RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 ESDP10768 282 aa7.43□□□□□ -1.22
TRAPPC9-204ENST00000518723 EIF5AP63241 154 aaKnown RBP7.43□□□□□ -1.22
TRAPPC9-204ENST00000518723 TWIST1Q15672 202 aa7.43□□□□□ -1.22
TRAPPC9-204ENST00000518723 EIF5AL1Q6IS14 154 aaKnown RBP7.43□□□□□ -1.22
TRAPPC9-204ENST00000518723 I3L3M4 83 aa7.42□□□□□ -1.22
TRAPPC9-204ENST00000518723 TEX261Q6UWH6 196 aa7.42□□□□□ -1.22
TRAPPC9-204ENST00000518723 MRPL52Q86TS9 123 aaKnown RBP7.42□□□□□ -1.22
TRAPPC9-204ENST00000518723 C2orf48Q96LS8 159 aa7.42□□□□□ -1.22
TRAPPC9-204ENST00000518723 FAM210AQ96ND0 272 aa7.42□□□□□ -1.22
TRAPPC9-204ENST00000518723 CAMK2N2Q96S95 79 aa7.42□□□□□ -1.22
TRAPPC9-204ENST00000518723 MANBALQ9NQG1 85 aa7.42□□□□□ -1.22
TRAPPC9-204ENST00000518723 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
TRAPPC9-204ENST00000518723 TRBV6-5A0A0K0K1A5 114 aa7.41□□□□□ -1.22
TRAPPC9-204ENST00000518723 ARPC5O15511 151 aa7.41□□□□□ -1.22
TRAPPC9-204ENST00000518723 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
TRAPPC9-204ENST00000518723 RPL13AP40429 203 aaKnown RBP7.41□□□□□ -1.22
TRAPPC9-204ENST00000518723 GNG4P50150 75 aa7.41□□□□□ -1.22
TRAPPC9-204ENST00000518723 CCL20P78556 96 aa7.41□□□□□ -1.22
TRAPPC9-204ENST00000518723 RPL18AQ02543 176 aaKnown RBP7.41□□□□□ -1.22
TRAPPC9-204ENST00000518723 TSKUQ8WUA8 353 aa7.41□□□□□ -1.22
TRAPPC9-204ENST00000518723 BIN3Q9NQY0 253 aa7.41□□□□□ -1.22
TRAPPC9-204ENST00000518723 RAB19A4D1S5 217 aa7.4□□□□□ -1.22
TRAPPC9-204ENST00000518723 COX7A2LO14548 114 aa7.4□□□□□ -1.22
TRAPPC9-204ENST00000518723 BCL2L11O43521 198 aa7.4□□□□□ -1.22
TRAPPC9-204ENST00000518723 PMCHP20382 165 aa7.4□□□□□ -1.22
TRAPPC9-204ENST00000518723 MALP21145 153 aa7.4□□□□□ -1.22
TRAPPC9-204ENST00000518723 RNF151Q2KHN1 245 aa7.4□□□□□ -1.22
TRAPPC9-204ENST00000518723 MRAP2Q96G30 205 aa7.4□□□□□ -1.22
TRAPPC9-204ENST00000518723 A0A087WZ39 114 aa7.39□□□□□ -1.23
TRAPPC9-204ENST00000518723 TRAV1-1A0A0B4J248 108 aa7.39□□□□□ -1.23
TRAPPC9-204ENST00000518723 C1orf196B1AJZ1 125 aa7.39□□□□□ -1.23
TRAPPC9-204ENST00000518723 TSHBP01222 138 aa7.39□□□□□ -1.23
TRAPPC9-204ENST00000518723 UBE2D1P51668 147 aa7.39□□□□□ -1.23
TRAPPC9-204ENST00000518723 SMIM15Q7Z3B0 74 aa7.39□□□□□ -1.23
TRAPPC9-204ENST00000518723 KRTAP11-1Q8IUC1 163 aa7.39□□□□□ -1.23
TRAPPC9-204ENST00000518723 GNG13Q9P2W3 67 aa7.39□□□□□ -1.23
TRAPPC9-204ENST00000518723 TRBV20OR9-2A0A075B6H5 130 aa7.38□□□□□ -1.23
TRAPPC9-204ENST00000518723 FOXA3P55318 350 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC9-204ENST00000518723 NUDT10Q8NFP7 164 aa7.38□□□□□ -1.23
TRAPPC9-204ENST00000518723 NUDT11Q96G61 164 aa7.38□□□□□ -1.23
TRAPPC9-204ENST00000518723 ZNF345Q14585 488 aa7.37□□□□□ -1.23
TRAPPC9-204ENST00000518723 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC9-204ENST00000518723 RPP21Q9H633 154 aaKnown RBP7.37□□□□□ -1.23
TRAPPC9-204ENST00000518723 TMEM242Q9NWH2 141 aa7.37□□□□□ -1.23
TRAPPC9-204ENST00000518723 CARHSP1Q9Y2V2 147 aaKnown RBP7.37□□□□□ -1.23
TRAPPC9-204ENST00000518723 C7orf77A4D0Y5 90 aa7.36□□□□□ -1.23
TRAPPC9-204ENST00000518723 PDE6DO43924 150 aa7.36□□□□□ -1.23
TRAPPC9-204ENST00000518723 MRPL35Q9NZE8 188 aaKnown RBP7.36□□□□□ -1.23
TRAPPC9-204ENST00000518723 CSDC2Q9Y534 153 aaKnown RBP7.36□□□□□ -1.23
TRAPPC9-204ENST00000518723 TRBV27A0A0K0K1C4 114 aa7.35□□□□□ -1.23
TRAPPC9-204ENST00000518723 POLR2KP53803 58 aaKnown RBP7.35□□□□□ -1.23
TRAPPC9-204ENST00000518723 SPAG11BQ08648 103 aa7.35□□□□□ -1.23
TRAPPC9-204ENST00000518723 IMMP2LQ96T52 175 aa7.35□□□□□ -1.23
TRAPPC9-204ENST00000518723 ST20Q9HBF5 79 aa7.35□□□□□ -1.23
TRAPPC9-204ENST00000518723 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
TRAPPC9-204ENST00000518723 F8WDY8 70 aa7.34□□□□□ -1.23
TRAPPC9-204ENST00000518723 TLX1NBP0CAT3 122 aa7.34□□□□□ -1.23
TRAPPC9-204ENST00000518723 C5orf38Q86SI9 138 aa7.34□□□□□ -1.23
TRAPPC9-204ENST00000518723 OR10D4PQ8NGN7 298 aa7.34□□□□□ -1.23
TRAPPC9-204ENST00000518723 RNASE7Q9H1E1 156 aaKnown RBP7.34□□□□□ -1.23
TRAPPC9-204ENST00000518723 MED9Q9NWA0 146 aa7.34□□□□□ -1.23
TRAPPC9-204ENST00000518723 TRAV13-1A0A0B4J241 112 aa7.32□□□□□ -1.24
TRAPPC9-204ENST00000518723 SMAGPQ0VAQ4 97 aa7.32□□□□□ -1.24
TRAPPC9-204ENST00000518723 FAM19A5Q7Z5A7 132 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC9-204ENST00000518723 UBE2D4Q9Y2X8 147 aa7.32□□□□□ -1.24
TRAPPC9-204ENST00000518723 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
TRAPPC9-204ENST00000518723 SMLR1H3BR10 107 aa7.31□□□□□ -1.24
TRAPPC9-204ENST00000518723 TEX46H3BTG2 121 aa7.31□□□□□ -1.24
TRAPPC9-204ENST00000518723 K7EN84 100 aa7.31□□□□□ -1.24
TRAPPC9-204ENST00000518723 KRTAP7-1Q8IUC3 87 aa7.31□□□□□ -1.24
TRAPPC9-204ENST00000518723 KANTRA0A1W2PQU2 76 aa7.3□□□□□ -1.24
TRAPPC9-204ENST00000518723 HMSDA8MTL9 139 aa7.3□□□□□ -1.24
TRAPPC9-204ENST00000518723 M0QXV9 152 aa7.3□□□□□ -1.24
TRAPPC9-204ENST00000518723 NDUFA1O15239 70 aa7.3□□□□□ -1.24
TRAPPC9-204ENST00000518723 TSPAN13O95857 204 aa7.3□□□□□ -1.24
TRAPPC9-204ENST00000518723 UBE2BP63146 152 aa7.3□□□□□ -1.24
TRAPPC9-204ENST00000518723 TMEM241Q24JQ0 296 aa7.3□□□□□ -1.24
TRAPPC9-204ENST00000518723 RNASE13Q5GAN3 156 aaKnown RBP7.3□□□□□ -1.24
TRAPPC9-204ENST00000518723 SMDT1Q9H4I9 107 aa7.3□□□□□ -1.24
TRAPPC9-204ENST00000518723 VCYO14598 125 aa7.29□□□□□ -1.24
TRAPPC9-204ENST00000518723 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
TRAPPC9-204ENST00000518723 Q6ZUT4 128 aa7.29□□□□□ -1.24
TRAPPC9-204ENST00000518723 OCC1Q8TAD7 63 aa7.29□□□□□ -1.24
TRAPPC9-204ENST00000518723 ORAOV1Q8WV07 137 aa7.29□□□□□ -1.24
TRAPPC9-204ENST00000518723 TIMM21Q9BVV7 248 aa7.29□□□□□ -1.24
TRAPPC9-204ENST00000518723 TMEM191AQ9H0A3 160 aa7.29□□□□□ -1.24
TRAPPC9-204ENST00000518723 C6orf48Q9UBA6 75 aa7.29□□□□□ -1.24
TRAPPC9-204ENST00000518723 IGHV3OR16-9A0A0B4J2B5 98 aa7.28□□□□□ -1.24
TRAPPC9-204ENST00000518723 A8MWL6 223 aa7.28□□□□□ -1.24
TRAPPC9-204ENST00000518723 ZNF861PO60384 105 aa7.28□□□□□ -1.24
TRAPPC9-204ENST00000518723 FCER1GP30273 86 aa7.28□□□□□ -1.24
TRAPPC9-204ENST00000518723 UNQ6190/PRO20217Q6UXQ8 127 aa7.28□□□□□ -1.24
TRAPPC9-204ENST00000518723 RAB4AP20338 218 aa7.27□□□□□ -1.25
TRAPPC9-204ENST00000518723 GAGE2EQ4V326 116 aa7.27□□□□□ -1.25
TRAPPC9-204ENST00000518723 GAGE2DQ9UEU5 116 aa7.27□□□□□ -1.25
TRAPPC9-204ENST00000518723 GATCO43716 136 aaKnown RBP7.26□□□□□ -1.25
TRAPPC9-204ENST00000518723 TAGLN2P37802 199 aaKnown RBP7.26□□□□□ -1.25
TRAPPC9-204ENST00000518723 CT83Q5H943 113 aa7.26□□□□□ -1.25
TRAPPC9-204ENST00000518723 FAM231DQ6ZW35 169 aa7.26□□□□□ -1.25
TRAPPC9-204ENST00000518723 BORCS7Q96B45 105 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms