RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 COX8AP10176 69 aa5.03□□□□□ -1.6
CTNNA1-227ENST00000521387 HINT1P49773 126 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-227ENST00000521387 SUMO2P61956 95 aaKnown RBP5.03□□□□□ -1.6
CTNNA1-227ENST00000521387 SUMO4Q6EEV6 95 aa5.03□□□□□ -1.6
CTNNA1-227ENST00000521387 SLC25A34Q6PIV7 304 aa5.03□□□□□ -1.6
CTNNA1-227ENST00000521387 C15orf53Q8NAA6 179 aa5.03□□□□□ -1.6
CTNNA1-227ENST00000521387 ATP5LO75964 103 aa5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 NUDT3O95989 172 aa5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 PLA2G1BP04054 148 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 PRM2P04554 102 aa5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 CRYGDP07320 174 aa5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 FGF6P10767 208 aa5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 POLR2KP53803 58 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 ODF1Q14990 250 aa5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 MORN3Q6PF18 240 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 Q6ZRN7 208 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 NEGR1Q7Z3B1 354 aa5.02□□□□□ -1.61
CTNNA1-227ENST00000521387 TRGV11A0A075B6L2 103 aa5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 CBY3A6NI87 242 aa5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 F5H697 171 aa5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 MIFP14174 115 aa5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 RPL32P62910 135 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 ORMDL2Q53FV1 153 aa5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 COL5A1-AS1Q5SY13 56 aa5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 C2orf91Q6ZV80 131 aa5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 TOMM6Q96B49 74 aa5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 SPAG8Q99932 426 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 FAM30AQ9NZY2 134 aa5.01□□□□□ -1.61
CTNNA1-227ENST00000521387 A0A087WX48 190 aa5□□□□□ -1.61
CTNNA1-227ENST00000521387 PPP1R17O96001 155 aa5□□□□□ -1.61
CTNNA1-227ENST00000521387 IGKCP01834 107 aa5□□□□□ -1.61
CTNNA1-227ENST00000521387 FAM74A4Q5TZK3 123 aa5□□□□□ -1.61
CTNNA1-227ENST00000521387 SCGB3A1Q96QR1 104 aa5□□□□□ -1.61
CTNNA1-227ENST00000521387 HHLA3Q9XRX5 114 aa5□□□□□ -1.61
CTNNA1-227ENST00000521387 IGKV2D-26A0A0A0MRZ7 120 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 TRBV6-5A0A0K0K1A5 114 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 K7EMI3 77 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 M0QY20 66 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 VCYO14598 125 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 DPM2O94777 84 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 HTN1P15515 57 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 G0S2P27469 103 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 ZNF876PQ49A33 203 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 MPV17L2Q567V2 206 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 BVES-AS1Q5T3Y7 98 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 C2orf66Q6UXQ4 117 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 ZFP2Q6ZN57 461 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 PCP2Q8IVA1 136 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 BOD1L2Q8IYS8 172 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 LINC00469Q8N7U9 141 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 CLUHP3Q96NS8 147 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 LINC01587Q99440 93 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 LINC00467Q9BRT7 94 aa4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 MRPL35Q9NZE8 188 aaKnown RBP4.99□□□□□ -1.61
CTNNA1-227ENST00000521387 TRAV12-1A0A0B4J245 112 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 SDHAF1A6NFY7 115 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 DLEU1O43261 78 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 ZNF25P17030 456 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 GCSHP23434 173 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 ZNF56Q15929 161 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 UFSP1Q6NVU6 142 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 Q6ZVH6 145 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 TRPT1Q86TN4 253 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 C11orf72Q8NBR9 251 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 NEXN-AS1Q8NBZ9 246 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 BAALCQ8WXS3 180 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 PTH2Q96A98 100 aa4.98□□□□□ -1.61
CTNNA1-227ENST00000521387 IGHV3-73A0A0B4J1V6 119 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 TRBV27A0A0K0K1C4 114 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 H7C1H1 209 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 M0R2P5 195 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 TSHBP01222 138 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 INSP01308 110 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 AZU1P20160 251 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 NMUP48645 174 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 RPL39P62891 51 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 ZNF415Q09FC8 603 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 ZC2HC1BQ5TFG8 222 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 ERASQ7Z444 233 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 STHQ8IWL8 128 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 C1orf158Q8N1D5 194 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 TTTY13Q9BZ97 58 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 XCL2Q9UBD3 114 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 CHTOPQ9Y3Y2 248 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 LINC00588Q9Y4M8 146 aa4.97□□□□□ -1.61
CTNNA1-227ENST00000521387 IGIPA6NJ69 53 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 F8VRH5 84 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 SIVA1O15304 175 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 RS1O15537 224 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 TMEM97Q5BJF2 176 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 CSNK1G2-AS1Q8NCQ2 148 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 SPXQ9BT56 116 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 TMEM208Q9BTX3 173 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 MRPL16Q9NX20 251 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 Q9UF83 564 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 CYSLTR1Q9Y271 337 aa4.96□□□□□ -1.62
CTNNA1-227ENST00000521387 A8MWV9 139 aa4.95□□□□□ -1.62
CTNNA1-227ENST00000521387 TAX1BP3O14907 124 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms