RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 AMN1Q8IY45 258 aa6.56□□□□□ -1.36
NEDD9-215ENST00000514660 AP1S3Q96PC3 154 aa6.56□□□□□ -1.36
NEDD9-215ENST00000514660 GNB1LQ9BYB4 327 aa6.56□□□□□ -1.36
NEDD9-215ENST00000514660 CIDEAO60543 219 aa6.55□□□□□ -1.36
NEDD9-215ENST00000514660 SLPIP03973 132 aa6.55□□□□□ -1.36
NEDD9-215ENST00000514660 S100A8P05109 93 aa6.55□□□□□ -1.36
NEDD9-215ENST00000514660 SMIM17P0DL12 118 aa6.55□□□□□ -1.36
NEDD9-215ENST00000514660 RAB4BP61018 213 aa6.55□□□□□ -1.36
NEDD9-215ENST00000514660 MRPL51Q4U2R6 128 aaKnown RBP6.55□□□□□ -1.36
NEDD9-215ENST00000514660 FAM74A4Q5TZK3 123 aa6.55□□□□□ -1.36
NEDD9-215ENST00000514660 DGAT2L7PQ6IED9 249 aa6.55□□□□□ -1.36
NEDD9-215ENST00000514660 SMIM15Q7Z3B0 74 aa6.55□□□□□ -1.36
NEDD9-215ENST00000514660 F5H697 171 aa6.54□□□□□ -1.36
NEDD9-215ENST00000514660 MGPP08493 103 aa6.54□□□□□ -1.36
NEDD9-215ENST00000514660 SRSF9Q13242 221 aaKnown RBP eCLIP6.54□□□□□ -1.36
NEDD9-215ENST00000514660 COX19Q49B96 90 aa6.54□□□□□ -1.36
NEDD9-215ENST00000514660 C14orf177Q52M58 125 aa6.54□□□□□ -1.36
NEDD9-215ENST00000514660 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
NEDD9-215ENST00000514660 PLAC8Q9NZF1 115 aa6.54□□□□□ -1.36
NEDD9-215ENST00000514660 TRAV26-2A0A0B4J265 109 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 SMKR1H3BMG3 65 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 M0QY20 66 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 RHODO00212 210 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 HLA-DQA1P01909 254 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 APCSP02743 223 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 RAB5AP20339 215 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 KIAA1644Q3SXP7 199 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 SUMO4Q6EEV6 95 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 TRAPPC1Q9Y5R8 145 aa6.53□□□□□ -1.36
NEDD9-215ENST00000514660 A0A0U1RQV1 116 aa6.52□□□□□ -1.37
NEDD9-215ENST00000514660 RPS10P46783 165 aaKnown RBP6.52□□□□□ -1.37
NEDD9-215ENST00000514660 FABP9Q0Z7S8 132 aa6.52□□□□□ -1.37
NEDD9-215ENST00000514660 ZNF56Q15929 161 aa6.52□□□□□ -1.37
NEDD9-215ENST00000514660 AP5S1Q9NUS5 200 aa6.52□□□□□ -1.37
NEDD9-215ENST00000514660 D6R8Y8 96 aa6.51□□□□□ -1.37
NEDD9-215ENST00000514660 NCR2O95944 276 aa6.51□□□□□ -1.37
NEDD9-215ENST00000514660 MT-ND6P03923 174 aa6.51□□□□□ -1.37
NEDD9-215ENST00000514660 TRGC2P03986 189 aa6.51□□□□□ -1.37
NEDD9-215ENST00000514660 NRACQ8N912 160 aa6.51□□□□□ -1.37
NEDD9-215ENST00000514660 RPL39LQ96EH5 51 aaKnown RBP6.51□□□□□ -1.37
NEDD9-215ENST00000514660 MRAP2Q96G30 205 aa6.51□□□□□ -1.37
NEDD9-215ENST00000514660 C1orf43Q9BWL3 253 aa6.51□□□□□ -1.37
NEDD9-215ENST00000514660 CKS2P33552 79 aa6.5□□□□□ -1.37
NEDD9-215ENST00000514660 SPINK6Q6UWN8 80 aa6.5□□□□□ -1.37
NEDD9-215ENST00000514660 NEXN-AS1Q8NBZ9 246 aa6.5□□□□□ -1.37
NEDD9-215ENST00000514660 ALKBH7Q9BT30 221 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-215ENST00000514660 NIT2Q9NQR4 276 aa6.5□□□□□ -1.37
NEDD9-215ENST00000514660 TNFRSF6BO95407 300 aa6.49□□□□□ -1.37
NEDD9-215ENST00000514660 NPYP01303 97 aa6.49□□□□□ -1.37
NEDD9-215ENST00000514660 PPBPP02775 128 aa6.49□□□□□ -1.37
NEDD9-215ENST00000514660 ORMDL3Q8N138 153 aa6.49□□□□□ -1.37
NEDD9-215ENST00000514660 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-215ENST00000514660 PRELID3AQ96N28 172 aa6.49□□□□□ -1.37
NEDD9-215ENST00000514660 TRBV10-1A0A0K0K1A3 114 aa6.48□□□□□ -1.37
NEDD9-215ENST00000514660 TRBV6-5A0A0K0K1A5 114 aa6.48□□□□□ -1.37
NEDD9-215ENST00000514660 PRSS47A8MTI9 375 aa6.48□□□□□ -1.37
NEDD9-215ENST00000514660 H7C1H1 209 aa6.48□□□□□ -1.37
NEDD9-215ENST00000514660 POLR2KP53803 58 aaKnown RBP6.48□□□□□ -1.37
NEDD9-215ENST00000514660 CNBPP62633 177 aaKnown RBP6.48□□□□□ -1.37
NEDD9-215ENST00000514660 REG3GQ6UW15 175 aa6.48□□□□□ -1.37
NEDD9-215ENST00000514660 DPH3Q96FX2 82 aa6.48□□□□□ -1.37
NEDD9-215ENST00000514660 TRBV7-3A0A075B6L6 115 aa6.47□□□□□ -1.37
NEDD9-215ENST00000514660 UBE2D3P61077 147 aa6.47□□□□□ -1.37
NEDD9-215ENST00000514660 UBE2D2P62837 147 aa6.47□□□□□ -1.37
NEDD9-215ENST00000514660 Q0VG73 95 aa6.47□□□□□ -1.37
NEDD9-215ENST00000514660 MPV17L2Q567V2 206 aa6.47□□□□□ -1.37
NEDD9-215ENST00000514660 C7orf33Q8WU49 177 aa6.47□□□□□ -1.37
NEDD9-215ENST00000514660 A0A087WX48 190 aa6.46□□□□□ -1.38
NEDD9-215ENST00000514660 PPP1R17O96001 155 aa6.46□□□□□ -1.38
NEDD9-215ENST00000514660 SUMO2P61956 95 aaKnown RBP6.46□□□□□ -1.38
NEDD9-215ENST00000514660 RPL36AP83881 106 aaKnown RBP6.46□□□□□ -1.38
NEDD9-215ENST00000514660 RPL36ALQ969Q0 106 aaKnown RBP6.46□□□□□ -1.38
NEDD9-215ENST00000514660 C20orf78Q9BR46 151 aa6.46□□□□□ -1.38
NEDD9-215ENST00000514660 CHCHD7Q9BUK0 85 aa6.46□□□□□ -1.38
NEDD9-215ENST00000514660 ST20Q9HBF5 79 aa6.46□□□□□ -1.38
NEDD9-215ENST00000514660 LOC389332A0A1B0GUA5 103 aa6.45□□□□□ -1.38
NEDD9-215ENST00000514660 SDHAF1A6NFY7 115 aa6.45□□□□□ -1.38
NEDD9-215ENST00000514660 RPL32P62910 135 aaKnown RBP6.45□□□□□ -1.38
NEDD9-215ENST00000514660 IQCJQ1A5X6 159 aa6.45□□□□□ -1.38
NEDD9-215ENST00000514660 CLPSL2Q6UWE3 100 aa6.45□□□□□ -1.38
NEDD9-215ENST00000514660 C18orf32Q8TCD1 76 aa6.45□□□□□ -1.38
NEDD9-215ENST00000514660 LAMTOR2Q9Y2Q5 125 aa6.45□□□□□ -1.38
NEDD9-215ENST00000514660 IGHV3-64A0A075B6Q5 118 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 TRBV27A0A0K0K1C4 114 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 VCYO14598 125 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST1H2BKO60814 126 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST1H2BJP06899 126 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST1H2BOP23527 126 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST1H2BBP33778 126 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 IFI27P40305 119 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST1H2BDP58876 126 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST1H2BCP62807 126 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST2H2BEQ16778 126 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-215ENST00000514660 NTM-AS1Q6ZSK4 140 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 PRSS3P2Q8NHM4 247 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST1H2BHQ93079 126 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 URB1-AS1Q96HZ7 61 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST1H2BNQ99877 126 aa6.44□□□□□ -1.38
NEDD9-215ENST00000514660 HIST1H2BMQ99879 126 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms