RNA–Protein interactions for RNA: ENST00000523147.5

PTP4A3-205, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5

Gene PTP4A3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-205ENST00000523147 C15orf56Q8N910 161 aa13.46□□□□□ -0.25
PTP4A3-205ENST00000523147 HERC1Q15751 4861 aa13.46□□□□□ -0.26
PTP4A3-205ENST00000523147 SMIM27A0A1W2PRY6 76 aa13.45□□□□□ -0.26
PTP4A3-205ENST00000523147 SLPIP03973 132 aa13.45□□□□□ -0.26
PTP4A3-205ENST00000523147 XCL1P47992 114 aa13.45□□□□□ -0.26
PTP4A3-205ENST00000523147 RPL37AP61513 92 aaKnown RBP13.45□□□□□ -0.26
PTP4A3-205ENST00000523147 SUMO2P61956 95 aaKnown RBP13.45□□□□□ -0.26
PTP4A3-205ENST00000523147 KIR2DL4Q99706 377 aa13.45□□□□□ -0.26
PTP4A3-205ENST00000523147 A0A1B0GW15 77 aa13.44□□□□□ -0.26
PTP4A3-205ENST00000523147 SS18Q15532 418 aa13.44□□□□□ -0.26
PTP4A3-205ENST00000523147 LINC00959A0A1B0GUT2 108 aa13.43□□□□□ -0.26
PTP4A3-205ENST00000523147 PANO1I0J062 215 aa13.43□□□□□ -0.26
PTP4A3-205ENST00000523147 PPP1R2P9O14990 202 aa13.43□□□□□ -0.26
PTP4A3-205ENST00000523147 CCL25O15444 150 aa13.43□□□□□ -0.26
PTP4A3-205ENST00000523147 SMAGPQ0VAQ4 97 aa13.43□□□□□ -0.26
PTP4A3-205ENST00000523147 MRPL51Q4U2R6 128 aaKnown RBP13.43□□□□□ -0.26
PTP4A3-205ENST00000523147 FAM104BQ5XKR9 115 aa13.43□□□□□ -0.26
PTP4A3-205ENST00000523147 MRPL52Q86TS9 123 aaKnown RBP13.43□□□□□ -0.26
PTP4A3-205ENST00000523147 NRACQ8N912 160 aa13.43□□□□□ -0.26
PTP4A3-205ENST00000523147 FOXI1Q12951 378 aa13.42□□□□□ -0.26
PTP4A3-205ENST00000523147 ZNF664Q8N3J9 261 aa13.42□□□□□ -0.26
PTP4A3-205ENST00000523147 CDC42SE2Q9NRR3 84 aa13.42□□□□□ -0.26
PTP4A3-205ENST00000523147 LINC00862A6NCI5 91 aa13.41□□□□□ -0.26
PTP4A3-205ENST00000523147 S100A8P05109 93 aa13.41□□□□□ -0.26
PTP4A3-205ENST00000523147 CKS2P33552 79 aa13.41□□□□□ -0.26
PTP4A3-205ENST00000523147 GVQW2A0A096LPI5 108 aaPredicted RBP13.4□□□□□ -0.26
PTP4A3-205ENST00000523147 F8W036 122 aa13.4□□□□□ -0.26
PTP4A3-205ENST00000523147 KRTAP10-4P60372 401 aaPredicted RBP13.4□□□□□ -0.26
PTP4A3-205ENST00000523147 KRTAP29-1A8MX34 341 aaPredicted RBP13.39□□□□□ -0.27
PTP4A3-205ENST00000523147 CHTF8P0CG12 524 aa13.39□□□□□ -0.27
PTP4A3-205ENST00000523147 MRPL54Q6P161 138 aaKnown RBP13.39□□□□□ -0.27
PTP4A3-205ENST00000523147 TMEM18Q96B42 140 aa13.39□□□□□ -0.27
PTP4A3-205ENST00000523147 IGHV1-58A0A0C4DH39 117 aa13.38□□□□□ -0.27
PTP4A3-205ENST00000523147 HBBP68871 147 aa13.38□□□□□ -0.27
PTP4A3-205ENST00000523147 COX6A2Q02221 97 aa13.38□□□□□ -0.27
PTP4A3-205ENST00000523147 CIRBPQ14011 172 aaKnown RBP13.38□□□□□ -0.27
PTP4A3-205ENST00000523147 C20orf78Q9BR46 151 aa13.38□□□□□ -0.27
PTP4A3-205ENST00000523147 RAB14P61106 215 aa13.37□□□□□ -0.27
PTP4A3-205ENST00000523147 CD164L2Q6UWJ8 174 aa13.37□□□□□ -0.27
PTP4A3-205ENST00000523147 A0A087WYN8 130 aa13.36□□□□□ -0.27
PTP4A3-205ENST00000523147 SPACA4Q8TDM5 124 aa13.36□□□□□ -0.27
PTP4A3-205ENST00000523147 UBE2D4Q9Y2X8 147 aa13.36□□□□□ -0.27
PTP4A3-205ENST00000523147 CSDC2Q9Y534 153 aaKnown RBP13.36□□□□□ -0.27
PTP4A3-205ENST00000523147 TRBV24-1A0A075B6N3 115 aa13.35□□□□□ -0.27
PTP4A3-205ENST00000523147 C1orf196B1AJZ1 125 aa13.35□□□□□ -0.27
PTP4A3-205ENST00000523147 TCAPO15273 167 aa13.35□□□□□ -0.27
PTP4A3-205ENST00000523147 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
PTP4A3-205ENST00000523147 IGKV2-24A0A0C4DH68 120 aa13.34□□□□□ -0.27
PTP4A3-205ENST00000523147 D6R8Y8 96 aa13.34□□□□□ -0.27
PTP4A3-205ENST00000523147 ZNF561-AS1K7EIQ3 104 aa13.34□□□□□ -0.27
PTP4A3-205ENST00000523147 MALP21145 153 aa13.34□□□□□ -0.27
PTP4A3-205ENST00000523147 PRSS3P2Q8NHM4 247 aa13.34□□□□□ -0.27
PTP4A3-205ENST00000523147 MAJINQ3KP22 176 aa13.33□□□□□ -0.28
PTP4A3-205ENST00000523147 RNASE13Q5GAN3 156 aaKnown RBP13.33□□□□□ -0.28
PTP4A3-205ENST00000523147 PKIGQ9Y2B9 76 aa13.33□□□□□ -0.28
PTP4A3-205ENST00000523147 TRAV13-1A0A0B4J241 112 aa13.32□□□□□ -0.28
PTP4A3-205ENST00000523147 PPBPP02775 128 aa13.32□□□□□ -0.28
PTP4A3-205ENST00000523147 RPL32P62910 135 aaKnown RBP13.32□□□□□ -0.28
PTP4A3-205ENST00000523147 LINC00526Q96FQ7 95 aa13.32□□□□□ -0.28
PTP4A3-205ENST00000523147 A0A1B0GXF2 115 aa13.31□□□□□ -0.28
PTP4A3-205ENST00000523147 COX7A2LO14548 114 aa13.31□□□□□ -0.28
PTP4A3-205ENST00000523147 OXTP01178 125 aa13.31□□□□□ -0.28
PTP4A3-205ENST00000523147 CARD19Q96LW7 228 aa13.31□□□□□ -0.28
PTP4A3-205ENST00000523147 SMIM2Q9BVW6 85 aa13.31□□□□□ -0.28
PTP4A3-205ENST00000523147 ATP5L2Q7Z4Y8 100 aa13.3□□□□□ -0.28
PTP4A3-205ENST00000523147 C7orf33Q8WU49 177 aa13.3□□□□□ -0.28
PTP4A3-205ENST00000523147 TIMM21Q9BVV7 248 aa13.3□□□□□ -0.28
PTP4A3-205ENST00000523147 PLAC8Q9NZF1 115 aa13.3□□□□□ -0.28
PTP4A3-205ENST00000523147 PNRC1Q12796 327 aaPredicted RBP13.29□□□□□ -0.28
PTP4A3-205ENST00000523147 Q6ZUT4 128 aa13.29□□□□□ -0.28
PTP4A3-205ENST00000523147 ORMDL3Q8N138 153 aa13.29□□□□□ -0.28
PTP4A3-205ENST00000523147 PHOX2AO14813 284 aa13.28□□□□□ -0.28
PTP4A3-205ENST00000523147 NPYP01303 97 aa13.28□□□□□ -0.28
PTP4A3-205ENST00000523147 SYCNQ0VAF6 134 aa13.28□□□□□ -0.28
PTP4A3-205ENST00000523147 TMEM136Q6ZRR5 245 aa13.28□□□□□ -0.28
PTP4A3-205ENST00000523147 STPG4Q8N801 248 aa13.28□□□□□ -0.28
PTP4A3-205ENST00000523147 LINC00474Q9P2X8 69 aa13.28□□□□□ -0.28
PTP4A3-205ENST00000523147 MT-ND4LP03901 98 aa13.27□□□□□ -0.29
PTP4A3-205ENST00000523147 RAB5AP20339 215 aa13.27□□□□□ -0.29
PTP4A3-205ENST00000523147 RPL39P62891 51 aaKnown RBP13.27□□□□□ -0.29
PTP4A3-205ENST00000523147 A0A096LNI7 61 aa13.26□□□□□ -0.29
PTP4A3-205ENST00000523147 APOMO95445 188 aa13.26□□□□□ -0.29
PTP4A3-205ENST00000523147 HNRNPA3P51991 378 aaKnown RBP13.26□□□□□ -0.29
PTP4A3-205ENST00000523147 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
PTP4A3-205ENST00000523147 PRELID3AQ96N28 172 aa13.26□□□□□ -0.29
PTP4A3-205ENST00000523147 SPANXA1Q9NS26 97 aa13.26□□□□□ -0.29
PTP4A3-205ENST00000523147 IGLV4-69A0A075B6H9 119 aa13.25□□□□□ -0.29
PTP4A3-205ENST00000523147 C5orf38Q86SI9 138 aa13.25□□□□□ -0.29
PTP4A3-205ENST00000523147 CAMK2N2Q96S95 79 aa13.23□□□□□ -0.29
PTP4A3-205ENST00000523147 LRP1Q07954 4544 aaKnown RBP13.22□□□□□ -0.29
PTP4A3-205ENST00000523147 IFI27P40305 119 aaPredicted RBP13.21□□□□□ -0.29
PTP4A3-205ENST00000523147 OPRPNQ99935 248 aaPredicted RBP13.21□□□□□ -0.29
PTP4A3-205ENST00000523147 LOC389332A0A1B0GUA5 103 aa13.2□□□□□ -0.3
PTP4A3-205ENST00000523147 IFITM10A6NMD0 228 aa13.2□□□□□ -0.3
PTP4A3-205ENST00000523147 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
PTP4A3-205ENST00000523147 Q6ZRU5 148 aa13.2□□□□□ -0.3
PTP4A3-205ENST00000523147 MAP1LC3AQ9H492 121 aa13.2□□□□□ -0.3
PTP4A3-205ENST00000523147 LOC107984640A0A0U1RRK4 108 aa13.19□□□□□ -0.3
PTP4A3-205ENST00000523147 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
PTP4A3-205ENST00000523147 GAGE2BQ13066 116 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms