28	172 aa		13.22	□□□□□ -0.29
CNOT8-223	ENST00000523270	PHOX2A	O14813	284 aa		13.21	□□□□□ -0.29
CNOT8-223	ENST00000523270	TCAP	O15273	167 aa		13.21	□□□□□ -0.29
CNOT8-223	ENST00000523270	PPBP	P02775	128 aa		13.21	□□□□□ -0.29
CNOT8-223	ENST00000523270	HIGD2B	Q4VC39	106 aa		13.21	□□□□□ -0.29
CNOT8-223	ENST00000523270		Q6ZUT4	128 aa		13.21	□□□□□ -0.29
CNOT8-223	ENST00000523270	CHAC1	Q9BUX1	264 aa		13.21	□□□□□ -0.29
CNOT8-223	ENST00000523270	SRRM2	Q9UQ35	2752 aa	Known RBP	13.21	□□□□□ -0.29
CNOT8-223	ENST00000523270	PANO1	I0J062	215 aa		13.2	□□□□□ -0.3
CNOT8-223	ENST00000523270	CIRBP-AS1	Q8TBR5	109 aa		13.2	□□□□□ -0.3
CNOT8-223	ENST00000523270	FAM104A	Q969W3	186 aa		13.2	□□□□□ -0.3
CNOT8-223	ENST00000523270	CSDC2	Q9Y534	153 aa	Known RBP	13.19	□□□□□ -0.3
CNOT8-223	ENST00000523270	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.19	□□□□□ -0.3
CNOT8-223	ENST00000523270	SDIM1	Q6ZPB5	146 aa		13.18	□□□□□ -0.3
CNOT8-223	ENST00000523270	LINC00528	Q8N1L1	170 aa		13.18	□□□□□ -0.3
CNOT8-223	ENST00000523270	SEC11C	Q9BY50	192 aa		13.18	□□□□□ -0.3
CNOT8-223	ENST00000523270	FAM229A	H3BQW9	127 aa		13.17	□□□□□ -0.3
CNOT8-223	ENST00000523270	OPRPN	Q99935	248 aa	Predicted RBP	13.17	□□□□□ -0.3
CNOT8-223	ENST00000523270	TIMM21	Q9BVV7	248 aa		13.17	□□□□□ -0.3
CNOT8-223	ENST00000523270	AP5S1	Q9NUS5	200 aa		13.17	□□□□□ -0.3
CNOT8-223	ENST00000523270	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.16	□□□□□ -0.3
CNOT8-223	ENST00000523270	INAFM2	P0DMQ5	153 aa		13.16	□□□□□ -0.3
CNOT8-223	ENST00000523270	SS18	Q15532	418 aa		13.16	□□□□□ -0.3
CNOT8-223	ENST00000523270	CFAP161	Q6P656	301 aa		13.16	□□□□□ -0.3
CNOT8-223	ENST00000523270	IMMP2L	Q96T52	175 aa		13.16	□□□□□ -0.3
CNOT8-223	ENST00000523270	FLG2	Q5D862	2391 aa	Predicted RBP	13.16	□□□□□ -0.3
CNOT8-223	ENST00000523270	LOC389332	A0A1B0GUA5	103 aa		13.15	□□□□□ -0.3
CNOT8-223	ENST00000523270	CD164L2	Q6UWJ8	174 aa		13.15	□□□□□ -0.3
CNOT8-223	ENST00000523270	TMEM18	Q96B42	140 aa		13.15	□□□□□ -0.3
CNOT8-223	ENST00000523270	CTDSP1	Q9GZU7	261 aa		13.15	□□□□□ -0.3
CNOT8-223	ENST00000523270	TRAV13-1	A0A0B4J241	112 aa		13.14	□□□□□ -0.31
CNOT8-223	ENST00000523270	C10orf91	Q5T1B1	145 aa		13.14	□□□□□ -0.31
CNOT8-223	ENST00000523270	LINC00526	Q96FQ7	95 aa		13.14	□□□□□ -0.31
CNOT8-223	ENST00000523270	PRSS47	A8MTI9	375 aa		13.13	□□□□□ -0.31
CNOT8-223	ENST00000523270	SMAGP	Q0VAQ4	97 aa		13.13	□□□□□ -0.31
CNOT8-223	ENST00000523270	MYCBP2	O75592	4640 aa		13.12	□□□□□ -0.31
CNOT8-223	ENST00000523270	IGHV3-64	A0A075B6Q5	118 aa		13.12	□□□□□ -0.31
CNOT8-223	ENST00000523270	CHTF8	P0CG12	524 aa		13.12	□□□□□ -0.31
CNOT8-223	ENST00000523270	MAP1LC3A	Q9H492	121 aa		13.12	□□□□□ -0.31
CNOT8-223	ENST00000523270	SPANXA1	Q9NS26	97 aa		13.12	□□□□□ -0.31
CNOT8-223	ENST00000523270	LAMTOR2	Q9Y2Q5	125 aa		13.12	□□□□□ -0.31
CNOT8-223	ENST00000523270	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.11	□□□□□ -0.31
CNOT8-223	ENST00000523270	IGHV1-58	A0A0C4DH39	117 aa		13.11	□□□□□ -0.31
CNOT8-223	ENST00000523270	C1orf196	B1AJZ1	125 aa		13.11	□□□□□ -0.31
CNOT8-223	ENST00000523270	KIAA1644	Q3SXP7	199 aa		13.11	□□□□□ -0.31
CNOT8-223	ENST00000523270	RAB5A	P20339	215 aa		13.1	□□□□□ -0.31
CNOT8-223	ENST00000523270	KRTAP10-4	P60372	401 aa	Predicted RBP	13.1	□□□□□ -0.31
CNOT8-223	ENST00000523270	CIRBP	Q14011	172 aa	Known RBP	13.1	□□□□□ -0.31
CNOT8-223	ENST00000523270	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.1	□□□□□ -0.31
CNOT8-223	ENST00000523270		Q8N8P6	123 aa		13.09	□□□□□ -0.31
CNOT8-223	ENST00000523270	PKHD1L1	Q86WI1	4243 aa		13.08	□□□□□ -0.32
CNOT8-223	ENST00000523270	TRAV9-1	A0A075B6T8	112 aa		13.08	□□□□□ -0.32
CNOT8-223	ENST00000523270	MRPS36	P82909	103 aa	Known RBP	13.08	□□□□□ -0.32
CNOT8-223	ENST00000523270	PRSS3P2	Q8NHM4	247 aa		13.08	□□□□□ -0.32
CNOT8-223	ENST00000523270	COX7A2L	O14548	114 aa		13.07	□□□□□ -0.32
CNOT8-223	ENST00000523270	COX6A2	Q02221	97 aa		13.07	□□□□□ -0.32
CNOT8-223	ENST00000523270	C5orf38	Q86SI9	138 aa		13.07	□□□□□ -0.32
CNOT8-223	ENST00000523270	PLA2G1B	P04054	148 aa	Known RBP	13.06	□□□□□ -0.32
CNOT8-223	ENST00000523270	SPACA4	Q8TDM5	124 aa		13.06	□□□□□ -0.32
CNOT8-223	ENST00000523270	IGLV4-3	A0A075B6K6	122 aa		13.05	□□□□□ -0.32
CNOT8-223	ENST00000523270	IFI27	P40305	119 aa	Predicted RBP	13.05	□□□□□ -0.32
CNOT8-223	ENST00000523270	RPS10P5	Q9NQ39	176 aa		13.05	□□□□□ -0.32
CNOT8-223	ENST00000523270	IFITM10	A6NMD0	228 aa		13.04	□□□□□ -0.32
CNOT8-223	ENST00000523270	MAL	P21145	153 aa		13.04	□□□□□ -0.32
CNOT8-223	ENST00000523270	S100P	P25815	95 aa		13.04	□□□□□ -0.32
CNOT8-223	ENST00000523270	RHEB	Q15382	184 aa		13.04	□□□□□ -0.32
CNOT8-223	ENST00000523270	C2orf66	Q6UXQ4	117 aa		13.04	□□□□□ -0.32
CNOT8-223	ENST00000523270	PYGO1	Q9Y3Y4	419 aa		13.04	□□□□□ -0.32
CNOT8-223	ENST00000523270	IGLV4-69	A0A075B6H9	119 aa		13.03	□□□□□ -0.32
CNOT8-223	ENST00000523270	ZC2HC1B	Q5TFG8	222 aa		13.03	□□□□□ -0.32
CNOT8-223	ENST00000523270	CARD19	Q96LW7	228 aa		13.03	□□□□□ -0.32
CNOT8-223	ENST00000523270		A0A087WYN8	130 aa		13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms