RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 KMT2AQ03164 3969 aa-0.11□□□□□ -2.43
HMGCS1-207ENST00000514610 NAA60Q9H7X0 242 aa-0.11□□□□□ -2.43
HMGCS1-207ENST00000514610 NSD1Q96L73 2696 aaPredicted RBP-0.12□□□□□ -2.43
HMGCS1-207ENST00000514610 SMIM4Q8WVI0 70 aa-0.12□□□□□ -2.43
HMGCS1-207ENST00000514610 PIEZO2Q9H5I5 2752 aa-0.12□□□□□ -2.43
HMGCS1-207ENST00000514610 RIMS1Q86UR5 1692 aaKnown RBP-0.13□□□□□ -2.43
HMGCS1-207ENST00000514610 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.13□□□□□ -2.43
HMGCS1-207ENST00000514610 NALCNQ8IZF0 1738 aa-0.13□□□□□ -2.43
HMGCS1-207ENST00000514610 CPSF1Q10570 1443 aaKnown RBP-0.13□□□□□ -2.43
HMGCS1-207ENST00000514610 TSC2P49815 1807 aa-0.14□□□□□ -2.43
HMGCS1-207ENST00000514610 LOC100130705A0A1B0GUX0 176 aa-0.14□□□□□ -2.43
HMGCS1-207ENST00000514610 BCE1O60756 84 aa-0.14□□□□□ -2.43
HMGCS1-207ENST00000514610 HMGN1P05114 100 aa-0.14□□□□□ -2.43
HMGCS1-207ENST00000514610 WFDC2Q14508 124 aa-0.14□□□□□ -2.43
HMGCS1-207ENST00000514610 TSLPQ969D9 159 aa-0.14□□□□□ -2.43
HMGCS1-207ENST00000514610 SPCS1Q9Y6A9 102 aa-0.14□□□□□ -2.43
HMGCS1-207ENST00000514610 Q5VSD8 79 aa-0.15□□□□□ -2.43
HMGCS1-207ENST00000514610 NAIPQ13075 1403 aa-0.15□□□□□ -2.43
HMGCS1-207ENST00000514610 TET3O43151 1660 aa-0.16□□□□□ -2.44
HMGCS1-207ENST00000514610 K7EP13 123 aa-0.16□□□□□ -2.44
HMGCS1-207ENST00000514610 BTG2P78543 158 aa-0.16□□□□□ -2.44
HMGCS1-207ENST00000514610 CATR1Q13166 79 aa-0.16□□□□□ -2.44
HMGCS1-207ENST00000514610 DEFB109BQ30KR1 87 aa-0.16□□□□□ -2.44
HMGCS1-207ENST00000514610 Q56UQ5 140 aa-0.16□□□□□ -2.44
HMGCS1-207ENST00000514610 Q8IZM0 81 aa-0.16□□□□□ -2.44
HMGCS1-207ENST00000514610 AMELXQ99217 191 aa-0.16□□□□□ -2.44
HMGCS1-207ENST00000514610 NDUFA4L2Q9NRX3 87 aa-0.16□□□□□ -2.44
HMGCS1-207ENST00000514610 LRP2P98164 4655 aa-0.17□□□□□ -2.44
HMGCS1-207ENST00000514610 S100A3P33764 101 aa-0.17□□□□□ -2.44
HMGCS1-207ENST00000514610 TMEM170BQ5T4T1 132 aa-0.17□□□□□ -2.44
HMGCS1-207ENST00000514610 CSPG4Q6UVK1 2322 aa-0.17□□□□□ -2.44
HMGCS1-207ENST00000514610 DCHS2Q6V1P9 2916 aa-0.17□□□□□ -2.44
HMGCS1-207ENST00000514610 FLNAP21333 2647 aaKnown RBP-0.17□□□□□ -2.44
HMGCS1-207ENST00000514610 KDM5AP29375 1690 aaKnown RBP-0.18□□□□□ -2.44
HMGCS1-207ENST00000514610 ALMS1Q8TCU4 4167 aa-0.18□□□□□ -2.44
HMGCS1-207ENST00000514610 COX17Q14061 63 aa-0.18□□□□□ -2.44
HMGCS1-207ENST00000514610 PPP3R2Q96LZ3 170 aa-0.18□□□□□ -2.44
HMGCS1-207ENST00000514610 PAPPAQ13219 1627 aa-0.18□□□□□ -2.44
HMGCS1-207ENST00000514610 BCL9LQ86UU0 1499 aa-0.18□□□□□ -2.44
HMGCS1-207ENST00000514610 ARHGEF5Q12774 1597 aa-0.19□□□□□ -2.44
HMGCS1-207ENST00000514610 GOLGA4Q13439 2230 aaKnown RBP-0.19□□□□□ -2.44
HMGCS1-207ENST00000514610 SPTA1P02549 2419 aa-0.19□□□□□ -2.44
HMGCS1-207ENST00000514610 MGST2Q99735 147 aa-0.19□□□□□ -2.44
HMGCS1-207ENST00000514610 TP53AIP1Q9HCN2 124 aa-0.19□□□□□ -2.44
HMGCS1-207ENST00000514610 DYNLRB1Q9NP97 96 aa-0.19□□□□□ -2.44
HMGCS1-207ENST00000514610 MYOM1P52179 1685 aa-0.19□□□□□ -2.44
HMGCS1-207ENST00000514610 HSPG2P98160 4391 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 MAP1BP46821 2468 aaKnown RBP-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 TRBV7-3A0A075B6L6 115 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 FXYD6-FXYD2A0A087WZ82 144 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 F8VRH5 84 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 APOC2P02655 101 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 FGF7P21781 194 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 SPRR2DP22532 72 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 TPPP2P59282 170 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 Q6JHZ5 121 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 BAGE2Q86Y30 109 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 C1orf54Q8WWF1 131 aa-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 ROCK2O75116 1388 aaKnown RBP-0.2□□□□□ -2.44
HMGCS1-207ENST00000514610 C10orf71Q711Q0 1435 aa-0.21□□□□□ -2.44
HMGCS1-207ENST00000514610 UQCR11O14957 56 aa-0.21□□□□□ -2.44
HMGCS1-207ENST00000514610 LINC00472Q9H8W2 130 aa-0.21□□□□□ -2.44
HMGCS1-207ENST00000514610 BSNQ9UPA5 3926 aa-0.21□□□□□ -2.44
HMGCS1-207ENST00000514610 A2ML1A8K2U0 1454 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 LOC285095A0A1B0GVY8 99 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 IGLC7A0M8Q6 106 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 I3L2K1 104 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 HMGN4O00479 90 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 SSSCA1O60232 199 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 APOC3P02656 99 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 AKAIN1P0CW23 69 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 SPRR1AP35321 89 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 DCDP81605 110 aaKnown RBP-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 C8orf59Q8N0T1 100 aaPredicted RBP-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 SPANXDQ9BXN6 97 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 SCN7AQ01118 1682 aa-0.22□□□□□ -2.44
HMGCS1-207ENST00000514610 KTN1Q86UP2 1357 aaKnown RBP-0.22□□□□□ -2.45
HMGCS1-207ENST00000514610 ATRQ13535 2644 aa-0.22□□□□□ -2.45
HMGCS1-207ENST00000514610 FAT2Q9NYQ8 4349 aa-0.23□□□□□ -2.45
HMGCS1-207ENST00000514610 OOSP1A8MZH6 123 aa-0.23□□□□□ -2.45
HMGCS1-207ENST00000514610 COMMD6Q7Z4G1 85 aa-0.23□□□□□ -2.45
HMGCS1-207ENST00000514610 C5orf38Q86SI9 138 aa-0.23□□□□□ -2.45
HMGCS1-207ENST00000514610 TNXBP22105 4242 aa-0.23□□□□□ -2.45
HMGCS1-207ENST00000514610 SHANK2Q9UPX8 1470 aa-0.23□□□□□ -2.45
HMGCS1-207ENST00000514610 RAPGEF6Q8TEU7 1601 aa-0.24□□□□□ -2.45
HMGCS1-207ENST00000514610 IFNGP01579 166 aa-0.24□□□□□ -2.45
HMGCS1-207ENST00000514610 KRTAP6-1Q3LI64 71 aa-0.24□□□□□ -2.45
HMGCS1-207ENST00000514610 PIGYQ3MUY2 71 aa-0.24□□□□□ -2.45
HMGCS1-207ENST00000514610 MRPL54Q6P161 138 aaKnown RBP-0.24□□□□□ -2.45
HMGCS1-207ENST00000514610 LINC00474Q9P2X8 69 aa-0.24□□□□□ -2.45
HMGCS1-207ENST00000514610 LINC01558Q9Y6Z2 57 aa-0.24□□□□□ -2.45
HMGCS1-207ENST00000514610 PRKDCP78527 4128 aaKnown RBP-0.24□□□□□ -2.45
HMGCS1-207ENST00000514610 ZFHX3Q15911 3703 aa-0.25□□□□□ -2.45
HMGCS1-207ENST00000514610 TRBV6-1A0A0K0K1D8 114 aa-0.25□□□□□ -2.45
HMGCS1-207ENST00000514610 C9orf153Q5TBE3 101 aa-0.25□□□□□ -2.45
HMGCS1-207ENST00000514610 PP6455Q8WZ26 134 aa-0.25□□□□□ -2.45
HMGCS1-207ENST00000514610 ARHGEF12Q9NZN5 1544 aa-0.25□□□□□ -2.45
HMGCS1-207ENST00000514610 ZANQ9Y493 2812 aa-0.26□□□□□ -2.45
HMGCS1-207ENST00000514610 MYOM2P54296 1465 aa-0.26□□□□□ -2.45
HMGCS1-207ENST00000514610 TNFP01375 233 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms