RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 ATP5L2Q7Z4Y8 100 aa9.23□□□□□ -0.93
VEGFA-221ENST00000520265 CLRN3Q8NCR9 226 aa9.23□□□□□ -0.93
VEGFA-221ENST00000520265 IFITM2Q01629 132 aa9.22□□□□□ -0.93
VEGFA-221ENST00000520265 SS18Q15532 418 aa9.22□□□□□ -0.93
VEGFA-221ENST00000520265 RNASE13Q5GAN3 156 aaKnown RBP9.22□□□□□ -0.93
VEGFA-221ENST00000520265 TMEM18Q96B42 140 aa9.22□□□□□ -0.93
VEGFA-221ENST00000520265 C20orf78Q9BR46 151 aa9.22□□□□□ -0.93
VEGFA-221ENST00000520265 CCL25O15444 150 aa9.21□□□□□ -0.94
VEGFA-221ENST00000520265 NPYP01303 97 aa9.21□□□□□ -0.94
VEGFA-221ENST00000520265 UQCC3Q6UW78 93 aa9.21□□□□□ -0.94
VEGFA-221ENST00000520265 SCXQ7RTU7 201 aa9.21□□□□□ -0.94
VEGFA-221ENST00000520265 COMMD7Q86VX2 200 aa9.21□□□□□ -0.94
VEGFA-221ENST00000520265 ORMDL3Q8N138 153 aa9.21□□□□□ -0.94
VEGFA-221ENST00000520265 SMIM2Q9BVW6 85 aa9.21□□□□□ -0.94
VEGFA-221ENST00000520265 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.2□□□□□ -0.94
VEGFA-221ENST00000520265 LINC00959A0A1B0GUT2 108 aa9.2□□□□□ -0.94
VEGFA-221ENST00000520265 PPBPP02775 128 aa9.2□□□□□ -0.94
VEGFA-221ENST00000520265 TMEM136Q6ZRR5 245 aa9.2□□□□□ -0.94
VEGFA-221ENST00000520265 ZNF664Q8N3J9 261 aa9.2□□□□□ -0.94
VEGFA-221ENST00000520265 PRELID3AQ96N28 172 aa9.2□□□□□ -0.94
VEGFA-221ENST00000520265 LOC389332A0A1B0GUA5 103 aa9.19□□□□□ -0.94
VEGFA-221ENST00000520265 TCAPO15273 167 aa9.19□□□□□ -0.94
VEGFA-221ENST00000520265 INAFM2P0DMQ5 153 aa9.19□□□□□ -0.94
VEGFA-221ENST00000520265 RAB5AP20339 215 aa9.19□□□□□ -0.94
VEGFA-221ENST00000520265 Q6ZSA8 131 aa9.19□□□□□ -0.94
VEGFA-221ENST00000520265 MRPL52Q86TS9 123 aaKnown RBP9.19□□□□□ -0.94
VEGFA-221ENST00000520265 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
VEGFA-221ENST00000520265 DPH3Q96FX2 82 aa9.19□□□□□ -0.94
VEGFA-221ENST00000520265 ABCA13Q86UQ4 5058 aa9.18□□□□□ -0.94
VEGFA-221ENST00000520265 IGHV3-64A0A075B6Q5 118 aa9.18□□□□□ -0.94
VEGFA-221ENST00000520265 TRAV13-1A0A0B4J241 112 aa9.18□□□□□ -0.94
VEGFA-221ENST00000520265 TMEM218A2RU14 115 aa9.18□□□□□ -0.94
VEGFA-221ENST00000520265 Q6ZUT4 128 aa9.18□□□□□ -0.94
VEGFA-221ENST00000520265 CHAC1Q9BUX1 264 aa9.18□□□□□ -0.94
VEGFA-221ENST00000520265 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
VEGFA-221ENST00000520265 UBE2D4Q9Y2X8 147 aa9.18□□□□□ -0.94
VEGFA-221ENST00000520265 TRBV24-1A0A075B6N3 115 aa9.17□□□□□ -0.94
VEGFA-221ENST00000520265 ADCYAP1P18509 176 aa9.17□□□□□ -0.94
VEGFA-221ENST00000520265 MALP21145 153 aa9.17□□□□□ -0.94
VEGFA-221ENST00000520265 RPL39P62891 51 aaKnown RBP9.17□□□□□ -0.94
VEGFA-221ENST00000520265 FOXI1Q12951 378 aa9.17□□□□□ -0.94
VEGFA-221ENST00000520265 C15orf56Q8N910 161 aa9.17□□□□□ -0.94
VEGFA-221ENST00000520265 C9orf163Q8N9P6 203 aa9.17□□□□□ -0.94
VEGFA-221ENST00000520265 CTDSP1Q9GZU7 261 aa9.17□□□□□ -0.94
VEGFA-221ENST00000520265 MAP1LC3AQ9H492 121 aa9.17□□□□□ -0.94
VEGFA-221ENST00000520265 PHOX2AO14813 284 aa9.16□□□□□ -0.94
VEGFA-221ENST00000520265 PLA2G1BP04054 148 aaKnown RBP9.16□□□□□ -0.94
VEGFA-221ENST00000520265 CIRBP-AS1Q8TBR5 109 aa9.16□□□□□ -0.94
VEGFA-221ENST00000520265 S100PP25815 95 aa9.15□□□□□ -0.94
VEGFA-221ENST00000520265 CNBPP62633 177 aaKnown RBP9.15□□□□□ -0.94
VEGFA-221ENST00000520265 RPL32P62910 135 aaKnown RBP9.15□□□□□ -0.94
VEGFA-221ENST00000520265 IGHV1-58A0A0C4DH39 117 aa9.14□□□□□ -0.95
VEGFA-221ENST00000520265 C1orf196B1AJZ1 125 aa9.14□□□□□ -0.95
VEGFA-221ENST00000520265 CD164L2Q6UWJ8 174 aa9.14□□□□□ -0.95
VEGFA-221ENST00000520265 LINC00526Q96FQ7 95 aa9.14□□□□□ -0.95
VEGFA-221ENST00000520265 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
VEGFA-221ENST00000520265 COX7A2LO14548 114 aa9.13□□□□□ -0.95
VEGFA-221ENST00000520265 SEC11CQ9BY50 192 aa9.13□□□□□ -0.95
VEGFA-221ENST00000520265 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
VEGFA-221ENST00000520265 CSDC2Q9Y534 153 aaKnown RBP9.13□□□□□ -0.95
VEGFA-221ENST00000520265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-221ENST00000520265 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-221ENST00000520265 IFITM10A6NMD0 228 aa9.12□□□□□ -0.95
VEGFA-221ENST00000520265 IFI27P40305 119 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-221ENST00000520265 IMMP2LQ96T52 175 aa9.12□□□□□ -0.95
VEGFA-221ENST00000520265 TIMM21Q9BVV7 248 aa9.12□□□□□ -0.95
VEGFA-221ENST00000520265 LAMTOR2Q9Y2Q5 125 aa9.12□□□□□ -0.95
VEGFA-221ENST00000520265 IGKV2-24A0A0C4DH68 120 aa9.11□□□□□ -0.95
VEGFA-221ENST00000520265 SLPIP03973 132 aa9.11□□□□□ -0.95
VEGFA-221ENST00000520265 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
VEGFA-221ENST00000520265 KIAA1644Q3SXP7 199 aa9.11□□□□□ -0.95
VEGFA-221ENST00000520265 C5orf38Q86SI9 138 aa9.11□□□□□ -0.95
VEGFA-221ENST00000520265 OPRPNQ99935 248 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-221ENST00000520265 RPS10P5Q9NQ39 176 aa9.11□□□□□ -0.95
VEGFA-221ENST00000520265 COX6A2Q02221 97 aa9.1□□□□□ -0.95
VEGFA-221ENST00000520265 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
VEGFA-221ENST00000520265 CARD19Q96LW7 228 aa9.1□□□□□ -0.95
VEGFA-221ENST00000520265 PANO1I0J062 215 aa9.09□□□□□ -0.95
VEGFA-221ENST00000520265 APOMO95445 188 aa9.09□□□□□ -0.95
VEGFA-221ENST00000520265 Q8N8P6 123 aa9.09□□□□□ -0.95
VEGFA-221ENST00000520265 TRAV9-1A0A075B6T8 112 aa9.08□□□□□ -0.96
VEGFA-221ENST00000520265 RPL37AP61513 92 aaKnown RBP9.08□□□□□ -0.96
VEGFA-221ENST00000520265 MAJINQ3KP22 176 aa9.08□□□□□ -0.96
VEGFA-221ENST00000520265 Q6ZN92 141 aa9.08□□□□□ -0.96
VEGFA-221ENST00000520265 CYSLTR1Q9Y271 337 aa9.08□□□□□ -0.96
VEGFA-221ENST00000520265 SPAG11BQ08648 103 aa9.07□□□□□ -0.96
VEGFA-221ENST00000520265 SYCNQ0VAF6 134 aa9.07□□□□□ -0.96
VEGFA-221ENST00000520265 ORMDL2Q53FV1 153 aa9.07□□□□□ -0.96
VEGFA-221ENST00000520265 CAMK2N2Q96S95 79 aa9.07□□□□□ -0.96
VEGFA-221ENST00000520265 NXT2Q9NPJ8 142 aaKnown RBP9.07□□□□□ -0.96
VEGFA-221ENST00000520265 IGLV4-69A0A075B6H9 119 aa9.06□□□□□ -0.96
VEGFA-221ENST00000520265 TGIF2-C20orf24A0A0A6YYL0 155 aa9.06□□□□□ -0.96
VEGFA-221ENST00000520265 MRPS36P82909 103 aaKnown RBP9.06□□□□□ -0.96
VEGFA-221ENST00000520265 RHEBQ15382 184 aa9.06□□□□□ -0.96
VEGFA-221ENST00000520265 NDUFA5Q16718 116 aa9.06□□□□□ -0.96
VEGFA-221ENST00000520265 C2orf66Q6UXQ4 117 aa9.06□□□□□ -0.96
VEGFA-221ENST00000520265 TEX43Q6ZNM6 134 aa9.06□□□□□ -0.96
VEGFA-221ENST00000520265 PRSS3P2Q8NHM4 247 aa9.06□□□□□ -0.96
VEGFA-221ENST00000520265 TMEM141Q96I45 108 aa9.06□□□□□ -0.96
VEGFA-221ENST00000520265 C2orf88Q9BSF0 95 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms