RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 NUP35Q8NFH5 326 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 DIRC1Q969H9 104 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 CNFNQ9BYD5 112 aa6.84□□□□□ -1.31
CTNNA1-205ENST00000517904 MUC17Q685J3 4493 aa6.84□□□□□ -1.32
CTNNA1-205ENST00000517904 XKRY2A2RUG3 117 aa6.83□□□□□ -1.32
CTNNA1-205ENST00000517904 H0Y9J4 135 aa6.83□□□□□ -1.32
CTNNA1-205ENST00000517904 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-205ENST00000517904 ISOC2Q96AB3 205 aa6.83□□□□□ -1.32
CTNNA1-205ENST00000517904 BTF3L4Q96K17 158 aa6.83□□□□□ -1.32
CTNNA1-205ENST00000517904 TRBV20OR9-2A0A075B6H5 130 aa6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 IGLV1-50A0A075B6I6 118 aa6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 APOMO95445 188 aa6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 H2AFB1P0C5Y9 115 aa6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 ESDP10768 282 aa6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 CCL20P78556 96 aa6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 RPL18AQ02543 176 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 SS18Q15532 418 aa6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 TMEM101Q96IK0 257 aa6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 CDC42SE2Q9NRR3 84 aa6.82□□□□□ -1.32
CTNNA1-205ENST00000517904 UMAD1C9J7I0 102 aa6.81□□□□□ -1.32
CTNNA1-205ENST00000517904 TSHBP01222 138 aa6.81□□□□□ -1.32
CTNNA1-205ENST00000517904 GNG4P50150 75 aa6.81□□□□□ -1.32
CTNNA1-205ENST00000517904 EIF5AP63241 154 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-205ENST00000517904 EIF5AL1Q6IS14 154 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-205ENST00000517904 CAMK2N2Q96S95 79 aa6.81□□□□□ -1.32
CTNNA1-205ENST00000517904 I3L3M4 83 aa6.8□□□□□ -1.32
CTNNA1-205ENST00000517904 BCL2L11O43521 198 aa6.8□□□□□ -1.32
CTNNA1-205ENST00000517904 MALP21145 153 aa6.8□□□□□ -1.32
CTNNA1-205ENST00000517904 NUDT10Q8NFP7 164 aa6.8□□□□□ -1.32
CTNNA1-205ENST00000517904 SMIM12Q96EX1 92 aa6.8□□□□□ -1.32
CTNNA1-205ENST00000517904 NUDT11Q96G61 164 aa6.8□□□□□ -1.32
CTNNA1-205ENST00000517904 OPRPNQ99935 248 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-205ENST00000517904 GNG13Q9P2W3 67 aa6.8□□□□□ -1.32
CTNNA1-205ENST00000517904 A0A087WZ39 114 aa6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 FAM168BA1KXE4 195 aa6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 SMLR1H3BR10 107 aa6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 COX7A2LO14548 114 aa6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 PMCHP20382 165 aa6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 MRPL52Q86TS9 123 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 MRAP2Q96G30 205 aa6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 C2orf48Q96LS8 159 aa6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 MANBALQ9NQG1 85 aa6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 TMEM242Q9NWH2 141 aa6.79□□□□□ -1.32
CTNNA1-205ENST00000517904 TRBV6-5A0A0K0K1A5 114 aa6.78□□□□□ -1.32
CTNNA1-205ENST00000517904 TEX261Q6UWH6 196 aa6.78□□□□□ -1.32
CTNNA1-205ENST00000517904 RNASE7Q9H1E1 156 aaKnown RBP6.78□□□□□ -1.32
CTNNA1-205ENST00000517904 C1orf196B1AJZ1 125 aa6.77□□□□□ -1.33
CTNNA1-205ENST00000517904 UBE2D1P51668 147 aa6.76□□□□□ -1.33
CTNNA1-205ENST00000517904 ZNF345Q14585 488 aa6.76□□□□□ -1.33
CTNNA1-205ENST00000517904 RNASE13Q5GAN3 156 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-205ENST00000517904 C5orf38Q86SI9 138 aa6.76□□□□□ -1.33
CTNNA1-205ENST00000517904 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
CTNNA1-205ENST00000517904 RPP21Q9H633 154 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-205ENST00000517904 MED9Q9NWA0 146 aa6.76□□□□□ -1.33
CTNNA1-205ENST00000517904 TRAV1-1A0A0B4J248 108 aa6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 C7orf77A4D0Y5 90 aa6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 K7EN84 100 aa6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 RPL13AP40429 203 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 POLR2KP53803 58 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 SPAG11BQ08648 103 aa6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 SMIM15Q7Z3B0 74 aa6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 ST20Q9HBF5 79 aa6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 BIN3Q9NQY0 253 aa6.75□□□□□ -1.33
CTNNA1-205ENST00000517904 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
CTNNA1-205ENST00000517904 TRBV27A0A0K0K1C4 114 aa6.74□□□□□ -1.33
CTNNA1-205ENST00000517904 PDE6DO43924 150 aa6.74□□□□□ -1.33
CTNNA1-205ENST00000517904 FAM19A5Q7Z5A7 132 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-205ENST00000517904 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
CTNNA1-205ENST00000517904 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-205ENST00000517904 TSPAN13O95857 204 aa6.73□□□□□ -1.33
CTNNA1-205ENST00000517904 C10orf25Q5T742 122 aa6.73□□□□□ -1.33
CTNNA1-205ENST00000517904 MRPL35Q9NZE8 188 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-205ENST00000517904 UBE2D4Q9Y2X8 147 aa6.73□□□□□ -1.33
CTNNA1-205ENST00000517904 OR10D4PQ8NGN7 298 aa6.72□□□□□ -1.33
CTNNA1-205ENST00000517904 OCC1Q8TAD7 63 aa6.72□□□□□ -1.33
CTNNA1-205ENST00000517904 FAM210AQ96ND0 272 aa6.72□□□□□ -1.33
CTNNA1-205ENST00000517904 IMMP2LQ96T52 175 aa6.72□□□□□ -1.33
CTNNA1-205ENST00000517904 CSDC2Q9Y534 153 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-205ENST00000517904 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
CTNNA1-205ENST00000517904 KANTRA0A1W2PQU2 76 aa6.71□□□□□ -1.34
CTNNA1-205ENST00000517904 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.34
CTNNA1-205ENST00000517904 Q6ZUT4 128 aa6.71□□□□□ -1.34
CTNNA1-205ENST00000517904 CARHSP1Q9Y2V2 147 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-205ENST00000517904 HMSDA8MTL9 139 aa6.7□□□□□ -1.34
CTNNA1-205ENST00000517904 M0QXV9 152 aa6.7□□□□□ -1.34
CTNNA1-205ENST00000517904 UBE2BP63146 152 aa6.7□□□□□ -1.34
CTNNA1-205ENST00000517904 GAGE2EQ4V326 116 aa6.7□□□□□ -1.34
CTNNA1-205ENST00000517904 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
CTNNA1-205ENST00000517904 ORAOV1Q8WV07 137 aa6.7□□□□□ -1.34
CTNNA1-205ENST00000517904 SMDT1Q9H4I9 107 aa6.7□□□□□ -1.34
CTNNA1-205ENST00000517904 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
CTNNA1-205ENST00000517904 GAGE2DQ9UEU5 116 aa6.7□□□□□ -1.34
CTNNA1-205ENST00000517904 NDUFA1O15239 70 aa6.69□□□□□ -1.34
CTNNA1-205ENST00000517904 RAB4AP20338 218 aa6.69□□□□□ -1.34
CTNNA1-205ENST00000517904 FAM104AQ969W3 186 aa6.69□□□□□ -1.34
CTNNA1-205ENST00000517904 TMEM191AQ9H0A3 160 aa6.69□□□□□ -1.34
CTNNA1-205ENST00000517904 A0A087X002 238 aa6.68□□□□□ -1.34
CTNNA1-205ENST00000517904 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
CTNNA1-205ENST00000517904 F8WDY8 70 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms