RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 MRAP2Q96G30 205 aa9.67□□□□□ -0.86
HMGCLL1-209ENST00000515546 MRPL18Q9H0U6 180 aaKnown RBP9.67□□□□□ -0.86
HMGCLL1-209ENST00000515546 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
HMGCLL1-209ENST00000515546 D6R8Y8 96 aa9.66□□□□□ -0.86
HMGCLL1-209ENST00000515546 UBE2L6O14933 153 aa9.66□□□□□ -0.86
HMGCLL1-209ENST00000515546 APCSP02743 223 aa9.66□□□□□ -0.86
HMGCLL1-209ENST00000515546 KIAA1644Q3SXP7 199 aa9.66□□□□□ -0.86
HMGCLL1-209ENST00000515546 LINC01620Q4KN68 170 aa9.66□□□□□ -0.86
HMGCLL1-209ENST00000515546 NRACQ8N912 160 aa9.66□□□□□ -0.86
HMGCLL1-209ENST00000515546 TRAPPC1Q9Y5R8 145 aa9.66□□□□□ -0.86
HMGCLL1-209ENST00000515546 H7C423 109 aa9.65□□□□□ -0.86
HMGCLL1-209ENST00000515546 MYCBP2O75592 4640 aa9.65□□□□□ -0.86
HMGCLL1-209ENST00000515546 I3L3M4 83 aa9.64□□□□□ -0.87
HMGCLL1-209ENST00000515546 PHOX2AO14813 284 aa9.64□□□□□ -0.87
HMGCLL1-209ENST00000515546 SMR3BP02814 79 aaPredicted RBP9.64□□□□□ -0.87
HMGCLL1-209ENST00000515546 FABP9Q0Z7S8 132 aa9.64□□□□□ -0.87
HMGCLL1-209ENST00000515546 IGLV10-54A0A075B6I4 117 aa9.63□□□□□ -0.87
HMGCLL1-209ENST00000515546 TSHBP01222 138 aa9.63□□□□□ -0.87
HMGCLL1-209ENST00000515546 NPYP01303 97 aa9.63□□□□□ -0.87
HMGCLL1-209ENST00000515546 PRSS1P07477 247 aa9.63□□□□□ -0.87
HMGCLL1-209ENST00000515546 CKS2P33552 79 aa9.63□□□□□ -0.87
HMGCLL1-209ENST00000515546 ORMDL3Q8N138 153 aa9.63□□□□□ -0.87
HMGCLL1-209ENST00000515546 ST20Q9HBF5 79 aa9.63□□□□□ -0.87
HMGCLL1-209ENST00000515546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
HMGCLL1-209ENST00000515546 TRBV27A0A0K0K1C4 114 aa9.62□□□□□ -0.87
HMGCLL1-209ENST00000515546 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
HMGCLL1-209ENST00000515546 PPBPP02775 128 aa9.62□□□□□ -0.87
HMGCLL1-209ENST00000515546 TRGC2P03986 189 aa9.62□□□□□ -0.87
HMGCLL1-209ENST00000515546 ESDP10768 282 aa9.62□□□□□ -0.87
HMGCLL1-209ENST00000515546 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
HMGCLL1-209ENST00000515546 PRELID3AQ96N28 172 aa9.62□□□□□ -0.87
HMGCLL1-209ENST00000515546 TNFRSF6BO95407 300 aa9.61□□□□□ -0.87
HMGCLL1-209ENST00000515546 FGF6P10767 208 aa9.61□□□□□ -0.87
HMGCLL1-209ENST00000515546 PMCHP20382 165 aa9.61□□□□□ -0.87
HMGCLL1-209ENST00000515546 AMMECR1LQ6DCA0 310 aa9.61□□□□□ -0.87
HMGCLL1-209ENST00000515546 DGAT2L7PQ6IED9 249 aa9.61□□□□□ -0.87
HMGCLL1-209ENST00000515546 SCXQ7RTU7 201 aa9.61□□□□□ -0.87
HMGCLL1-209ENST00000515546 ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
HMGCLL1-209ENST00000515546 FAM229AH3BQW9 127 aa9.6□□□□□ -0.87
HMGCLL1-209ENST00000515546 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
HMGCLL1-209ENST00000515546 CHAC1Q9BUX1 264 aa9.6□□□□□ -0.87
HMGCLL1-209ENST00000515546 PPP1R17O96001 155 aa9.59□□□□□ -0.87
HMGCLL1-209ENST00000515546 INAFM2P0DMQ5 153 aa9.59□□□□□ -0.87
HMGCLL1-209ENST00000515546 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
HMGCLL1-209ENST00000515546 SUMO2P61956 95 aaKnown RBP9.58□□□□□ -0.88
HMGCLL1-209ENST00000515546 RNASEKQ6P5S7 137 aaKnown RBP9.58□□□□□ -0.88
HMGCLL1-209ENST00000515546 MRPL52Q86TS9 123 aaKnown RBP9.58□□□□□ -0.88
HMGCLL1-209ENST00000515546 C9orf163Q8N9P6 203 aa9.58□□□□□ -0.88
HMGCLL1-209ENST00000515546 LAMTOR2Q9Y2Q5 125 aa9.58□□□□□ -0.88
HMGCLL1-209ENST00000515546 DMBT1Q9UGM3 2413 aaPredicted RBP9.58□□□□□ -0.88
HMGCLL1-209ENST00000515546 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
HMGCLL1-209ENST00000515546 C15orf56Q8N910 161 aa9.57□□□□□ -0.88
HMGCLL1-209ENST00000515546 C20orf78Q9BR46 151 aa9.57□□□□□ -0.88
HMGCLL1-209ENST00000515546 hDV102S1A0JD36 115 aa9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 GAGE12HA6NDE8 117 aa9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 PRSS47A8MTI9 375 aa9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 VCYO14598 125 aa9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 OR5A1Q8NGJ0 315 aa9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 CIRBP-AS1Q8TBR5 109 aa9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 C18orf32Q8TCD1 76 aa9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 CHCHD10Q8WYQ3 142 aaPredicted RBP9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 SMIM2Q9BVW6 85 aa9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 HERC1Q15751 4861 aa9.56□□□□□ -0.88
HMGCLL1-209ENST00000515546 IGKV3OR2-268A0A0C4DH90 116 aa9.55□□□□□ -0.88
HMGCLL1-209ENST00000515546 LOC389332A0A1B0GUA5 103 aa9.55□□□□□ -0.88
HMGCLL1-209ENST00000515546 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
HMGCLL1-209ENST00000515546 MAP1LC3AQ9H492 121 aa9.55□□□□□ -0.88
HMGCLL1-209ENST00000515546 FLG2Q5D862 2391 aaPredicted RBP9.55□□□□□ -0.88
HMGCLL1-209ENST00000515546 FOXI1Q12951 378 aa9.54□□□□□ -0.88
HMGCLL1-209ENST00000515546 SDIM1Q6ZPB5 146 aa9.54□□□□□ -0.88
HMGCLL1-209ENST00000515546 URB1-AS1Q96HZ7 61 aa9.54□□□□□ -0.88
HMGCLL1-209ENST00000515546 CDC42SE2Q9NRR3 84 aa9.54□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST1H2BKO60814 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 SLPIP03973 132 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST1H2BJP06899 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST1H2BOP23527 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 FCER1GP30273 86 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST1H2BBP33778 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 IFI27P40305 119 aaPredicted RBP9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST1H2BDP58876 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST1H2BCP62807 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST2H2BEQ16778 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST1H2BHQ93079 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 KIR2DL4Q99706 377 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST1H2BNQ99877 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 HIST1H2BMQ99879 126 aa9.53□□□□□ -0.88
HMGCLL1-209ENST00000515546 GVQW2A0A096LPI5 108 aaPredicted RBP9.52□□□□□ -0.89
HMGCLL1-209ENST00000515546 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.89
HMGCLL1-209ENST00000515546 KRTAP10-4P60372 401 aaPredicted RBP9.52□□□□□ -0.89
HMGCLL1-209ENST00000515546 CIRBPQ14011 172 aaKnown RBP9.52□□□□□ -0.89
HMGCLL1-209ENST00000515546 CFAP161Q6P656 301 aa9.52□□□□□ -0.89
HMGCLL1-209ENST00000515546 Q8N8P6 123 aa9.52□□□□□ -0.89
HMGCLL1-209ENST00000515546 CSDC2Q9Y534 153 aaKnown RBP9.52□□□□□ -0.89
HMGCLL1-209ENST00000515546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.52□□□□□ -0.89
HMGCLL1-209ENST00000515546 PANO1I0J062 215 aa9.51□□□□□ -0.89
HMGCLL1-209ENST00000515546 TCAPO15273 167 aa9.51□□□□□ -0.89
HMGCLL1-209ENST00000515546 LINC00310P59036 64 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms