RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 RPL23P62829 140 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 ADIRFQ15847 76 aa9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 AMMECR1LQ6DCA0 310 aa9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 RNASEKQ6P5S7 137 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 CNFNQ9BYD5 112 aa9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 BIN3Q9NQY0 253 aa9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 XKRY2A2RUG3 117 aa9.43□□□□□ -0.9
TRAPPC9-213ENST00000522504 XCL1P47992 114 aa9.43□□□□□ -0.9
TRAPPC9-213ENST00000522504 TWIST1Q15672 202 aa9.43□□□□□ -0.9
TRAPPC9-213ENST00000522504 SEC11CQ9BY50 192 aa9.43□□□□□ -0.9
TRAPPC9-213ENST00000522504 NUDT10Q8NFP7 164 aa9.42□□□□□ -0.9
TRAPPC9-213ENST00000522504 NUDT11Q96G61 164 aa9.42□□□□□ -0.9
TRAPPC9-213ENST00000522504 MUC2Q02817 5179 aa9.42□□□□□ -0.9
TRAPPC9-213ENST00000522504 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
TRAPPC9-213ENST00000522504 Q6ZRP5 223 aa9.41□□□□□ -0.9
TRAPPC9-213ENST00000522504 ISOC2Q96AB3 205 aa9.41□□□□□ -0.9
TRAPPC9-213ENST00000522504 RNASE7Q9H1E1 156 aaKnown RBP9.41□□□□□ -0.9
TRAPPC9-213ENST00000522504 LINC00474Q9P2X8 69 aa9.41□□□□□ -0.9
TRAPPC9-213ENST00000522504 LINC00959A0A1B0GUT2 108 aa9.4□□□□□ -0.9
TRAPPC9-213ENST00000522504 CCL25O15444 150 aa9.4□□□□□ -0.9
TRAPPC9-213ENST00000522504 NCR2O95944 276 aa9.4□□□□□ -0.9
TRAPPC9-213ENST00000522504 APCSP02743 223 aa9.4□□□□□ -0.9
TRAPPC9-213ENST00000522504 PNRC1Q12796 327 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC9-213ENST00000522504 OR5A1Q8NGJ0 315 aa9.4□□□□□ -0.9
TRAPPC9-213ENST00000522504 CARD19Q96LW7 228 aa9.4□□□□□ -0.9
TRAPPC9-213ENST00000522504 IGHV1-58A0A0C4DH39 117 aa9.39□□□□□ -0.91
TRAPPC9-213ENST00000522504 SDHAF1A6NFY7 115 aa9.39□□□□□ -0.91
TRAPPC9-213ENST00000522504 H7C423 109 aa9.39□□□□□ -0.91
TRAPPC9-213ENST00000522504 C10orf91Q5T1B1 145 aa9.39□□□□□ -0.91
TRAPPC9-213ENST00000522504 FAM231DQ6ZW35 169 aa9.39□□□□□ -0.91
TRAPPC9-213ENST00000522504 CARHSP1Q9Y2V2 147 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-213ENST00000522504 A0A1W2PNN7 141 aa9.38□□□□□ -0.91
TRAPPC9-213ENST00000522504 GATCO43716 136 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-213ENST00000522504 APOC3P02656 99 aa9.38□□□□□ -0.91
TRAPPC9-213ENST00000522504 PTTG1IPP53801 180 aa9.38□□□□□ -0.91
TRAPPC9-213ENST00000522504 RPP21Q9H633 154 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-213ENST00000522504 ZNF25P17030 456 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC9-213ENST00000522504 SYCNQ0VAF6 134 aa9.37□□□□□ -0.91
TRAPPC9-213ENST00000522504 OSTCQ9NRP0 149 aa9.37□□□□□ -0.91
TRAPPC9-213ENST00000522504 TSHBP01222 138 aa9.36□□□□□ -0.91
TRAPPC9-213ENST00000522504 ESDP10768 282 aa9.36□□□□□ -0.91
TRAPPC9-213ENST00000522504 I3L3M4 83 aa9.35□□□□□ -0.91
TRAPPC9-213ENST00000522504 GAGE2BQ13066 116 aa9.35□□□□□ -0.91
TRAPPC9-213ENST00000522504 TMEM242Q9NWH2 141 aa9.35□□□□□ -0.91
TRAPPC9-213ENST00000522504 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 PPP1R2P9O14990 202 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 MT-ND4LP03901 98 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 PMCHP20382 165 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 CD164L2Q6UWJ8 174 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 SVBPQ8N300 66 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 TMEM101Q96IK0 257 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 BTF3L4Q96K17 158 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 CDC42SE2Q9NRR3 84 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 V9GYV3 84 aa9.34□□□□□ -0.91
TRAPPC9-213ENST00000522504 IGLV4-69A0A075B6H9 119 aa9.33□□□□□ -0.92
TRAPPC9-213ENST00000522504 TRBV6-5A0A0K0K1A5 114 aa9.33□□□□□ -0.92
TRAPPC9-213ENST00000522504 SNAPINO95295 136 aa9.33□□□□□ -0.92
TRAPPC9-213ENST00000522504 CAMPP49913 170 aa9.33□□□□□ -0.92
TRAPPC9-213ENST00000522504 CT83Q5H943 113 aa9.33□□□□□ -0.92
TRAPPC9-213ENST00000522504 ANAPC16Q96DE5 110 aa9.33□□□□□ -0.92
TRAPPC9-213ENST00000522504 PKIGQ9Y2B9 76 aa9.33□□□□□ -0.92
TRAPPC9-213ENST00000522504 LOC107984640A0A0U1RRK4 108 aa9.32□□□□□ -0.92
TRAPPC9-213ENST00000522504 A8MWL6 223 aa9.32□□□□□ -0.92
TRAPPC9-213ENST00000522504 SS18Q15532 418 aa9.32□□□□□ -0.92
TRAPPC9-213ENST00000522504 MRPL52Q86TS9 123 aaKnown RBP9.32□□□□□ -0.92
TRAPPC9-213ENST00000522504 RPS10P5Q9NQ39 176 aa9.32□□□□□ -0.92
TRAPPC9-213ENST00000522504 C7orf77A4D0Y5 90 aa9.31□□□□□ -0.92
TRAPPC9-213ENST00000522504 ATP6V1G1O75348 118 aa9.31□□□□□ -0.92
TRAPPC9-213ENST00000522504 RHEBQ15382 184 aa9.31□□□□□ -0.92
TRAPPC9-213ENST00000522504 C9orf116Q5BN46 136 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC9-213ENST00000522504 SMIM15Q7Z3B0 74 aa9.31□□□□□ -0.92
TRAPPC9-213ENST00000522504 ZNF664Q8N3J9 261 aa9.31□□□□□ -0.92
TRAPPC9-213ENST00000522504 NUP35Q8NFH5 326 aa9.31□□□□□ -0.92
TRAPPC9-213ENST00000522504 TSKUQ8WUA8 353 aa9.31□□□□□ -0.92
TRAPPC9-213ENST00000522504 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
TRAPPC9-213ENST00000522504 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC9-213ENST00000522504 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
TRAPPC9-213ENST00000522504 CTDSP1Q9GZU7 261 aa9.3□□□□□ -0.92
TRAPPC9-213ENST00000522504 MT-ND6P03923 174 aa9.29□□□□□ -0.92
TRAPPC9-213ENST00000522504 POLR2KP53803 58 aaKnown RBP9.29□□□□□ -0.92
TRAPPC9-213ENST00000522504 PRR26Q8N8Z3 221 aa9.29□□□□□ -0.92
TRAPPC9-213ENST00000522504 ST20Q9HBF5 79 aa9.29□□□□□ -0.92
TRAPPC9-213ENST00000522504 SMIM27A0A1W2PRY6 76 aa9.28□□□□□ -0.92
TRAPPC9-213ENST00000522504 HIGD1CA8MV81 97 aa9.28□□□□□ -0.92
TRAPPC9-213ENST00000522504 APOMO95445 188 aa9.28□□□□□ -0.92
TRAPPC9-213ENST00000522504 RNASE13Q5GAN3 156 aaKnown RBP9.28□□□□□ -0.92
TRAPPC9-213ENST00000522504 C1orf137Q5JT78 98 aa9.28□□□□□ -0.92
TRAPPC9-213ENST00000522504 KRTAP11-1Q8IUC1 163 aa9.28□□□□□ -0.92
TRAPPC9-213ENST00000522504 OPRPNQ99935 248 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC9-213ENST00000522504 TRBV27A0A0K0K1C4 114 aa9.27□□□□□ -0.93
TRAPPC9-213ENST00000522504 COX7A2LO14548 114 aa9.27□□□□□ -0.93
TRAPPC9-213ENST00000522504 MALP21145 153 aa9.27□□□□□ -0.93
TRAPPC9-213ENST00000522504 BORCS7Q96B45 105 aa9.27□□□□□ -0.93
TRAPPC9-213ENST00000522504 CAMK2N2Q96S95 79 aa9.27□□□□□ -0.93
TRAPPC9-213ENST00000522504 NAT8BQ9UHF3 227 aa9.27□□□□□ -0.93
TRAPPC9-213ENST00000522504 C1orf196B1AJZ1 125 aa9.26□□□□□ -0.93
TRAPPC9-213ENST00000522504 S100A1P23297 94 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms