RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 MRAP2Q96G30 205 aa8.4□□□□□ -1.06
PFDN1-206ENST00000514611 EIF5A2Q9GZV4 153 aaKnown RBP8.4□□□□□ -1.06
PFDN1-206ENST00000514611 ST20Q9HBF5 79 aa8.4□□□□□ -1.06
PFDN1-206ENST00000514611 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
PFDN1-206ENST00000514611 A0A1B0GUT8 65 aa8.39□□□□□ -1.07
PFDN1-206ENST00000514611 CCL25O15444 150 aa8.39□□□□□ -1.07
PFDN1-206ENST00000514611 Q6ZRU5 148 aa8.39□□□□□ -1.07
PFDN1-206ENST00000514611 TMEM101Q96IK0 257 aa8.39□□□□□ -1.07
PFDN1-206ENST00000514611 BTF3L4Q96K17 158 aa8.39□□□□□ -1.07
PFDN1-206ENST00000514611 TMEM191AQ9H0A3 160 aa8.39□□□□□ -1.07
PFDN1-206ENST00000514611 A0A096LNI7 61 aa8.38□□□□□ -1.07
PFDN1-206ENST00000514611 ZNF727A8MUV8 499 aa8.38□□□□□ -1.07
PFDN1-206ENST00000514611 SMKR1H3BMG3 65 aa8.38□□□□□ -1.07
PFDN1-206ENST00000514611 RAB4AP20338 218 aa8.38□□□□□ -1.07
PFDN1-206ENST00000514611 FAM210AQ96ND0 272 aa8.38□□□□□ -1.07
PFDN1-206ENST00000514611 C7orf77A4D0Y5 90 aa8.37□□□□□ -1.07
PFDN1-206ENST00000514611 SRP19P09132 144 aaKnown RBP8.37□□□□□ -1.07
PFDN1-206ENST00000514611 POLR2KP53803 58 aaKnown RBP8.37□□□□□ -1.07
PFDN1-206ENST00000514611 STPG4Q8N801 248 aa8.37□□□□□ -1.07
PFDN1-206ENST00000514611 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
PFDN1-206ENST00000514611 OSTCQ9NRP0 149 aa8.37□□□□□ -1.07
PFDN1-206ENST00000514611 V9GYV3 84 aa8.37□□□□□ -1.07
PFDN1-206ENST00000514611 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
PFDN1-206ENST00000514611 TRBV27A0A0K0K1C4 114 aa8.36□□□□□ -1.07
PFDN1-206ENST00000514611 MRPL52Q86TS9 123 aaKnown RBP8.36□□□□□ -1.07
PFDN1-206ENST00000514611 NUP35Q8NFH5 326 aa8.36□□□□□ -1.07
PFDN1-206ENST00000514611 CDC42SE2Q9NRR3 84 aa8.36□□□□□ -1.07
PFDN1-206ENST00000514611 PRR3P79522 188 aaKnown RBP8.35□□□□□ -1.07
PFDN1-206ENST00000514611 ZNF664Q8N3J9 261 aa8.35□□□□□ -1.07
PFDN1-206ENST00000514611 CARD19Q96LW7 228 aa8.35□□□□□ -1.07
PFDN1-206ENST00000514611 SS18Q15532 418 aa8.34□□□□□ -1.07
PFDN1-206ENST00000514611 RNASE13Q5GAN3 156 aaKnown RBP8.34□□□□□ -1.07
PFDN1-206ENST00000514611 CD164L2Q6UWJ8 174 aa8.34□□□□□ -1.07
PFDN1-206ENST00000514611 NRACQ8N912 160 aa8.34□□□□□ -1.07
PFDN1-206ENST00000514611 ISOC2Q96AB3 205 aa8.34□□□□□ -1.07
PFDN1-206ENST00000514611 FCER1GP30273 86 aa8.33□□□□□ -1.08
PFDN1-206ENST00000514611 RPL23P62829 140 aaKnown RBP8.33□□□□□ -1.08
PFDN1-206ENST00000514611 RIGQ13278 110 aa8.33□□□□□ -1.08
PFDN1-206ENST00000514611 UBE2D4Q9Y2X8 147 aa8.33□□□□□ -1.08
PFDN1-206ENST00000514611 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
PFDN1-206ENST00000514611 SUMO2P61956 95 aaKnown RBP8.32□□□□□ -1.08
PFDN1-206ENST00000514611 Q6ZUT4 128 aa8.32□□□□□ -1.08
PFDN1-206ENST00000514611 C9JQL5 133 aa8.31□□□□□ -1.08
PFDN1-206ENST00000514611 VCYO14598 125 aa8.31□□□□□ -1.08
PFDN1-206ENST00000514611 CAMPP49913 170 aa8.31□□□□□ -1.08
PFDN1-206ENST00000514611 SYCNQ0VAF6 134 aa8.31□□□□□ -1.08
PFDN1-206ENST00000514611 ADIRFQ15847 76 aa8.31□□□□□ -1.08
PFDN1-206ENST00000514611 MRPL51Q4U2R6 128 aaKnown RBP8.31□□□□□ -1.08
PFDN1-206ENST00000514611 NAT8BQ9UHF3 227 aa8.31□□□□□ -1.08
PFDN1-206ENST00000514611 IGLV4-69A0A075B6H9 119 aa8.3□□□□□ -1.08
PFDN1-206ENST00000514611 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
PFDN1-206ENST00000514611 A0A1B0GVG6 124 aa8.3□□□□□ -1.08
PFDN1-206ENST00000514611 TMEM241Q24JQ0 296 aa8.3□□□□□ -1.08
PFDN1-206ENST00000514611 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
PFDN1-206ENST00000514611 LINC00474Q9P2X8 69 aa8.3□□□□□ -1.08
PFDN1-206ENST00000514611 MALP21145 153 aa8.29□□□□□ -1.08
PFDN1-206ENST00000514611 SRSF3P84103 164 aaKnown RBP8.29□□□□□ -1.08
PFDN1-206ENST00000514611 ODF1Q14990 250 aa8.29□□□□□ -1.08
PFDN1-206ENST00000514611 FAM104BQ5XKR9 115 aa8.29□□□□□ -1.08
PFDN1-206ENST00000514611 PKIGQ9Y2B9 76 aa8.29□□□□□ -1.08
PFDN1-206ENST00000514611 CSDC2Q9Y534 153 aaKnown RBP8.29□□□□□ -1.08
PFDN1-206ENST00000514611 SMIM27A0A1W2PRY6 76 aa8.28□□□□□ -1.08
PFDN1-206ENST00000514611 C1orf196B1AJZ1 125 aa8.28□□□□□ -1.08
PFDN1-206ENST00000514611 COX7A2LO14548 114 aa8.28□□□□□ -1.08
PFDN1-206ENST00000514611 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
PFDN1-206ENST00000514611 PPP1R17O96001 155 aa8.28□□□□□ -1.08
PFDN1-206ENST00000514611 PTTG1IPP53801 180 aa8.28□□□□□ -1.08
PFDN1-206ENST00000514611 GAGE2BQ13066 116 aa8.28□□□□□ -1.08
PFDN1-206ENST00000514611 FAM74A3Q4VXF1 159 aa8.28□□□□□ -1.08
PFDN1-206ENST00000514611 NAT8Q9UHE5 227 aa8.28□□□□□ -1.08
PFDN1-206ENST00000514611 LRP2P98164 4655 aa8.27□□□□□ -1.08
PFDN1-206ENST00000514611 RPL39P62891 51 aaKnown RBP8.27□□□□□ -1.09
PFDN1-206ENST00000514611 C5orf38Q86SI9 138 aa8.27□□□□□ -1.09
PFDN1-206ENST00000514611 LINC01600Q96MT4 127 aa8.27□□□□□ -1.09
PFDN1-206ENST00000514611 CAMK2N2Q96S95 79 aa8.27□□□□□ -1.09
PFDN1-206ENST00000514611 LOC107984640A0A0U1RRK4 108 aa8.26□□□□□ -1.09
PFDN1-206ENST00000514611 SMAGPQ0VAQ4 97 aa8.26□□□□□ -1.09
PFDN1-206ENST00000514611 MRPL54Q6P161 138 aaKnown RBP8.26□□□□□ -1.09
PFDN1-206ENST00000514611 A0A1W2PNN7 141 aa8.25□□□□□ -1.09
PFDN1-206ENST00000514611 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.25□□□□□ -1.09
PFDN1-206ENST00000514611 TNFRSF6BO95407 300 aa8.25□□□□□ -1.09
PFDN1-206ENST00000514611 APOMO95445 188 aa8.25□□□□□ -1.09
PFDN1-206ENST00000514611 CKS2P33552 79 aa8.25□□□□□ -1.09
PFDN1-206ENST00000514611 SPAG11BQ08648 103 aa8.25□□□□□ -1.09
PFDN1-206ENST00000514611 C20orf78Q9BR46 151 aa8.25□□□□□ -1.09
PFDN1-206ENST00000514611 TRBV24-1A0A075B6N3 115 aa8.24□□□□□ -1.09
PFDN1-206ENST00000514611 LINC00862A6NCI5 91 aa8.24□□□□□ -1.09
PFDN1-206ENST00000514611 D6R8Y8 96 aa8.24□□□□□ -1.09
PFDN1-206ENST00000514611 RPL18AQ02543 176 aaKnown RBP8.24□□□□□ -1.09
PFDN1-206ENST00000514611 SPINK6Q6UWN8 80 aa8.24□□□□□ -1.09
PFDN1-206ENST00000514611 Q6ZRP5 223 aa8.24□□□□□ -1.09
PFDN1-206ENST00000514611 FAM104AQ969W3 186 aa8.24□□□□□ -1.09
PFDN1-206ENST00000514611 TMEM18Q96B42 140 aa8.24□□□□□ -1.09
PFDN1-206ENST00000514611 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
PFDN1-206ENST00000514611 TIMM21Q9BVV7 248 aa8.24□□□□□ -1.09
PFDN1-206ENST00000514611 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
PFDN1-206ENST00000514611 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
PFDN1-206ENST00000514611 A0A1B0GW15 77 aa8.23□□□□□ -1.09
PFDN1-206ENST00000514611 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
PFDN1-206ENST00000514611 TCAPO15273 167 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms