RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CNBP	P62633	177 aa	Known RBP	15.69	■□□□□ 0.1
CNOT7-204	ENST00000518885	SCX	Q7RTU7	201 aa		15.69	■□□□□ 0.1
CNOT7-204	ENST00000518885	TMEM18	Q96B42	140 aa		15.69	■□□□□ 0.1
CNOT7-204	ENST00000518885	MRPL54	Q6P161	138 aa	Known RBP	15.68	■□□□□ 0.1
CNOT7-204	ENST00000518885	ATP5L2	Q7Z4Y8	100 aa		15.68	■□□□□ 0.1
CNOT7-204	ENST00000518885	NRAC	Q8N912	160 aa		15.68	■□□□□ 0.1
CNOT7-204	ENST00000518885	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	15.68	■□□□□ 0.1
CNOT7-204	ENST00000518885	DNAH8	Q96JB1	4490 aa		15.68	■□□□□ 0.1
CNOT7-204	ENST00000518885	LINC00528	Q8N1L1	170 aa		15.67	■□□□□ 0.1
CNOT7-204	ENST00000518885	VPS13B	Q7Z7G8	4022 aa		15.66	■□□□□ 0.1
CNOT7-204	ENST00000518885	PPBP	P02775	128 aa		15.66	■□□□□ 0.1
CNOT7-204	ENST00000518885	MT-ND4L	P03901	98 aa		15.66	■□□□□ 0.1
CNOT7-204	ENST00000518885	TRBV24-1	A0A075B6N3	115 aa		15.65	■□□□□ 0.1
CNOT7-204	ENST00000518885	SS18	Q15532	418 aa		15.65	■□□□□ 0.1
CNOT7-204	ENST00000518885	CLLU1	Q5K131	121 aa		15.65	■□□□□ 0.1
CNOT7-204	ENST00000518885	ANAPC16	Q96DE5	110 aa		15.65	■□□□□ 0.1
CNOT7-204	ENST00000518885	SRRM2	Q9UQ35	2752 aa	Known RBP	15.65	■□□□□ 0.1
CNOT7-204	ENST00000518885	IGHV3-64	A0A075B6Q5	118 aa		15.64	■□□□□ 0.09
CNOT7-204	ENST00000518885	RPL32	P62910	135 aa	Known RBP	15.64	■□□□□ 0.09
CNOT7-204	ENST00000518885	FAT1	Q14517	4588 aa		15.64	■□□□□ 0.09
CNOT7-204	ENST00000518885	ZNF664	Q8N3J9	261 aa		15.64	■□□□□ 0.09
CNOT7-204	ENST00000518885		A0A1B0GXF2	115 aa		15.63	■□□□□ 0.09
CNOT7-204	ENST00000518885	CIRBP-AS1	Q8TBR5	109 aa		15.63	■□□□□ 0.09
CNOT7-204	ENST00000518885	CDC42SE2	Q9NRR3	84 aa		15.63	■□□□□ 0.09
CNOT7-204	ENST00000518885	CSDC2	Q9Y534	153 aa	Known RBP	15.63	■□□□□ 0.09
CNOT7-204	ENST00000518885	LINC00959	A0A1B0GUT2	108 aa		15.62	■□□□□ 0.09
CNOT7-204	ENST00000518885	PHOX2A	O14813	284 aa		15.62	■□□□□ 0.09
CNOT7-204	ENST00000518885	CCL25	O15444	150 aa		15.62	■□□□□ 0.09
CNOT7-204	ENST00000518885		D6R8Y8	96 aa		15.61	■□□□□ 0.09
CNOT7-204	ENST00000518885	TNFRSF6B	O95407	300 aa		15.61	■□□□□ 0.09
CNOT7-204	ENST00000518885	XCL1	P47992	114 aa		15.61	■□□□□ 0.09
CNOT7-204	ENST00000518885	C15orf56	Q8N910	161 aa		15.6	■□□□□ 0.09
CNOT7-204	ENST00000518885	FOXI1	Q12951	378 aa		15.59	■□□□□ 0.09
CNOT7-204	ENST00000518885	ORMDL3	Q8N138	153 aa		15.59	■□□□□ 0.09
CNOT7-204	ENST00000518885	SMIM2	Q9BVW6	85 aa		15.59	■□□□□ 0.09
CNOT7-204	ENST00000518885	UQCC3	Q6UW78	93 aa		15.58	■□□□□ 0.08
CNOT7-204	ENST00000518885	SDIM1	Q6ZPB5	146 aa		15.58	■□□□□ 0.08
CNOT7-204	ENST00000518885	TIMM21	Q9BVV7	248 aa		15.58	■□□□□ 0.08
CNOT7-204	ENST00000518885	PKIG	Q9Y2B9	76 aa		15.58	■□□□□ 0.08
CNOT7-204	ENST00000518885	UBE2D4	Q9Y2X8	147 aa		15.58	■□□□□ 0.08
CNOT7-204	ENST00000518885	GVQW2	A0A096LPI5	108 aa	Predicted RBP	15.57	■□□□□ 0.08
CNOT7-204	ENST00000518885	C1orf196	B1AJZ1	125 aa		15.57	■□□□□ 0.08
CNOT7-204	ENST00000518885	CD164L2	Q6UWJ8	174 aa		15.57	■□□□□ 0.08
CNOT7-204	ENST00000518885	IGHV1-58	A0A0C4DH39	117 aa		15.56	■□□□□ 0.08
CNOT7-204	ENST00000518885	HIGD2B	Q4VC39	106 aa		15.55	■□□□□ 0.08
CNOT7-204	ENST00000518885	TMEM136	Q6ZRR5	245 aa		15.55	■□□□□ 0.08
CNOT7-204	ENST00000518885	DPH3	Q96FX2	82 aa		15.55	■□□□□ 0.08
CNOT7-204	ENST00000518885	LAMTOR2	Q9Y2Q5	125 aa		15.55	■□□□□ 0.08
CNOT7-204	ENST00000518885	RAB5A	P20339	215 aa		15.54	■□□□□ 0.08
CNOT7-204	ENST00000518885	PRELID3A	Q96N28	172 aa		15.54	■□□□□ 0.08
CNOT7-204	ENST00000518885	NPY	P01303	97 aa		15.53	■□□□□ 0.08
CNOT7-204	ENST00000518885	MAL	P21145	153 aa		15.52	■□□□□ 0.08
CNOT7-204	ENST00000518885	SPANXA1	Q9NS26	97 aa		15.52	■□□□□ 0.08
CNOT7-204	ENST00000518885	SLPI	P03973	132 aa		15.51	■□□□□ 0.07
CNOT7-204	ENST00000518885	IMMP2L	Q96T52	175 aa		15.51	■□□□□ 0.07
CNOT7-204	ENST00000518885	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	15.51	■□□□□ 0.07
CNOT7-204	ENST00000518885	ZNF561-AS1	K7EIQ3	104 aa		15.5	■□□□□ 0.07
CNOT7-204	ENST00000518885	CIRBP	Q14011	172 aa	Known RBP	15.5	■□□□□ 0.07
CNOT7-204	ENST00000518885	COX7A2L	O14548	114 aa		15.49	■□□□□ 0.07
CNOT7-204	ENST00000518885	MAP1LC3A	Q9H492	121 aa		15.49	■□□□□ 0.07
CNOT7-204	ENST00000518885	TRAV13-1	A0A0B4J241	112 aa		15.48	■□□□□ 0.07
CNOT7-204	ENST00000518885		Q6ZUT4	128 aa		15.48	■□□□□ 0.07
CNOT7-204	ENST00000518885	CTDSP1	Q9GZU7	261 aa		15.48	■□□□□ 0.07
CNOT7-204	ENST00000518885	TMEM218	A2RU14	115 aa		15.47	■□□□□ 0.07
CNOT7-204	ENST00000518885	APOM	O95445	188 aa		15.46	■□□□□ 0.07
CNOT7-204	ENST00000518885	RPL37A	P61513	92 aa	Known RBP	15.46	■□□□□ 0.07
CNOT7-204	ENST00000518885	RPL39	P62891	51 aa	Known RBP	15.46	■□□□□ 0.07
CNOT7-204	ENST00000518885	MRPS36	P82909	103 aa	Known RBP	15.46	■□□□□ 0.07
CNOT7-204	ENST00000518885	RNASE13	Q5GAN3	156 aa	Known RBP	15.46	■□□□□ 0.07
CNOT7-204	ENST00000518885	LINC00474	Q9P2X8	69 aa		15.46	■□□□□ 0.07
CNOT7-204	ENST00000518885	PRSS47	A8MTI9	375 aa		15.45	■□□□□ 0.06
CNOT7-204	ENST00000518885	IFI27	P40305	119 aa	Predicted RBP	15.45	■□□□□ 0.06
CNOT7-204	ENST00000518885	COX6A2	Q02221	97 aa		15.45	■□□□□ 0.06
CNOT7-204	ENST00000518885	SPACA4	Q8TDM5	124 aa		15.45	■□□□□ 0.06
CNOT7-204	ENST00000518885	CARD19	Q96LW7	228 aa		15.45	■□□□□ 0.06
CNOT7-204	ENST00000518885	IFITM2	Q01629	132 aa		15.44	■□□□□ 0.06
CNOT7-204	ENST00000518885	TRAV9-1	A0A075B6T8	112 aa		15.43	■□□□□ 0.06
CNOT7-204	ENST00000518885	PANO1	I0J062	215 aa		15.43	■□□□□ 0.06
CNOT7-204	ENST00000518885	SEC11C	Q9BY50	192 aa		15.43	■□□□□ 0.06
CNOT7-204	ENST00000518885	MYCBP2	O75592	4640 aa		15.42	■□□□□ 0.06
CNOT7-204	ENST00000518885		K7EMI3	77 aa		15.42	■□□□□ 0.06
CNOT7-204	ENST00000518885	S100P	P25815	95 aa		15.42	■□□□□ 0.06
CNOT7-204	ENST00000518885	SYCN	Q0VAF6	134 aa		15.42	■□□□□ 0.06
CNOT7-204	ENST00000518885	DMBT1	Q9UGM3	2413 aa	Predicted RBP	15.42	■□□□□ 0.06
CNOT7-204	ENST00000518885	LOC389332	A0A1B0GUA5	103 aa		15.41	■□□□□ 0.06
CNOT7-204	ENST00000518885	IFITM10	A6NMD0	228 aa		15.41	■□□□□ 0.06
CNOT7-204	ENST00000518885	PYGO1	Q9Y3Y4	419 aa		15.41	■□□□□ 0.06
CNOT7-204	ENST00000518885		A0A087WYN8	130 aa		15.4	■□□□□ 0.06
CNOT7-204	ENST00000518885		J3QL48	77 aa		15.4	■□□□□ 0.06
CNOT7-204	ENST00000518885	CHTF8	P0CG12	524 aa		15.4	■□□□□ 0.06
CNOT7-204	ENST00000518885	ADCYAP1	P18509	176 aa		15.4	■□□□□ 0.06
CNOT7-204	ENST00000518885	ORMDL2	Q53FV1	153 aa		15.4	■□□□□ 0.06
CNOT7-204	ENST00000518885		Q8N8P6	123 aa		15.4	■□□□□ 0.06
CNOT7-204	ENST00000518885	G0S2	P27469	103 aa		15.39	■□□□□ 0.05
CNOT7-204	ENST00000518885	MAJIN	Q3KP22	176 aa		15.39	■□□□□ 0.05
CNOT7-204	ENST00000518885	COMMD7	Q86VX2	200 aa		15.39	■□□□□ 0.05
CNOT7-204	ENST00000518885	PRSS3P2	Q8NHM4	247 aa		15.39	■□□□□ 0.05
CNOT7-204	ENST00000518885	PLAC8	Q9NZF1	115 aa		15.39	■□□□□ 0.05
CNOT7-204	ENST00000518885	IGKV2-24	A0A0C4DH68	120 aa		15.38	■□□□□ 0.05
CNOT7-204	ENST00000518885	OR10D4P	Q8NGN7	298 aa		15.38	■□□□□ 0.05

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms