RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 VSIG2Q96IQ7 327 aa7.07□□□□□ -1.28
VCAN-210ENST00000513960 CELSR1Q9NYQ6 3014 aa7.07□□□□□ -1.28
VCAN-210ENST00000513960 CFAP46Q8IYW2 2715 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 HIST1H4AP62805 103 aaKnown RBP7.06□□□□□ -1.28
VCAN-210ENST00000513960 LINC01587Q99440 93 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 Q9UF83 564 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 TRBV6-5A0A0K0K1A5 114 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 hADV29S1A0JD25 119 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 TMEM89A2RUT3 159 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 SDIM1Q6ZPB5 146 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 SPANXA1Q9NS26 97 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 FLNCQ14315 2725 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 NDUFA7O95182 113 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 C3orf22Q8N5N4 141 aa7.06□□□□□ -1.28
VCAN-210ENST00000513960 LINC00467Q9BRT7 94 aa7.05□□□□□ -1.28
VCAN-210ENST00000513960 DEFB131AP59861 70 aa7.05□□□□□ -1.28
VCAN-210ENST00000513960 C11orf68Q9H3H3 251 aaKnown RBP7.05□□□□□ -1.28
VCAN-210ENST00000513960 TINCRA0A1B0GVN0 87 aa7.05□□□□□ -1.28
VCAN-210ENST00000513960 PIK3CD-AS1Q5SR53 167 aa7.04□□□□□ -1.28
VCAN-210ENST00000513960 LINC00643Q86TS7 51 aa7.04□□□□□ -1.28
VCAN-210ENST00000513960 A0A0J9YX75 114 aa7.04□□□□□ -1.28
VCAN-210ENST00000513960 CRPP02741 224 aa7.04□□□□□ -1.28
VCAN-210ENST00000513960 LINC00308Q8TCZ7 52 aa7.04□□□□□ -1.28
VCAN-210ENST00000513960 MYO9AB2RTY4 2548 aa7.04□□□□□ -1.28
VCAN-210ENST00000513960 A0A1B0GX51 115 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 IGSF10Q6WRI0 2623 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 K7EQG2 157 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 COX7A2LO14548 114 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 UQCRQO14949 82 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 ACYP1P07311 99 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 LINC00158P58513 81 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 C9orf85Q96MD7 179 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 LITAFQ99732 161 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 C14orf132Q9NPU4 83 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 ANKRD17O75179 2603 aaKnown RBP7.03□□□□□ -1.28
VCAN-210ENST00000513960 POLQO75417 2590 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 PRB1P04280 392 aa7.03□□□□□ -1.28
VCAN-210ENST00000513960 MRPS36P82909 103 aaKnown RBP7.03□□□□□ -1.28
VCAN-210ENST00000513960 Q8N2B8 174 aa7.02□□□□□ -1.28
VCAN-210ENST00000513960 J3KT08 172 aa7.02□□□□□ -1.29
VCAN-210ENST00000513960 TIRAPP58753 221 aa7.02□□□□□ -1.29
VCAN-210ENST00000513960 SMCR5Q8TEV8 140 aa7.02□□□□□ -1.29
VCAN-210ENST00000513960 PEMTQ9UBM1 199 aa7.02□□□□□ -1.29
VCAN-210ENST00000513960 PTPN13Q12923 2485 aa7.02□□□□□ -1.29
VCAN-210ENST00000513960 TRACP01848 142 aa7.02□□□□□ -1.29
VCAN-210ENST00000513960 ATP5G1P05496 136 aa7.02□□□□□ -1.29
VCAN-210ENST00000513960 UBE2E2Q96LR5 201 aa7.02□□□□□ -1.29
VCAN-210ENST00000513960 SETD2Q9BYW2 2564 aaPredicted RBP7.02□□□□□ -1.29
VCAN-210ENST00000513960 FAM240AA0A1B0GVK7 77 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 INAFM2P0DMQ5 153 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 ZFYVE26Q68DK2 2539 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 ZFHX3Q15911 3703 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 UBE2L6O14933 153 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 LRRK2Q5S007 2527 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 A0A087WVE0 104 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 TRBV7-7A0A0K0K1E9 115 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 PFN2P35080 140 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 Q6YL49 198 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 COPS9Q8WXC6 57 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 PKIGQ9Y2B9 76 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 VPS13CQ709C8 3753 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 TRGV1A0A0A0MS02 117 aa7.01□□□□□ -1.29
VCAN-210ENST00000513960 COX6A2Q02221 97 aa7□□□□□ -1.29
VCAN-210ENST00000513960 PAX4O43316 350 aa7□□□□□ -1.29
VCAN-210ENST00000513960 ZNF415Q09FC8 603 aa7□□□□□ -1.29
VCAN-210ENST00000513960 DEFB136Q30KP8 78 aa7□□□□□ -1.29
VCAN-210ENST00000513960 Q6ZSN1 163 aa7□□□□□ -1.29
VCAN-210ENST00000513960 FAM19A5Q7Z5A7 132 aaPredicted RBP7□□□□□ -1.29
VCAN-210ENST00000513960 ZNF702PQ9H963 129 aa7□□□□□ -1.29
VCAN-210ENST00000513960 UBE2D4Q9Y2X8 147 aa7□□□□□ -1.29
VCAN-210ENST00000513960 CSDC2Q9Y534 153 aaKnown RBP7□□□□□ -1.29
VCAN-210ENST00000513960 ZNF462Q96JM2 2506 aa7□□□□□ -1.29
VCAN-210ENST00000513960 NAV2Q8IVL1 2488 aa7□□□□□ -1.29
VCAN-210ENST00000513960 A0A096LNT2 108 aa7□□□□□ -1.29
VCAN-210ENST00000513960 HIST2H2BDQ6DRA6 164 aa7□□□□□ -1.29
VCAN-210ENST00000513960 DNAJC30Q96LL9 226 aa7□□□□□ -1.29
VCAN-210ENST00000513960 CRYBG3Q68DQ2 2970 aa6.99□□□□□ -1.29
VCAN-210ENST00000513960 IGHV4-31P0DP07 118 aa6.99□□□□□ -1.29
VCAN-210ENST00000513960 DYNLRB2Q8TF09 96 aa6.99□□□□□ -1.29
VCAN-210ENST00000513960 XCL2Q9UBD3 114 aa6.99□□□□□ -1.29
VCAN-210ENST00000513960 CENPEQ02224 2701 aa6.99□□□□□ -1.29
VCAN-210ENST00000513960 SLPIP03973 132 aa6.99□□□□□ -1.29
VCAN-210ENST00000513960 COX7CP15954 63 aa6.98□□□□□ -1.29
VCAN-210ENST00000513960 MALP21145 153 aa6.98□□□□□ -1.29
VCAN-210ENST00000513960 DSCR8Q96T75 97 aa6.98□□□□□ -1.29
VCAN-210ENST00000513960 CELSR2Q9HCU4 2923 aa6.98□□□□□ -1.29
VCAN-210ENST00000513960 ATOX1O00244 68 aa6.98□□□□□ -1.29
VCAN-210ENST00000513960 NDUFA1O15239 70 aa6.98□□□□□ -1.29
VCAN-210ENST00000513960 SLURP1P55000 103 aa6.98□□□□□ -1.29
VCAN-210ENST00000513960 PYGO1Q9Y3Y4 419 aa6.98□□□□□ -1.29
VCAN-210ENST00000513960 MRAPQ8TCY5 172 aa6.98□□□□□ -1.29
VCAN-210ENST00000513960 LECT2O14960 151 aa6.97□□□□□ -1.29
VCAN-210ENST00000513960 FAM218AQ96MZ4 157 aa6.97□□□□□ -1.29
VCAN-210ENST00000513960 MIR7-3HGQ8N6C7 128 aa6.97□□□□□ -1.29
VCAN-210ENST00000513960 LINC00526Q96FQ7 95 aa6.97□□□□□ -1.29
VCAN-210ENST00000513960 CHCHD7Q9BUK0 85 aa6.97□□□□□ -1.29
VCAN-210ENST00000513960 IMUPQ9GZP8 106 aa6.97□□□□□ -1.29
VCAN-210ENST00000513960 DEFB113Q30KQ7 82 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms