RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 SMIM4Q8WVI0 70 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 MAFIPQ8WZ33 124 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 TPT1P8Q9HAU6 139 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 NPVFQ9HCQ7 196 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 CCDC167Q9P0B6 97 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 HIVEP1P15822 2718 aa-0.47□□□□□ -2.49
PCM1-217ENST00000522998 MYOM3Q5VTT5 1437 aa-0.47□□□□□ -2.49
PCM1-217ENST00000522998 SBF2Q86WG5 1849 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 MRC1P22897 1456 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 TRAV13-2A0A0B4J235 113 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 I3L2K1 104 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 AGPAT4-IT1Q9H0P7 198 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 LENEPQ9Y5L5 61 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 TSC2P49815 1807 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 MYH7P12883 1935 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 GRIN2AQ12879 1464 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 BCL9LQ86UU0 1499 aa-0.48□□□□□ -2.49
PCM1-217ENST00000522998 FLGP20930 4061 aaPredicted RBP-0.49□□□□□ -2.49
PCM1-217ENST00000522998 K7EQZ3 153 aa-0.49□□□□□ -2.49
PCM1-217ENST00000522998 TP53AIP1Q9HCN2 124 aa-0.49□□□□□ -2.49
PCM1-217ENST00000522998 C10orf71Q711Q0 1435 aa-0.49□□□□□ -2.49
PCM1-217ENST00000522998 CNOT1A5YKK6 2376 aaKnown RBP-0.49□□□□□ -2.49
PCM1-217ENST00000522998 ARAP2Q8WZ64 1704 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 FAT1Q14517 4588 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 LOC730098B7Z3J9 87 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 S100A3P33764 101 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 C10orf128Q5T292 105 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 Q8N8P6 123 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 AQP10Q96PS8 301 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 AMELXQ99217 191 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 LINC00472Q9H8W2 130 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 HECTD1Q9ULT8 2610 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 ERCC6L2Q5T890 1561 aa-0.5□□□□□ -2.49
PCM1-217ENST00000522998 FXYD6-FXYD2A0A087WZ82 144 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 PIGBOS1A0A0B4J2F0 54 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 CTXND1A0A1B0GTU2 59 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 USP9YO00507 2555 aaPredicted RBP-0.51□□□□□ -2.49
PCM1-217ENST00000522998 CFTRP13569 1480 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 HIST1H1DP16402 221 aaKnown RBP-0.51□□□□□ -2.49
PCM1-217ENST00000522998 MT4P47944 62 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 RBM3P98179 157 aaKnown RBP-0.51□□□□□ -2.49
PCM1-217ENST00000522998 KRTAP6-2Q3LI66 62 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 C12orf73Q69YU5 71 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 SPAG11AQ6PDA7 123 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 PFDN5Q99471 154 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 PAIP2BQ9ULR5 123 aaKnown RBP-0.51□□□□□ -2.49
PCM1-217ENST00000522998 EPG5Q9HCE0 2579 aa-0.51□□□□□ -2.49
PCM1-217ENST00000522998 PSME4Q14997 1843 aa-0.52□□□□□ -2.49
PCM1-217ENST00000522998 UBR4Q5T4S7 5183 aa-0.52□□□□□ -2.49
PCM1-217ENST00000522998 PPIP5K1Q6PFW1 1433 aa-0.52□□□□□ -2.49
PCM1-217ENST00000522998 DCDP81605 110 aaKnown RBP-0.52□□□□□ -2.49
PCM1-217ENST00000522998 TTC9CQ8N5M4 171 aa-0.52□□□□□ -2.49
PCM1-217ENST00000522998 COPS9Q8WXC6 57 aa-0.52□□□□□ -2.49
PCM1-217ENST00000522998 LSM10Q969L4 123 aaKnown RBP-0.52□□□□□ -2.49
PCM1-217ENST00000522998 ZFHX3Q15911 3703 aa-0.52□□□□□ -2.49
PCM1-217ENST00000522998 STARD9Q9P2P6 4700 aa-0.52□□□□□ -2.49
PCM1-217ENST00000522998 KIF21AQ7Z4S6 1674 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 PAPPAQ13219 1627 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 ITPR3Q14573 2671 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 ARPC4P59998 168 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 COX17Q14061 63 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 Q6AWC8 147 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 PDCD10Q9BUL8 212 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 SNRNP25Q9BV90 132 aaKnown RBP-0.53□□□□□ -2.49
PCM1-217ENST00000522998 RERGLQ9H628 205 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 V9GYH0 126 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 HTTP42858 3142 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 FOCADQ5VW36 1801 aa-0.53□□□□□ -2.49
PCM1-217ENST00000522998 EPPK1P58107 5090 aaKnown RBP-0.54□□□□□ -2.5
PCM1-217ENST00000522998 TRBV6-1A0A0K0K1D8 114 aa-0.54□□□□□ -2.5
PCM1-217ENST00000522998 PIGYQ3MUY2 71 aa-0.54□□□□□ -2.5
PCM1-217ENST00000522998 TMEM170BQ5T4T1 132 aa-0.54□□□□□ -2.5
PCM1-217ENST00000522998 BAGE2Q86Y30 109 aa-0.54□□□□□ -2.5
PCM1-217ENST00000522998 FXYD6Q9H0Q3 95 aa-0.54□□□□□ -2.5
PCM1-217ENST00000522998 SERP1Q9Y6X1 66 aa-0.54□□□□□ -2.5
PCM1-217ENST00000522998 KDM5AP29375 1690 aaKnown RBP-0.54□□□□□ -2.5
PCM1-217ENST00000522998 NEBP20929 6669 aa-0.54□□□□□ -2.5
PCM1-217ENST00000522998 TCHHQ07283 1943 aa-0.54□□□□□ -2.5
PCM1-217ENST00000522998 PKHD1P08F94 4074 aa-0.55□□□□□ -2.5
PCM1-217ENST00000522998 RIMS1Q86UR5 1692 aaKnown RBP-0.55□□□□□ -2.5
PCM1-217ENST00000522998 TACC2O95359 2948 aa-0.55□□□□□ -2.5
PCM1-217ENST00000522998 UQCR11O14957 56 aa-0.55□□□□□ -2.5
PCM1-217ENST00000522998 SELENOWP63302 87 aa-0.55□□□□□ -2.5
PCM1-217ENST00000522998 Q6JHZ5 121 aa-0.55□□□□□ -2.5
PCM1-217ENST00000522998 NDUFA4L2Q9NRX3 87 aa-0.55□□□□□ -2.5
PCM1-217ENST00000522998 BICRAQ9NZM4 1560 aa-0.55□□□□□ -2.5
PCM1-217ENST00000522998 PCNX1Q96RV3 2341 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 F8VRH5 84 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 M0R2T5 61 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 SPRR1BP22528 89 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 SPRR2EP22531 72 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 SPRR2AP35326 72 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 TPPP2P59282 170 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 KLK9Q2XQG4 91 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 MGST2Q99735 147 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 LINC01558Q9Y6Z2 57 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 PHLPP1O60346 1717 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 IQSEC2Q5JU85 1478 aa-0.56□□□□□ -2.5
PCM1-217ENST00000522998 SPTBN4Q9H254 2564 aa-0.57□□□□□ -2.5
PCM1-217ENST00000522998 TRBV7-3A0A075B6L6 115 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms