RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 MRAP2Q96G30 205 aa9.54□□□□□ -0.88
CSMD1-207ENST00000520451 IGHV1-58A0A0C4DH39 117 aa9.53□□□□□ -0.88
CSMD1-207ENST00000520451 A0A1B0GUT8 65 aa9.53□□□□□ -0.88
CSMD1-207ENST00000520451 ESDP10768 282 aa9.53□□□□□ -0.88
CSMD1-207ENST00000520451 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
CSMD1-207ENST00000520451 HIGD1CA8MV81 97 aa9.52□□□□□ -0.89
CSMD1-207ENST00000520451 TSKUQ8WUA8 353 aa9.52□□□□□ -0.89
CSMD1-207ENST00000520451 LINC00526Q96FQ7 95 aa9.52□□□□□ -0.89
CSMD1-207ENST00000520451 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
CSMD1-207ENST00000520451 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
CSMD1-207ENST00000520451 TMEM191AQ9H0A3 160 aa9.52□□□□□ -0.89
CSMD1-207ENST00000520451 SS18Q15532 418 aa9.51□□□□□ -0.89
CSMD1-207ENST00000520451 LINC01551Q86U37 167 aa9.51□□□□□ -0.89
CSMD1-207ENST00000520451 LINC00474Q9P2X8 69 aa9.51□□□□□ -0.89
CSMD1-207ENST00000520451 PKIGQ9Y2B9 76 aa9.51□□□□□ -0.89
CSMD1-207ENST00000520451 TNXBP22105 4242 aa9.5□□□□□ -0.89
CSMD1-207ENST00000520451 RAB4AP20338 218 aa9.5□□□□□ -0.89
CSMD1-207ENST00000520451 POLR2KP53803 58 aaKnown RBP9.5□□□□□ -0.89
CSMD1-207ENST00000520451 MRPL52Q86TS9 123 aaKnown RBP9.5□□□□□ -0.89
CSMD1-207ENST00000520451 AMN1Q8IY45 258 aa9.5□□□□□ -0.89
CSMD1-207ENST00000520451 EIF5A2Q9GZV4 153 aaKnown RBP9.5□□□□□ -0.89
CSMD1-207ENST00000520451 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
CSMD1-207ENST00000520451 TRBV27A0A0K0K1C4 114 aa9.49□□□□□ -0.89
CSMD1-207ENST00000520451 C7orf77A4D0Y5 90 aa9.49□□□□□ -0.89
CSMD1-207ENST00000520451 ZNF561-AS1K7EIQ3 104 aa9.49□□□□□ -0.89
CSMD1-207ENST00000520451 CD164L2Q6UWJ8 174 aa9.49□□□□□ -0.89
CSMD1-207ENST00000520451 ZNF664Q8N3J9 261 aa9.49□□□□□ -0.89
CSMD1-207ENST00000520451 ZNF727A8MUV8 499 aa9.48□□□□□ -0.89
CSMD1-207ENST00000520451 SMKR1H3BMG3 65 aa9.48□□□□□ -0.89
CSMD1-207ENST00000520451 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
CSMD1-207ENST00000520451 OSTCQ9NRP0 149 aa9.48□□□□□ -0.89
CSMD1-207ENST00000520451 FCER1GP30273 86 aa9.47□□□□□ -0.89
CSMD1-207ENST00000520451 LINC01600Q96MT4 127 aa9.47□□□□□ -0.89
CSMD1-207ENST00000520451 VCYO14598 125 aa9.46□□□□□ -0.9
CSMD1-207ENST00000520451 MALP21145 153 aa9.46□□□□□ -0.9
CSMD1-207ENST00000520451 CAMPP49913 170 aa9.46□□□□□ -0.9
CSMD1-207ENST00000520451 RIGQ13278 110 aa9.46□□□□□ -0.9
CSMD1-207ENST00000520451 SRP19P09132 144 aaKnown RBP9.45□□□□□ -0.9
CSMD1-207ENST00000520451 NUP35Q8NFH5 326 aa9.45□□□□□ -0.9
CSMD1-207ENST00000520451 V9GYV3 84 aa9.45□□□□□ -0.9
CSMD1-207ENST00000520451 IGLV4-69A0A075B6H9 119 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 C1orf196B1AJZ1 125 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 COX7A2LO14548 114 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 PPP1R17O96001 155 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 PTTG1IPP53801 180 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 SUMO2P61956 95 aaKnown RBP9.44□□□□□ -0.9
CSMD1-207ENST00000520451 SMAGPQ0VAQ4 97 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
CSMD1-207ENST00000520451 SPINK6Q6UWN8 80 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 NRACQ8N912 160 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 ISOC2Q96AB3 205 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 LRP2P98164 4655 aa9.44□□□□□ -0.9
CSMD1-207ENST00000520451 TRAV13-1A0A0B4J241 112 aa9.43□□□□□ -0.9
CSMD1-207ENST00000520451 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
CSMD1-207ENST00000520451 GAGE2BQ13066 116 aa9.43□□□□□ -0.9
CSMD1-207ENST00000520451 Q6ZRP5 223 aa9.43□□□□□ -0.9
CSMD1-207ENST00000520451 KIR2DL4Q99706 377 aa9.43□□□□□ -0.9
CSMD1-207ENST00000520451 UBE2D4Q9Y2X8 147 aa9.43□□□□□ -0.9
CSMD1-207ENST00000520451 CSDC2Q9Y534 153 aaKnown RBP9.43□□□□□ -0.9
CSMD1-207ENST00000520451 A0A0J9YXV3 536 aa9.42□□□□□ -0.9
CSMD1-207ENST00000520451 IFITM2Q01629 132 aa9.42□□□□□ -0.9
CSMD1-207ENST00000520451 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
CSMD1-207ENST00000520451 NAT8BQ9UHF3 227 aa9.42□□□□□ -0.9
CSMD1-207ENST00000520451 PPP1R2P9O14990 202 aa9.41□□□□□ -0.9
CSMD1-207ENST00000520451 ODF1Q14990 250 aa9.41□□□□□ -0.9
CSMD1-207ENST00000520451 TMEM241Q24JQ0 296 aa9.41□□□□□ -0.9
CSMD1-207ENST00000520451 Q6ZUT4 128 aa9.41□□□□□ -0.9
CSMD1-207ENST00000520451 CAMK2N2Q96S95 79 aa9.41□□□□□ -0.9
CSMD1-207ENST00000520451 MRPL51Q4U2R6 128 aaKnown RBP9.4□□□□□ -0.9
CSMD1-207ENST00000520451 FAM104BQ5XKR9 115 aa9.4□□□□□ -0.9
CSMD1-207ENST00000520451 C5orf38Q86SI9 138 aa9.4□□□□□ -0.9
CSMD1-207ENST00000520451 TMEM18Q96B42 140 aa9.4□□□□□ -0.9
CSMD1-207ENST00000520451 APOMO95445 188 aa9.39□□□□□ -0.91
CSMD1-207ENST00000520451 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
CSMD1-207ENST00000520451 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
CSMD1-207ENST00000520451 ADIRFQ15847 76 aa9.39□□□□□ -0.91
CSMD1-207ENST00000520451 FAM74A3Q4VXF1 159 aa9.39□□□□□ -0.91
CSMD1-207ENST00000520451 C2orf48Q96LS8 159 aa9.39□□□□□ -0.91
CSMD1-207ENST00000520451 A0A1W2PNN7 141 aa9.38□□□□□ -0.91
CSMD1-207ENST00000520451 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-207ENST00000520451 RPL18AQ02543 176 aaKnown RBP9.38□□□□□ -0.91
CSMD1-207ENST00000520451 SPAG11BQ08648 103 aa9.38□□□□□ -0.91
CSMD1-207ENST00000520451 TIMM21Q9BVV7 248 aa9.38□□□□□ -0.91
CSMD1-207ENST00000520451 CKS2P33552 79 aa9.37□□□□□ -0.91
CSMD1-207ENST00000520451 KRTAP10-8P60410 259 aa9.37□□□□□ -0.91
CSMD1-207ENST00000520451 C20orf78Q9BR46 151 aa9.37□□□□□ -0.91
CSMD1-207ENST00000520451 SMIM27A0A1W2PRY6 76 aa9.36□□□□□ -0.91
CSMD1-207ENST00000520451 LINC00862A6NCI5 91 aa9.36□□□□□ -0.91
CSMD1-207ENST00000520451 RPL39P62891 51 aaKnown RBP9.36□□□□□ -0.91
CSMD1-207ENST00000520451 OPRPNQ99935 248 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-207ENST00000520451 NAT8Q9UHE5 227 aa9.36□□□□□ -0.91
CSMD1-207ENST00000520451 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
CSMD1-207ENST00000520451 A0A1B0GW15 77 aa9.35□□□□□ -0.91
CSMD1-207ENST00000520451 C9JQL5 133 aa9.35□□□□□ -0.91
CSMD1-207ENST00000520451 TCAPO15273 167 aa9.35□□□□□ -0.91
CSMD1-207ENST00000520451 RPL32P62910 135 aaKnown RBP9.35□□□□□ -0.91
CSMD1-207ENST00000520451 C9orf116Q5BN46 136 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-207ENST00000520451 TNFRSF6BO95407 300 aa9.34□□□□□ -0.91
CSMD1-207ENST00000520451 MT-ND6P03923 174 aa9.34□□□□□ -0.91
CSMD1-207ENST00000520451 OR10D4PQ8NGN7 298 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms