RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 PDE6DO43924 150 aa5.67□□□□□ -1.5
CDH17-204ENST00000520952 SMIM12Q96EX1 92 aa5.67□□□□□ -1.5
CDH17-204ENST00000520952 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
CDH17-204ENST00000520952 RPP21Q9H633 154 aaKnown RBP5.67□□□□□ -1.5
CDH17-204ENST00000520952 LINC00959A0A1B0GUT2 108 aa5.66□□□□□ -1.5
CDH17-204ENST00000520952 SDHAF1A6NFY7 115 aa5.66□□□□□ -1.5
CDH17-204ENST00000520952 CCL25O15444 150 aa5.66□□□□□ -1.5
CDH17-204ENST00000520952 APCSP02743 223 aa5.66□□□□□ -1.5
CDH17-204ENST00000520952 BCL2P10415 239 aa5.66□□□□□ -1.5
CDH17-204ENST00000520952 PMCHP20382 165 aa5.66□□□□□ -1.5
CDH17-204ENST00000520952 SRSF9Q13242 221 aaKnown RBP eCLIP5.66□□□□□ -1.5
CDH17-204ENST00000520952 OR5A1Q8NGJ0 315 aa5.66□□□□□ -1.5
CDH17-204ENST00000520952 BIN3Q9NQY0 253 aa5.66□□□□□ -1.5
CDH17-204ENST00000520952 TEX46H3BTG2 121 aa5.65□□□□□ -1.5
CDH17-204ENST00000520952 NCR2O95944 276 aa5.65□□□□□ -1.5
CDH17-204ENST00000520952 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
CDH17-204ENST00000520952 H7C423 109 aa5.64□□□□□ -1.51
CDH17-204ENST00000520952 I3L3M4 83 aa5.64□□□□□ -1.51
CDH17-204ENST00000520952 TSHBP01222 138 aa5.64□□□□□ -1.51
CDH17-204ENST00000520952 ESDP10768 282 aa5.64□□□□□ -1.51
CDH17-204ENST00000520952 SPINK6Q6UWN8 80 aa5.64□□□□□ -1.51
CDH17-204ENST00000520952 CARD19Q96LW7 228 aa5.64□□□□□ -1.51
CDH17-204ENST00000520952 TMEM242Q9NWH2 141 aa5.64□□□□□ -1.51
CDH17-204ENST00000520952 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
CDH17-204ENST00000520952 A0A1W2PNN7 141 aa5.63□□□□□ -1.51
CDH17-204ENST00000520952 GATCO43716 136 aaKnown RBP5.63□□□□□ -1.51
CDH17-204ENST00000520952 SYCNQ0VAF6 134 aa5.63□□□□□ -1.51
CDH17-204ENST00000520952 GAGE2BQ13066 116 aa5.63□□□□□ -1.51
CDH17-204ENST00000520952 EIF5AL1Q6IS14 154 aaKnown RBP5.63□□□□□ -1.51
CDH17-204ENST00000520952 SMIM15Q7Z3B0 74 aa5.63□□□□□ -1.51
CDH17-204ENST00000520952 TMEM101Q96IK0 257 aa5.63□□□□□ -1.51
CDH17-204ENST00000520952 BTF3L4Q96K17 158 aa5.63□□□□□ -1.51
CDH17-204ENST00000520952 CDC42SE2Q9NRR3 84 aa5.63□□□□□ -1.51
CDH17-204ENST00000520952 TRBV6-5A0A0K0K1A5 114 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 TNFRSF6BO95407 300 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 ZNF25P17030 456 aaPredicted RBP5.62□□□□□ -1.51
CDH17-204ENST00000520952 PTTG1IPP53801 180 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 SS18Q15532 418 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 REG3GQ6UW15 175 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 TEX261Q6UWH6 196 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 CD164L2Q6UWJ8 174 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 Q6ZRP5 223 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 ST20Q9HBF5 79 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 LINC00474Q9P2X8 69 aa5.62□□□□□ -1.51
CDH17-204ENST00000520952 IGLV4-69A0A075B6H9 119 aa5.61□□□□□ -1.51
CDH17-204ENST00000520952 SMKR1H3BMG3 65 aa5.61□□□□□ -1.51
CDH17-204ENST00000520952 POLR2KP53803 58 aaKnown RBP5.61□□□□□ -1.51
CDH17-204ENST00000520952 RNASE13Q5GAN3 156 aaKnown RBP5.61□□□□□ -1.51
CDH17-204ENST00000520952 ZNF664Q8N3J9 261 aa5.61□□□□□ -1.51
CDH17-204ENST00000520952 A8MWL6 223 aa5.6□□□□□ -1.51
CDH17-204ENST00000520952 RAB4AP20338 218 aa5.6□□□□□ -1.51
CDH17-204ENST00000520952 CAMPP49913 170 aa5.6□□□□□ -1.51
CDH17-204ENST00000520952 CEBPGP53567 150 aa5.6□□□□□ -1.51
CDH17-204ENST00000520952 MRPL52Q86TS9 123 aaKnown RBP5.6□□□□□ -1.51
CDH17-204ENST00000520952 SLC51BQ86UW2 128 aa5.6□□□□□ -1.51
CDH17-204ENST00000520952 MRAP2Q96G30 205 aa5.6□□□□□ -1.51
CDH17-204ENST00000520952 LOC107984640A0A0U1RRK4 108 aa5.59□□□□□ -1.51
CDH17-204ENST00000520952 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.51
CDH17-204ENST00000520952 FAM231DQ6ZW35 169 aa5.59□□□□□ -1.51
CDH17-204ENST00000520952 PHF5AQ7RTV0 110 aaKnown RBP5.59□□□□□ -1.51
CDH17-204ENST00000520952 C5orf38Q86SI9 138 aa5.59□□□□□ -1.51
CDH17-204ENST00000520952 AMN1Q8IY45 258 aa5.59□□□□□ -1.51
CDH17-204ENST00000520952 NUP35Q8NFH5 326 aa5.59□□□□□ -1.51
CDH17-204ENST00000520952 OPRPNQ99935 248 aaPredicted RBP5.59□□□□□ -1.51
CDH17-204ENST00000520952 PSORS1C2Q9UIG4 136 aa5.59□□□□□ -1.51
CDH17-204ENST00000520952 TRAV13-1A0A0B4J241 112 aa5.58□□□□□ -1.52
CDH17-204ENST00000520952 TRBV27A0A0K0K1C4 114 aa5.58□□□□□ -1.52
CDH17-204ENST00000520952 C7orf77A4D0Y5 90 aa5.58□□□□□ -1.52
CDH17-204ENST00000520952 HIGD1CA8MV81 97 aa5.58□□□□□ -1.52
CDH17-204ENST00000520952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.58□□□□□ -1.52
CDH17-204ENST00000520952 COX7A2LO14548 114 aa5.58□□□□□ -1.52
CDH17-204ENST00000520952 TAGLN2P37802 199 aaKnown RBP5.58□□□□□ -1.52
CDH17-204ENST00000520952 CAMK2N2Q96S95 79 aa5.58□□□□□ -1.52
CDH17-204ENST00000520952 TMEM191AQ9H0A3 160 aa5.58□□□□□ -1.52
CDH17-204ENST00000520952 A0A1B0GUT8 65 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 C1orf196B1AJZ1 125 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 TMEM250H0YL14 139 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 VCYO14598 125 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 APOMO95445 188 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 MT-ND6P03923 174 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 C1orf137Q5JT78 98 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 KRTAP11-1Q8IUC1 163 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 TCTE3Q8IZS6 198 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 NRACQ8N912 160 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 TSKUQ8WUA8 353 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 ISOC2Q96AB3 205 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 PKIGQ9Y2B9 76 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 UBE2D4Q9Y2X8 147 aa5.57□□□□□ -1.52
CDH17-204ENST00000520952 FCER1GP30273 86 aa5.56□□□□□ -1.52
CDH17-204ENST00000520952 RPL18AQ02543 176 aaKnown RBP5.56□□□□□ -1.52
CDH17-204ENST00000520952 ALKAL2Q6UX46 152 aa5.56□□□□□ -1.52
CDH17-204ENST00000520952 Q6ZUT4 128 aa5.56□□□□□ -1.52
CDH17-204ENST00000520952 LINC01551Q86U37 167 aa5.56□□□□□ -1.52
CDH17-204ENST00000520952 BORCS7Q96B45 105 aa5.56□□□□□ -1.52
CDH17-204ENST00000520952 MUC2Q02817 5179 aa5.55□□□□□ -1.52
CDH17-204ENST00000520952 FAM168BA1KXE4 195 aa5.55□□□□□ -1.52
CDH17-204ENST00000520952 SUMO2P61956 95 aaKnown RBP5.55□□□□□ -1.52
CDH17-204ENST00000520952 PRR26Q8N8Z3 221 aa5.55□□□□□ -1.52
CDH17-204ENST00000520952 FAM104AQ969W3 186 aa5.55□□□□□ -1.52
CDH17-204ENST00000520952 C2orf48Q96LS8 159 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms